RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 DPYSL2Q16555 572 aa16.39■□□□□ 0.21
DDR1-229ENST00000396342 CLPPQ16740 277 aaPredicted RBP16.39■□□□□ 0.21
DDR1-229ENST00000396342 SMTNL2Q2TAL5 461 aa16.39■□□□□ 0.21
DDR1-229ENST00000396342 SPECC1LQ69YQ0 1117 aa16.39■□□□□ 0.21
DDR1-229ENST00000396342 TIGD7Q6NT04 549 aaPredicted RBP16.39■□□□□ 0.21
DDR1-229ENST00000396342 ARHGAP12Q8IWW6 846 aa16.39■□□□□ 0.21
DDR1-229ENST00000396342 PLA2G15Q8NCC3 412 aa16.39■□□□□ 0.21
DDR1-229ENST00000396342 GPR156Q8NFN8 814 aa16.39■□□□□ 0.21
DDR1-229ENST00000396342 TEKT4Q8WW24 435 aa16.39■□□□□ 0.21
DDR1-229ENST00000396342 PRR11Q96HE9 360 aaPredicted RBP16.39■□□□□ 0.21
DDR1-229ENST00000396342 PEBP4Q96S96 227 aa16.39■□□□□ 0.21
DDR1-229ENST00000396342 TMEM168Q9H0V1 697 aa16.39■□□□□ 0.21
DDR1-229ENST00000396342 STN1Q9H668 368 aaKnown RBP16.39■□□□□ 0.21
DDR1-229ENST00000396342 FGF22Q9HCT0 170 aa16.39■□□□□ 0.21
DDR1-229ENST00000396342 LCMT1Q9UIC8 334 aa16.39■□□□□ 0.21
DDR1-229ENST00000396342 HEMK1Q9Y5R4 338 aaPredicted RBP16.39■□□□□ 0.21
DDR1-229ENST00000396342 K7ENP7 123 aa16.38■□□□□ 0.21
DDR1-229ENST00000396342 CCNB1P14635 433 aa16.38■□□□□ 0.21
DDR1-229ENST00000396342 AMPD1P23109 780 aa16.38■□□□□ 0.21
DDR1-229ENST00000396342 CD82P27701 267 aa16.38■□□□□ 0.21
DDR1-229ENST00000396342 GPR1P46091 355 aa16.38■□□□□ 0.21
DDR1-229ENST00000396342 GNPDA1P46926 289 aa16.38■□□□□ 0.21
DDR1-229ENST00000396342 RALGDSQ12967 914 aa16.38■□□□□ 0.21
DDR1-229ENST00000396342 AMZ1Q400G9 498 aa16.38■□□□□ 0.21
DDR1-229ENST00000396342 MANEAQ5SRI9 462 aa16.38■□□□□ 0.21
DDR1-229ENST00000396342 INO80CQ6PI98 192 aaPredicted RBP16.38■□□□□ 0.21
DDR1-229ENST00000396342 OGFOD3Q6PK18 319 aa16.38■□□□□ 0.21
DDR1-229ENST00000396342 XKR5Q6UX68 686 aa16.38■□□□□ 0.21
DDR1-229ENST00000396342 ARHGAP36Q6ZRI8 547 aa16.38■□□□□ 0.21
DDR1-229ENST00000396342 APTXQ7Z2E3 356 aaKnown RBP16.38■□□□□ 0.21
DDR1-229ENST00000396342 HEATR4Q86WZ0 1026 aa16.38■□□□□ 0.21
DDR1-229ENST00000396342 ZSWIM9Q86XI8 627 aa16.38■□□□□ 0.21
DDR1-229ENST00000396342 NPWQ8N729 165 aa16.38■□□□□ 0.21
DDR1-229ENST00000396342 ZDHHC1Q8WTX9 485 aa16.38■□□□□ 0.21
DDR1-229ENST00000396342 ZNF830Q96NB3 372 aaPredicted RBP16.38■□□□□ 0.21
DDR1-229ENST00000396342 CSPG4P5Q96PW8 444 aa16.38■□□□□ 0.21
DDR1-229ENST00000396342 DPYSL5Q9BPU6 564 aa16.38■□□□□ 0.21
DDR1-229ENST00000396342 POLR1EQ9GZS1 481 aaKnown RBP16.38■□□□□ 0.21
DDR1-229ENST00000396342 MRPL40Q9NQ50 206 aaKnown RBP16.38■□□□□ 0.21
DDR1-229ENST00000396342 TRNAU1APQ9NX07 287 aaKnown RBP16.38■□□□□ 0.21
DDR1-229ENST00000396342 RCOR3Q9P2K3 495 aaPredicted RBP16.38■□□□□ 0.21
DDR1-229ENST00000396342 ANAPC7Q9UJX3 599 aa16.38■□□□□ 0.21
DDR1-229ENST00000396342 ATXN7L1Q9ULK2 861 aaPredicted RBP16.38■□□□□ 0.21
DDR1-229ENST00000396342 PNMA8BQ9ULN7 279 aaPredicted RBP16.38■□□□□ 0.21
DDR1-229ENST00000396342 TTLL3Q9Y4R7 772 aa16.38■□□□□ 0.21
DDR1-229ENST00000396342 DOCK4Q8N1I0 1966 aa16.38■□□□□ 0.21
DDR1-229ENST00000396342 ARID1BQ8NFD5 2236 aaPredicted RBP16.38■□□□□ 0.21
DDR1-229ENST00000396342 DDX3XO00571 662 aaKnown RBP eCLIP16.37■□□□□ 0.214e-8■■■■■ 37
DDR1-229ENST00000396342 TRAFD1O14545 582 aaPredicted RBP16.37■□□□□ 0.21
DDR1-229ENST00000396342 NVLO15381 856 aaKnown RBP16.37■□□□□ 0.21
DDR1-229ENST00000396342 HEXIM1O94992 359 aaKnown RBP16.37■□□□□ 0.21
DDR1-229ENST00000396342 CPNE6O95741 557 aa16.37■□□□□ 0.21
DDR1-229ENST00000396342 SKILP12757 684 aa16.37■□□□□ 0.21
DDR1-229ENST00000396342 MAPK10P53779 464 aa16.37■□□□□ 0.21
DDR1-229ENST00000396342 ODF2Q5BJF6 829 aa16.37■□□□□ 0.21
DDR1-229ENST00000396342 CAVIN1Q6NZI2 390 aaKnown RBP16.37■□□□□ 0.21
DDR1-229ENST00000396342 POLNQ7Z5Q5 900 aa16.37■□□□□ 0.21
DDR1-229ENST00000396342 SPRED1Q7Z699 444 aa16.37■□□□□ 0.21
DDR1-229ENST00000396342 ZNF843Q8N446 348 aa16.37■□□□□ 0.21
DDR1-229ENST00000396342 KCTD6Q8NC69 237 aa16.37■□□□□ 0.21
DDR1-229ENST00000396342 SPOCK2Q92563 424 aa16.37■□□□□ 0.21
DDR1-229ENST00000396342 SYN2Q92777 582 aaPredicted RBP16.37■□□□□ 0.21
DDR1-229ENST00000396342 VOPP1Q96AW1 172 aa16.37■□□□□ 0.21
DDR1-229ENST00000396342 SCRN2Q96FV2 425 aa16.37■□□□□ 0.21
DDR1-229ENST00000396342 AHCYL2Q96HN2 611 aaKnown RBP16.37■□□□□ 0.21
DDR1-229ENST00000396342 COQ10AQ96MF6 247 aa16.37■□□□□ 0.21
DDR1-229ENST00000396342 SYT11Q9BT88 431 aa16.37■□□□□ 0.21
DDR1-229ENST00000396342 ISCUQ9H1K1 167 aa16.37■□□□□ 0.21
DDR1-229ENST00000396342 NOD2Q9HC29 1040 aa16.37■□□□□ 0.21
DDR1-229ENST00000396342 NT5MQ9NPB1 228 aa16.37■□□□□ 0.21
DDR1-229ENST00000396342 RNF215Q9Y6U7 377 aa16.37■□□□□ 0.21
DDR1-229ENST00000396342 A0A1B0GTH6 734 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 HTRA2O43464 458 aaPredicted RBP16.36■□□□□ 0.21
DDR1-229ENST00000396342 SERPING1P05155 500 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 RARAP10276 462 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 LIPCP11150 499 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 SFTPCP11686 197 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 ZNF30P17039 623 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 MX2P20592 715 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 TEAD1P28347 426 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 ETV3P41162 512 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 ATP1A2P50993 1020 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 CLN3Q13286 438 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 CNGA3Q16281 694 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 FIGNQ5HY92 759 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 SLC30A9Q6PML9 568 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 B3GNT8Q7Z7M8 397 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 ARFGAP1Q8N6T3 406 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 SNRNP27Q8WVK2 155 aaKnown RBP16.36■□□□□ 0.21
DDR1-229ENST00000396342 DTD2Q96FN9 168 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 MED8Q96G25 268 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 MGME1Q9BQP7 344 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 NUP85Q9BW27 656 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 TEX101Q9BY14 249 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 TRIM7Q9C029 511 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 FAM117AQ9C073 453 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 LUC7L2Q9Y383 392 aaKnown RBP16.36■□□□□ 0.21
DDR1-229ENST00000396342 IGSF10Q6WRI0 2623 aa16.36■□□□□ 0.21
DDR1-229ENST00000396342 A0A1W2PQJ5 194 aa16.35■□□□□ 0.21
DDR1-229ENST00000396342 J3QKU1 62 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms