RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 NAA35Q5VZE5 725 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 AFMIDQ63HM1 303 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 HIST2H2BCQ6DN03 193 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 TMEM71Q6P5X7 295 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 NAGSQ8N159 534 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 PELI3Q8N2H9 469 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 BMPERQ8N8U9 685 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 GPT2Q8TD30 523 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 PATE1Q8WXA2 126 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 CENPIQ92674 756 aaPredicted RBP14.98□□□□□ -0.01
SEC13-206ENST00000397102 RTP4Q96DX8 246 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 ATP13A3Q9H7F0 1226 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 PDFQ9HBH1 243 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 TMEM9Q9P0T7 183 aa14.98□□□□□ -0.01
SEC13-206ENST00000397102 PLEKHB1Q9UF11 243 aaPredicted RBP14.98□□□□□ -0.01
SEC13-206ENST00000397102 WASH4PA8MWX3 477 aa14.97□□□□□ -0.01
SEC13-206ENST00000397102 PPM1DO15297 605 aa14.97□□□□□ -0.01
SEC13-206ENST00000397102 MPSTP25325 297 aa14.97□□□□□ -0.01
SEC13-206ENST00000397102 AK4P27144 223 aaPredicted RBP14.97□□□□□ -0.01
SEC13-206ENST00000397102 MAN1A1P33908 653 aa14.97□□□□□ -0.01
SEC13-206ENST00000397102 CSNK1DP48730 415 aa14.97□□□□□ -0.01
SEC13-206ENST00000397102 GPLD1P80108 840 aa14.97□□□□□ -0.01
SEC13-206ENST00000397102 ABHD18Q0P651 414 aa14.97□□□□□ -0.01
SEC13-206ENST00000397102 DPPA4Q7L190 304 aa14.97□□□□□ -0.01
SEC13-206ENST00000397102 NOP9Q86U38 636 aaKnown RBP14.97□□□□□ -0.01
SEC13-206ENST00000397102 UMODL1-AS1Q8N2C9 162 aa14.97□□□□□ -0.01
SEC13-206ENST00000397102 JOSD2Q8TAC2 188 aa14.97□□□□□ -0.01
SEC13-206ENST00000397102 FAM172AQ8WUF8 416 aa14.97□□□□□ -0.01
SEC13-206ENST00000397102 STARD8Q92502 1023 aa14.97□□□□□ -0.01
SEC13-206ENST00000397102 ECHDC3Q96DC8 303 aa14.97□□□□□ -0.01
SEC13-206ENST00000397102 SUDS3Q9H7L9 328 aaPredicted RBP14.97□□□□□ -0.01
SEC13-206ENST00000397102 PHPT1Q9NRX4 125 aaPredicted RBP14.97□□□□□ -0.01
SEC13-206ENST00000397102 KCNK4Q9NYG8 393 aa14.97□□□□□ -0.01
SEC13-206ENST00000397102 PDP2Q9P2J9 529 aa14.97□□□□□ -0.01
SEC13-206ENST00000397102 RWDD2AQ9UIY3 292 aa14.97□□□□□ -0.01
SEC13-206ENST00000397102 TP53TG5Q9Y2B4 290 aa14.97□□□□□ -0.01
SEC13-206ENST00000397102 ENO4A6NNW6 628 aa14.96□□□□□ -0.01
SEC13-206ENST00000397102 FUCA1P04066 466 aa14.96□□□□□ -0.01
SEC13-206ENST00000397102 CEACAM5P06731 702 aa14.96□□□□□ -0.01
SEC13-206ENST00000397102 MMEP08473 750 aa14.96□□□□□ -0.01
SEC13-206ENST00000397102 MTIF2P46199 727 aaKnown RBP14.96□□□□□ -0.01
SEC13-206ENST00000397102 GNPDA1P46926 289 aa14.96□□□□□ -0.01
SEC13-206ENST00000397102 POLR2LP62875 67 aaKnown RBP14.96□□□□□ -0.01
SEC13-206ENST00000397102 ACOX1Q15067 660 aa14.96□□□□□ -0.01
SEC13-206ENST00000397102 DPY19L2P1Q6NXN4 242 aa14.96□□□□□ -0.01
SEC13-206ENST00000397102 SLC30A9Q6PML9 568 aa14.96□□□□□ -0.01
SEC13-206ENST00000397102 CEACAM20Q6UY09 585 aa14.96□□□□□ -0.01
SEC13-206ENST00000397102 SLFN11Q7Z7L1 901 aa14.96□□□□□ -0.01
SEC13-206ENST00000397102 SRLQ86TD4 932 aa14.96□□□□□ -0.01
SEC13-206ENST00000397102 PYROXD2Q8N2H3 581 aa14.96□□□□□ -0.01
SEC13-206ENST00000397102 ZPBPQ9BS86 351 aa14.96□□□□□ -0.01
SEC13-206ENST00000397102 TEX101Q9BY14 249 aa14.96□□□□□ -0.01
SEC13-206ENST00000397102 FRMD8Q9BZ67 464 aaPredicted RBP14.96□□□□□ -0.01
SEC13-206ENST00000397102 ZMYND15Q9H091 742 aa14.96□□□□□ -0.01
SEC13-206ENST00000397102 TRIT1Q9H3H1 467 aaKnown RBP14.96□□□□□ -0.01
SEC13-206ENST00000397102 CATSPERBQ9H7T0 1116 aa14.96□□□□□ -0.01
SEC13-206ENST00000397102 UNC79Q9P2D8 2635 aa14.96□□□□□ -0.01
SEC13-206ENST00000397102 FHOD1Q9Y613 1164 aa14.96□□□□□ -0.01
SEC13-206ENST00000397102 KRT7P08729 469 aa14.95□□□□□ -0.02
SEC13-206ENST00000397102 TCN2P20062 427 aa14.95□□□□□ -0.02
SEC13-206ENST00000397102 MMP8P22894 467 aa14.95□□□□□ -0.02
SEC13-206ENST00000397102 ERCC5P28715 1186 aaPredicted RBP14.95□□□□□ -0.02
SEC13-206ENST00000397102 RGRP47804 291 aa14.95□□□□□ -0.02
SEC13-206ENST00000397102 MLLT10P55197 1068 aa14.95□□□□□ -0.02
SEC13-206ENST00000397102 CTBSQ01459 385 aa14.95□□□□□ -0.02
SEC13-206ENST00000397102 MC2RQ01718 297 aa14.95□□□□□ -0.02
SEC13-206ENST00000397102 MAN2A1Q16706 1144 aa14.95□□□□□ -0.02
SEC13-206ENST00000397102 TIPARPQ7Z3E1 657 aaKnown RBP14.95□□□□□ -0.02
SEC13-206ENST00000397102 PHLDB2Q86SQ0 1253 aa14.95□□□□□ -0.02
SEC13-206ENST00000397102 HEATR4Q86WZ0 1026 aa14.95□□□□□ -0.02
SEC13-206ENST00000397102 UNC5BQ8IZJ1 945 aa14.95□□□□□ -0.02
SEC13-206ENST00000397102 TEX19Q8NA77 164 aa14.95□□□□□ -0.02
SEC13-206ENST00000397102 EPS8L1Q8TE68 723 aa14.95□□□□□ -0.02
SEC13-206ENST00000397102 NUS1Q96E22 293 aa14.95□□□□□ -0.02
SEC13-206ENST00000397102 COQ10AQ96MF6 247 aa14.95□□□□□ -0.02
SEC13-206ENST00000397102 KCTD5Q9NXV2 234 aa14.95□□□□□ -0.02
SEC13-206ENST00000397102 SUFUQ9UMX1 484 aa14.95□□□□□ -0.02
SEC13-206ENST00000397102 TMEM184BQ9Y519 407 aaPredicted RBP14.95□□□□□ -0.02
SEC13-206ENST00000397102 KCTD3Q9Y597 815 aa14.95□□□□□ -0.02
SEC13-206ENST00000397102 ST14Q9Y5Y6 855 aa14.95□□□□□ -0.02
SEC13-206ENST00000397102 SPENQ96T58 3664 aaKnown RBP14.95□□□□□ -0.02
SEC13-206ENST00000397102 UTP20O75691 2785 aaKnown RBP14.95□□□□□ -0.02
SEC13-206ENST00000397102 J3KR12 359 aa14.94□□□□□ -0.02
SEC13-206ENST00000397102 FGF10O15520 208 aaPredicted RBP14.94□□□□□ -0.02
SEC13-206ENST00000397102 CREB3O43889 395 aa14.94□□□□□ -0.02
SEC13-206ENST00000397102 PRAMEF11O60813 436 aa14.94□□□□□ -0.02
SEC13-206ENST00000397102 AGFG2O95081 481 aa14.94□□□□□ -0.02
SEC13-206ENST00000397102 BCL2L1Q07817 233 aa14.94□□□□□ -0.02
SEC13-206ENST00000397102 TCTN3Q6NUS6 607 aa14.94□□□□□ -0.02
SEC13-206ENST00000397102 C16orf46Q6P387 395 aa14.94□□□□□ -0.02
SEC13-206ENST00000397102 KDELC2Q7Z4H8 507 aa14.94□□□□□ -0.02
SEC13-206ENST00000397102 ZNF677Q86XU0 584 aa14.94□□□□□ -0.02
SEC13-206ENST00000397102 PAF1Q8N7H5 531 aa14.94□□□□□ -0.02
SEC13-206ENST00000397102 TSEN2Q8NCE0 465 aaKnown RBP14.94□□□□□ -0.02
SEC13-206ENST00000397102 AHCYL2Q96HN2 611 aaKnown RBP14.94□□□□□ -0.02
SEC13-206ENST00000397102 CTRCQ99895 268 aa14.94□□□□□ -0.02
SEC13-206ENST00000397102 C11orf70Q9BRQ4 267 aa14.94□□□□□ -0.02
SEC13-206ENST00000397102 NAA15Q9BXJ9 866 aaKnown RBP14.94□□□□□ -0.02
SEC13-206ENST00000397102 LRRC19Q9H756 370 aa14.94□□□□□ -0.02
SEC13-206ENST00000397102 FBXO8Q9NRD0 319 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms