RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ABL2P42684 1182 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 CXCR3P49682 368 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 RPL38P63173 70 aaKnown RBP5.46□□□□□ -1.54
VPS13C-204ENST00000395898 AUHQ13825 339 aaKnown RBP5.46□□□□□ -1.54
VPS13C-204ENST00000395898 CBX2Q14781 532 aaPredicted RBP5.46□□□□□ -1.54
VPS13C-204ENST00000395898 TAF5Q15542 800 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 TPSAB1Q15661 275 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 TATDN1Q6P1N9 297 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 ARMC8Q8IUR7 673 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 ZFPM1Q8IX07 1006 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 RTKNQ9BST9 563 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 PCDHGC3Q9UN70 934 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 MYH7BA7E2Y1 1941 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 FKTNO75072 461 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 C1RP00736 705 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 NR2F6P10588 404 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 TNFSF9P41273 254 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 BCAP31P51572 246 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 ATP1A4Q13733 1029 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 DEFB115Q30KQ5 88 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 MPPE1Q53F39 396 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 AAGABQ6PD74 315 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 SLC24A5Q71RS6 500 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 ANKRD23Q86SG2 305 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 BPIFB6Q8NFQ5 453 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 SEMA6AQ9H2E6 1030 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 CLK4Q9HAZ1 481 aaKnown RBP5.46□□□□□ -1.54
VPS13C-204ENST00000395898 FBXO5Q9UKT4 447 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 PHLPP1O60346 1717 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 PAGE1O75459 146 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 CXCL14O95715 111 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 IGFALSP35858 605 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 RPL4P36578 427 aaKnown RBP5.46□□□□□ -1.54
VPS13C-204ENST00000395898 PKNOX1P55347 436 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 ITGADQ13349 1161 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 PRAMEF19Q5SWL8 479 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 RNF44Q7L0R7 432 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 C10orf107Q8IVU9 208 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 CPA6Q8N4T0 437 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 PCDH20Q8N6Y1 951 aaKnown RBP5.46□□□□□ -1.54
VPS13C-204ENST00000395898 PRELID2Q8N945 189 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 OR52K2Q8NGK3 314 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.46□□□□□ -1.54
VPS13C-204ENST00000395898 PGK1P00558 417 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 CHRNGP07510 517 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 DUSP4Q13115 394 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 DGCR6Q14129 220 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 FAM110CQ1W6H9 321 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 LCLAT1Q6UWP7 414 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 ELMO3Q96BJ8 720 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 FCRL2Q96LA5 508 aaPredicted RBP5.46□□□□□ -1.54
VPS13C-204ENST00000395898 FNDC11Q9BVV2 318 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 LMAN2LQ9H0V9 348 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 BPIFA1Q9NP55 256 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 GULP1Q9UBP9 304 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 GPN3Q9UHW5 284 aaPredicted RBP5.46□□□□□ -1.54
VPS13C-204ENST00000395898 RBM47A0AV96 593 aaKnown RBP5.46□□□□□ -1.54
VPS13C-204ENST00000395898 UBE2QL1A1L167 161 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 CCDC162PA2VCL2 907 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 YDJCA8MPS7 323 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 KLRC4O43908 158 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 OR10H3O60404 316 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 BUD31P41223 144 aaPredicted RBP5.46□□□□□ -1.54
VPS13C-204ENST00000395898 LAPTM5Q13571 262 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 DUSP28Q4G0W2 176 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 AADACL2Q6P093 401 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 ABHD15Q6UXT9 468 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 FBXW8Q8N3Y1 598 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 PJA1Q8NG27 643 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 EEF1AKMT1Q8WVE0 214 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 AIF1LQ9BQI0 150 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 BCL2L14Q9BZR8 327 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 GBA3Q9H227 469 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 EPB41L1Q9H4G0 881 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 CHD2O14647 1828 aaKnown RBP5.46□□□□□ -1.54
VPS13C-204ENST00000395898 ARFGEF2Q9Y6D5 1785 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 ISM1B1AKI9 464 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 HAT1O14929 419 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 AZIN1O14977 448 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 MDM4O15151 490 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 SUV39H1O43463 412 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 TMCC2O75069 709 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 GJB6O95452 261 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 CD52P31358 61 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 FAUP35544 74 aaKnown RBP5.46□□□□□ -1.54
VPS13C-204ENST00000395898 PTPN9P43378 593 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 ADARP55265 1226 aaKnown RBP5.46□□□□□ -1.54
VPS13C-204ENST00000395898 YBEYP58557 167 aaPredicted RBP5.46□□□□□ -1.54
VPS13C-204ENST00000395898 SMAD3P84022 425 aaKnown RBP5.46□□□□□ -1.54
VPS13C-204ENST00000395898 SPIBQ01892 262 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 ELP6Q0PNE2 266 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 ACAP2Q15057 778 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 KIAA1324Q6UXG2 1013 aaKnown RBP5.46□□□□□ -1.54
VPS13C-204ENST00000395898 LRRC55Q6ZSA7 311 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 TSEN2Q8NCE0 465 aaKnown RBP5.46□□□□□ -1.54
VPS13C-204ENST00000395898 PIK3C3Q8NEB9 887 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 PRCCQ92733 491 aaPredicted RBP5.46□□□□□ -1.54
VPS13C-204ENST00000395898 AARSD1Q9BTE6 412 aaKnown RBP5.46□□□□□ -1.54
VPS13C-204ENST00000395898 CDADC1Q9BWV3 514 aa5.46□□□□□ -1.54
VPS13C-204ENST00000395898 TMPRSS4Q9NRS4 437 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms