RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 CYP4F12Q9HCS2 524 aa18.32■□□□□ 0.52
FXN-203ENST00000396366 SPTLC3Q9NUV7 552 aa18.32■□□□□ 0.52
FXN-203ENST00000396366 MOSPD1Q9UJG1 213 aa18.32■□□□□ 0.52
FXN-203ENST00000396366 A0A1W2PQ67 120 aa18.31■□□□□ 0.52
FXN-203ENST00000396366 MATN3O15232 486 aa18.31■□□□□ 0.52
FXN-203ENST00000396366 CBFA2T2O43439 604 aa18.31■□□□□ 0.52
FXN-203ENST00000396366 AKR1B10O60218 316 aa18.31■□□□□ 0.52
FXN-203ENST00000396366 FZD6O60353 706 aa18.31■□□□□ 0.52
FXN-203ENST00000396366 HOXC4P09017 264 aaPredicted RBP18.31■□□□□ 0.52
FXN-203ENST00000396366 TMEM253P0C7T8 217 aa18.31■□□□□ 0.52
FXN-203ENST00000396366 ACTN2P35609 894 aa18.31■□□□□ 0.52
FXN-203ENST00000396366 CCDC173Q0VFZ6 552 aa18.31■□□□□ 0.52
FXN-203ENST00000396366 PDK2Q15119 407 aa18.31■□□□□ 0.52
FXN-203ENST00000396366 ARMC12Q5T9G4 340 aa18.31■□□□□ 0.52
FXN-203ENST00000396366 GKN2Q86XP6 184 aa18.31■□□□□ 0.52
FXN-203ENST00000396366 LRRC49Q8IUZ0 686 aa18.31■□□□□ 0.52
FXN-203ENST00000396366 SNIP1Q8TAD8 396 aaKnown RBP18.31■□□□□ 0.52
FXN-203ENST00000396366 MAML1Q92585 1016 aa18.31■□□□□ 0.52
FXN-203ENST00000396366 CCDC74AQ96AQ1 378 aa18.31■□□□□ 0.52
FXN-203ENST00000396366 FAF2Q96CS3 445 aa18.31■□□□□ 0.52
FXN-203ENST00000396366 ZNF670Q9BS34 389 aa18.31■□□□□ 0.52
FXN-203ENST00000396366 WDR26Q9H7D7 661 aa18.31■□□□□ 0.52
FXN-203ENST00000396366 SUDS3Q9H7L9 328 aaPredicted RBP18.31■□□□□ 0.52
FXN-203ENST00000396366 SYNDIG1Q9H7V2 258 aa18.31■□□□□ 0.52
FXN-203ENST00000396366 ABHD10Q9NUJ1 306 aa18.31■□□□□ 0.52
FXN-203ENST00000396366 RBM22Q9NW64 420 aaKnown RBP eCLIP18.31■□□□□ 0.524e-7■■□□□ 11.6
FXN-203ENST00000396366 CD84Q9UIB8 345 aa18.31■□□□□ 0.52
FXN-203ENST00000396366 SATB2Q9UPW6 733 aa18.31■□□□□ 0.52
FXN-203ENST00000396366 ENTPD2Q9Y5L3 495 aa18.31■□□□□ 0.52
FXN-203ENST00000396366 SSU72P8A0A1W2PR75 194 aa18.3■□□□□ 0.52
FXN-203ENST00000396366 KRT7P08729 469 aa18.3■□□□□ 0.52
FXN-203ENST00000396366 CYP2A6P11509 494 aaPredicted RBP18.3■□□□□ 0.52
FXN-203ENST00000396366 KDELR1P24390 212 aa18.3■□□□□ 0.52
FXN-203ENST00000396366 ABCG1P45844 678 aa18.3■□□□□ 0.52
FXN-203ENST00000396366 LSSP48449 732 aa18.3■□□□□ 0.52
FXN-203ENST00000396366 POLD2P49005 469 aa18.3■□□□□ 0.52
FXN-203ENST00000396366 PDX1P52945 283 aa18.3■□□□□ 0.52
FXN-203ENST00000396366 CCL7P80098 99 aa18.3■□□□□ 0.52
FXN-203ENST00000396366 NIPAL4Q0D2K0 466 aa18.3■□□□□ 0.52
FXN-203ENST00000396366 SOWAHCQ53LP3 525 aaPredicted RBP18.3■□□□□ 0.52
FXN-203ENST00000396366 C3orf38Q5JPI3 329 aa18.3■□□□□ 0.52
FXN-203ENST00000396366 RALGPS1Q5JS13 557 aa18.3■□□□□ 0.52
FXN-203ENST00000396366 ZFYVE27Q5T4F4 411 aa18.3■□□□□ 0.52
FXN-203ENST00000396366 RBM44Q6ZP01 1051 aaKnown RBP18.3■□□□□ 0.52
FXN-203ENST00000396366 TAF8Q7Z7C8 310 aa18.3■□□□□ 0.52
FXN-203ENST00000396366 HEATR4Q86WZ0 1026 aa18.3■□□□□ 0.52
FXN-203ENST00000396366 FAM46DQ8NEK8 389 aa18.3■□□□□ 0.52
FXN-203ENST00000396366 NAT6Q93015 286 aa18.3■□□□□ 0.52
FXN-203ENST00000396366 DTD2Q96FN9 168 aa18.3■□□□□ 0.52
FXN-203ENST00000396366 NAF1Q96HR8 494 aaKnown RBP18.3■□□□□ 0.52
FXN-203ENST00000396366 MCCC1Q96RQ3 725 aaPredicted RBP18.3■□□□□ 0.52
FXN-203ENST00000396366 POLR1EQ9GZS1 481 aaKnown RBP18.3■□□□□ 0.52
FXN-203ENST00000396366 NHEJ1Q9H9Q4 299 aaPredicted RBP18.3■□□□□ 0.52
FXN-203ENST00000396366 POLR1BQ9H9Y6 1135 aa18.3■□□□□ 0.52
FXN-203ENST00000396366 PPIL1Q9Y3C6 166 aa18.3■□□□□ 0.52
FXN-203ENST00000396366 TTLL3Q9Y4R7 772 aa18.3■□□□□ 0.52
FXN-203ENST00000396366 GOLGA6CA6NDK9 693 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 GOLGA6BA6NDN3 693 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 TNFRSF10CO14798 259 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 RRP8O43159 456 aaKnown RBP18.29■□□□□ 0.52
FXN-203ENST00000396366 MFAP3LO75121 409 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 HLA-DQB2P05538 268 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 CEACAM5P06731 702 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 GOLGA6DP0CG33 693 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 MYCLP1P12525 358 aaPredicted RBP18.29■□□□□ 0.52
FXN-203ENST00000396366 CCNB1P14635 433 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 CCNCP24863 283 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 TRIM14Q14142 442 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 ARHGEF7Q14155 803 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 IFI16Q16666 785 aaKnown RBP18.29■□□□□ 0.52
FXN-203ENST00000396366 FOXR1Q6PIV2 292 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 LRRC69Q6ZNQ3 347 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 TECPR1Q7Z6L1 1165 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 MAP7D3Q8IWC1 876 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 SDR16C5Q8N3Y7 309 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 TPCN2Q8NHX9 752 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 ARRDC2Q8TBH0 407 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 BBC3Q96PG8 261 aaPredicted RBP18.29■□□□□ 0.52
FXN-203ENST00000396366 TSGA13Q96PP4 275 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 TEX101Q9BY14 249 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 ZNHIT6Q9NWK9 470 aaKnown RBP18.29■□□□□ 0.52
FXN-203ENST00000396366 GOLGA6AQ9NYA3 693 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 DTLQ9NZJ0 730 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 CHKBQ9Y259 395 aa18.29■□□□□ 0.52
FXN-203ENST00000396366 SMG1Q96Q15 3661 aaKnown RBP18.28■□□□□ 0.52
FXN-203ENST00000396366 PRSS38A1L453 326 aa18.28■□□□□ 0.52
FXN-203ENST00000396366 C3orf70A6NLC5 250 aaPredicted RBP18.28■□□□□ 0.52
FXN-203ENST00000396366 NTN3O00634 580 aaPredicted RBP18.28■□□□□ 0.52
FXN-203ENST00000396366 NOBOXO60393 691 aa18.28■□□□□ 0.52
FXN-203ENST00000396366 PRLP01236 227 aa18.28■□□□□ 0.52
FXN-203ENST00000396366 KELP23276 732 aa18.28■□□□□ 0.52
FXN-203ENST00000396366 MAN1A1P33908 653 aa18.28■□□□□ 0.52
FXN-203ENST00000396366 PTSQ03393 145 aa18.28■□□□□ 0.52
FXN-203ENST00000396366 LRRC66Q68CR7 880 aa18.28■□□□□ 0.52
FXN-203ENST00000396366 OGFOD3Q6PK18 319 aa18.28■□□□□ 0.52
FXN-203ENST00000396366 B3GNT8Q7Z7M8 397 aa18.28■□□□□ 0.52
FXN-203ENST00000396366 Q8N9G6 341 aaPredicted RBP18.28■□□□□ 0.52
FXN-203ENST00000396366 CCNYQ8ND76 341 aa18.28■□□□□ 0.52
FXN-203ENST00000396366 GPR156Q8NFN8 814 aa18.28■□□□□ 0.52
FXN-203ENST00000396366 PRR11Q96HE9 360 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms