RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 GP5P40197 560 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 IER5LQ5T953 404 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 NEPROQ6NW34 567 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 TPRG1Q6ZUI0 275 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 PTAR1Q7Z6K3 402 aaPredicted RBP20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 STRA8Q7Z7C7 330 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 CNTN4Q8IWV2 1026 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 OTUD6BQ8N6M0 293 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 MSANTD3Q96H12 275 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 SUDS3Q9H7L9 328 aaPredicted RBP20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 BPIFA1Q9NP55 256 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 SARDHQ9UL12 918 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 PPM1HQ9ULR3 514 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 ZNF106Q9H2Y7 1883 aaKnown RBP20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 FOXO6A8MYZ6 492 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 CLDN7O95471 211 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 IL1BP01584 269 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 HADHAP40939 763 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 C2orf27AQ580R0 203 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 LRRC73Q5JTD7 316 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 GRTP1Q5TC63 336 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 ERLEC1Q96DZ1 483 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 MCCC1Q96RQ3 725 aaPredicted RBP20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 FAM129BQ96TA1 746 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 IL17CQ9P0M4 197 aa20.44■□□□□ 0.86
VCPKMT-202ENST00000395860 CCDC162PA2VCL2 907 aa20.43■□□□□ 0.86
VCPKMT-202ENST00000395860 OR51F1A6NGY5 319 aa20.43■□□□□ 0.86
VCPKMT-202ENST00000395860 C16orf96A6NNT2 1141 aa20.43■□□□□ 0.86
VCPKMT-202ENST00000395860 UPK3BL1B0FP48 263 aa20.43■□□□□ 0.86
VCPKMT-202ENST00000395860 UPK3BL2E5RIL1 263 aa20.43■□□□□ 0.86
VCPKMT-202ENST00000395860 GOT2P00505 430 aaKnown RBP20.43■□□□□ 0.86
VCPKMT-202ENST00000395860 CYP2A6P11509 494 aaPredicted RBP20.43■□□□□ 0.86
VCPKMT-202ENST00000395860 CNTFP26441 200 aa20.43■□□□□ 0.86
VCPKMT-202ENST00000395860 SEMG2Q02383 582 aa20.43■□□□□ 0.86
VCPKMT-202ENST00000395860 CDKN3Q16667 212 aa20.43■□□□□ 0.86
VCPKMT-202ENST00000395860 SLC44A4Q53GD3 710 aa20.43■□□□□ 0.86
VCPKMT-202ENST00000395860 ZNF470Q6ECI4 717 aa20.43■□□□□ 0.86
VCPKMT-202ENST00000395860 SDE2Q6IQ49 451 aa20.43■□□□□ 0.86
VCPKMT-202ENST00000395860 CRTC1Q6UUV9 634 aa20.43■□□□□ 0.86
VCPKMT-202ENST00000395860 TTC7BQ86TV6 843 aa20.43■□□□□ 0.86
VCPKMT-202ENST00000395860 TSPAN33Q86UF1 283 aa20.43■□□□□ 0.86
VCPKMT-202ENST00000395860 TRABD2AQ86V40 505 aa20.43■□□□□ 0.86
VCPKMT-202ENST00000395860 EXOC3L1Q86VI1 746 aa20.43■□□□□ 0.86
VCPKMT-202ENST00000395860 KCNV2Q8TDN2 545 aa20.43■□□□□ 0.86
VCPKMT-202ENST00000395860 PPP1R16AQ96I34 528 aa20.43■□□□□ 0.86
VCPKMT-202ENST00000395860 C1QTNF3-AMACRE9PGA6 284 aa20.42■□□□□ 0.86
VCPKMT-202ENST00000395860 SYNCRIPO60506 623 aaKnown RBP20.42■□□□□ 0.86
VCPKMT-202ENST00000395860 SNRPAP09012 282 aaKnown RBP20.42■□□□□ 0.86
VCPKMT-202ENST00000395860 TIMP2P16035 220 aa20.42■□□□□ 0.86
VCPKMT-202ENST00000395860 PSMA3P25788 255 aa20.42■□□□□ 0.86
VCPKMT-202ENST00000395860 HPDP32754 393 aaPredicted RBP20.42■□□□□ 0.86
VCPKMT-202ENST00000395860 SLC1A2P43004 574 aa20.42■□□□□ 0.86
VCPKMT-202ENST00000395860 CTBP1Q13363 440 aa20.42■□□□□ 0.86
VCPKMT-202ENST00000395860 MICALCLQ6ZW33 695 aa20.42■□□□□ 0.86
VCPKMT-202ENST00000395860 PARS2Q7L3T8 475 aaKnown RBP20.42■□□□□ 0.86
VCPKMT-202ENST00000395860 MMAAQ8IVH4 418 aaKnown RBP20.42■□□□□ 0.86
VCPKMT-202ENST00000395860 DENND6AQ8IWF6 608 aa20.42■□□□□ 0.86
VCPKMT-202ENST00000395860 LMNTD2Q8IXW0 634 aa20.42■□□□□ 0.86
VCPKMT-202ENST00000395860 SRRM1Q8IYB3 904 aaKnown RBP20.42■□□□□ 0.86
VCPKMT-202ENST00000395860 OR4L1Q8NH43 312 aa20.42■□□□□ 0.86
VCPKMT-202ENST00000395860 FAM3CQ92520 227 aa20.42■□□□□ 0.86
VCPKMT-202ENST00000395860 EID2BQ96D98 161 aa20.42■□□□□ 0.86
VCPKMT-202ENST00000395860 RBBP8Q99708 897 aa20.42■□□□□ 0.86
VCPKMT-202ENST00000395860 B4GALT6Q9UBX8 382 aa20.42■□□□□ 0.86
VCPKMT-202ENST00000395860 FKBPLQ9UIM3 349 aa20.42■□□□□ 0.86
VCPKMT-202ENST00000395860 UNC80Q8N2C7 3258 aa20.42■□□□□ 0.86
VCPKMT-202ENST00000395860 TRIM49D1C9J1S8 452 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 POLR3GO15318 223 aaPredicted RBP20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 F7P08709 466 aaPredicted RBP20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 ITGB7P26010 798 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 NTSR1P30989 418 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 CSE1LP55060 971 aaKnown RBP20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 BMPR2Q13873 1038 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 LRRC66Q68CR7 880 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 AFTPHQ6ULP2 937 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 C2CD4AQ8NCU7 369 aaPredicted RBP20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 MZB1Q8WU39 189 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 MTBPQ96DY7 904 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 PCDH12Q9NPG4 1184 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 DYRK4Q9NR20 520 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 FBXO5Q9UKT4 447 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 DUSP12Q9UNI6 340 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 PRUNE2Q8WUY3 3088 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 A0A1W2PPM1 405 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 NR1D1P20393 614 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 VIPR1P32241 457 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 SPRP35270 261 aaPredicted RBP20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 MPP1Q00013 466 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 CAMK2GQ13555 558 aaPredicted RBP20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 ARHGEF7Q14155 803 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 MROH9Q5TGP6 573 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 ADHFE1Q8IWW8 467 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 FAM76AQ8TAV0 307 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 PBXIP1Q96AQ6 731 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 ARRDC3Q96B67 414 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 CATSPERZQ9NTU4 200 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 SENP1Q9P0U3 644 aa20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 FNDC3AQ9Y2H6 1198 aaKnown RBP20.41■□□□□ 0.86
VCPKMT-202ENST00000395860 H7C0S8 307 aa20.4■□□□□ 0.86
VCPKMT-202ENST00000395860 CD3EAPO15446 510 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms