RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 LRIG2O94898 1065 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 KCNH1O95259 989 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 SEC24AO95486 1093 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 CCNA2P20248 432 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 GRM5P41594 1212 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 LIMK2P53671 638 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 SLC10A6Q3KNW5 377 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 NAT14Q8WUY8 206 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 TMEM159Q96B96 161 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 PAWRQ96IZ0 340 aaKnown RBP10.78□□□□□ -0.68
CCDC40-204ENST00000397545 EBF2Q9HAK2 575 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 PCDHB9Q9Y5E1 797 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 PTPRJQ12913 1337 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 TRAFD1O14545 582 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-204ENST00000397545 FGF10O15520 208 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-204ENST00000397545 ASNA1O43681 348 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 IPO13O94829 963 aaKnown RBP10.78□□□□□ -0.68
CCDC40-204ENST00000397545 COX7A2P14406 83 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 AXLP30530 894 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 CDK18Q07002 472 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 PSMD5Q16401 504 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 POM121L1PQ3SYA9 428 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 ARMC12Q5T9G4 340 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 CNSTQ6PJW8 725 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 SVOPQ8N4V2 548 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 POC5Q8NA72 575 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 ZNF540Q8NDQ6 660 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 YIPF2Q9BWQ6 316 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 SPATA16Q9BXB7 569 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 FAM126AQ9BYI3 521 aaPredicted RBP10.78□□□□□ -0.68
CCDC40-204ENST00000397545 R3HDMLQ9H3Y0 253 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 CNGB3Q9NQW8 809 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 C3orf18Q9UK00 162 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 GMPPBQ9Y5P6 360 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 DGKBQ9Y6T7 804 aa10.78□□□□□ -0.68
CCDC40-204ENST00000397545 NRCAMQ92823 1304 aa10.77□□□□□ -0.68
CCDC40-204ENST00000397545 TRIM43BA6NCK2 446 aa10.77□□□□□ -0.68
CCDC40-204ENST00000397545 TBKBP1A7MCY6 615 aa10.77□□□□□ -0.68
CCDC40-204ENST00000397545 ABLIM1O14639 778 aa10.77□□□□□ -0.68
CCDC40-204ENST00000397545 VPS4BO75351 444 aa10.77□□□□□ -0.68
CCDC40-204ENST00000397545 TTKP33981 857 aa10.77□□□□□ -0.68
CCDC40-204ENST00000397545 CHRNA4P43681 627 aa10.77□□□□□ -0.68
CCDC40-204ENST00000397545 ACTR3P61158 418 aa10.77□□□□□ -0.68
CCDC40-204ENST00000397545 BCL2L1Q07817 233 aa10.77□□□□□ -0.68
CCDC40-204ENST00000397545 MAD2L1Q13257 205 aaPredicted RBP10.77□□□□□ -0.68
CCDC40-204ENST00000397545 KLF1Q13351 362 aaPredicted RBP10.77□□□□□ -0.68
CCDC40-204ENST00000397545 SIM2Q14190 667 aaPredicted RBP10.77□□□□□ -0.68
CCDC40-204ENST00000397545 INSCQ1MX18 579 aa10.77□□□□□ -0.68
CCDC40-204ENST00000397545 DRICH1Q6PGQ1 229 aaPredicted RBP10.77□□□□□ -0.68
CCDC40-204ENST00000397545 NKAPQ8N5F7 415 aaKnown RBP10.77□□□□□ -0.68
CCDC40-204ENST00000397545 TSSK3Q96PN8 268 aa10.77□□□□□ -0.68
CCDC40-204ENST00000397545 ZYG11BQ9C0D3 744 aa10.77□□□□□ -0.68
CCDC40-204ENST00000397545 TMEM165Q9HC07 324 aa10.77□□□□□ -0.68
CCDC40-204ENST00000397545 ATXN10Q9UBB4 475 aa10.77□□□□□ -0.68
CCDC40-204ENST00000397545 ZNF180Q9UJW8 692 aa10.77□□□□□ -0.68
CCDC40-204ENST00000397545 ST3GAL5Q9UNP4 418 aa10.77□□□□□ -0.68
CCDC40-204ENST00000397545 DYRK1BQ9Y463 629 aa10.77□□□□□ -0.68
CCDC40-204ENST00000397545 CD3EAPO15446 510 aaKnown RBP10.77□□□□□ -0.69
CCDC40-204ENST00000397545 AQP1P29972 269 aa10.77□□□□□ -0.69
CCDC40-204ENST00000397545 OLIG2Q13516 323 aa10.77□□□□□ -0.69
CCDC40-204ENST00000397545 C1DQ13901 141 aaKnown RBP10.77□□□□□ -0.69
CCDC40-204ENST00000397545 TRIP4Q15650 581 aaPredicted RBP10.77□□□□□ -0.69
CCDC40-204ENST00000397545 IQSEC1Q6DN90 963 aa10.77□□□□□ -0.69
CCDC40-204ENST00000397545 ERAP2Q6P179 960 aa10.77□□□□□ -0.69
CCDC40-204ENST00000397545 SLC26A9Q7LBE3 791 aa10.77□□□□□ -0.69
CCDC40-204ENST00000397545 VN1R5Q7Z5H4 357 aa10.77□□□□□ -0.69
CCDC40-204ENST00000397545 EZH1Q92800 747 aaPredicted RBP10.77□□□□□ -0.69
CCDC40-204ENST00000397545 LINGO1Q96FE5 620 aa10.77□□□□□ -0.69
CCDC40-204ENST00000397545 FZD9O00144 591 aa10.77□□□□□ -0.69
CCDC40-204ENST00000397545 SNAP91O60641 907 aa10.77□□□□□ -0.69
CCDC40-204ENST00000397545 GPR15P49685 360 aa10.77□□□□□ -0.69
CCDC40-204ENST00000397545 SLC9B1Q4ZJI4 515 aa10.77□□□□□ -0.69
CCDC40-204ENST00000397545 METTL21CQ5VZV1 264 aa10.77□□□□□ -0.69
CCDC40-204ENST00000397545 ZNF605Q86T29 641 aa10.77□□□□□ -0.69
CCDC40-204ENST00000397545 ZDHHC14Q8IZN3 488 aa10.77□□□□□ -0.69
CCDC40-204ENST00000397545 TBC1D19Q8N5T2 526 aa10.77□□□□□ -0.69
CCDC40-204ENST00000397545 DCAKDQ8WVC6 231 aa10.77□□□□□ -0.69
CCDC40-204ENST00000397545 CAPSLQ8WWF8 208 aa10.77□□□□□ -0.69
CCDC40-204ENST00000397545 MLPHQ9BV36 600 aaPredicted RBP10.77□□□□□ -0.69
CCDC40-204ENST00000397545 PCDH12Q9NPG4 1184 aa10.77□□□□□ -0.69
CCDC40-204ENST00000397545 TMA7Q9Y2S6 64 aaKnown RBP10.77□□□□□ -0.69
CCDC40-204ENST00000397545 NT5C1B-RDH14C9J2C7 533 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 H7C4K7 107 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 AP2A1O95782 977 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 ANXA6P08133 673 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 NCK1P16333 377 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 CRATP43155 626 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 GPD2P43304 727 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 CCR3P51677 355 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 IRF9Q00978 393 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 FAM187BQ17R55 369 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 PPM1LQ5SGD2 360 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 HECTD2Q5U5R9 776 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 PAOXQ6QHF9 649 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 DENND1CQ8IV53 801 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 PGAM4Q8N0Y7 254 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 GPR156Q8NFN8 814 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 RDH11Q8TC12 318 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 RNFT2Q96EX2 444 aa10.76□□□□□ -0.69
CCDC40-204ENST00000397545 B3GALT6Q96L58 329 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms