RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 ZNF829Q3KNS6 432 aaPredicted RBP14.34□□□□□ -0.11
CLIP2-203ENST00000395060 PAN2Q504Q3 1202 aaKnown RBP14.34□□□□□ -0.11
CLIP2-203ENST00000395060 ABRAXAS1Q6UWZ7 409 aa14.34□□□□□ -0.11
CLIP2-203ENST00000395060 PDZD4Q76G19 769 aaPredicted RBP14.34□□□□□ -0.11
CLIP2-203ENST00000395060 TRPC4APQ8TEL6 797 aa14.34□□□□□ -0.11
CLIP2-203ENST00000395060 TMEM30AQ9NV96 361 aa14.34□□□□□ -0.11
CLIP2-203ENST00000395060 DAPK2Q9UIK4 370 aa14.34□□□□□ -0.11
CLIP2-203ENST00000395060 BCL10O95999 233 aa14.33□□□□□ -0.11
CLIP2-203ENST00000395060 NFATC3Q12968 1075 aa14.33□□□□□ -0.11
CLIP2-203ENST00000395060 DNASE1L3Q13609 305 aa14.33□□□□□ -0.11
CLIP2-203ENST00000395060 TRIM16LQ309B1 348 aa14.33□□□□□ -0.11
CLIP2-203ENST00000395060 AFAP1L2Q8N4X5 818 aa14.33□□□□□ -0.11
CLIP2-203ENST00000395060 ANKFN1Q8N957 763 aa14.33□□□□□ -0.11
CLIP2-203ENST00000395060 PPHLN1Q8NEY8 458 aaKnown RBP14.33□□□□□ -0.11
CLIP2-203ENST00000395060 KCNN1Q92952 543 aa14.33□□□□□ -0.11
CLIP2-203ENST00000395060 ACDQ96AP0 544 aa14.33□□□□□ -0.11
CLIP2-203ENST00000395060 SGIP1Q9BQI5 828 aa14.33□□□□□ -0.11
CLIP2-203ENST00000395060 DNAI2Q9GZS0 605 aa14.33□□□□□ -0.11
CLIP2-203ENST00000395060 CPA4Q9UI42 421 aa14.33□□□□□ -0.11
CLIP2-203ENST00000395060 KCTD3Q9Y597 815 aa14.33□□□□□ -0.11
CLIP2-203ENST00000395060 MCM3APO60318 1980 aa14.33□□□□□ -0.12
CLIP2-203ENST00000395060 KANSL1LA0AUZ9 987 aa14.33□□□□□ -0.12
CLIP2-203ENST00000395060 CAPNS1P04632 268 aa14.33□□□□□ -0.12
CLIP2-203ENST00000395060 BMP2P12643 396 aa14.33□□□□□ -0.12
CLIP2-203ENST00000395060 HGFP14210 728 aa14.33□□□□□ -0.12
CLIP2-203ENST00000395060 CCNA2P20248 432 aa14.33□□□□□ -0.12
CLIP2-203ENST00000395060 EDNRBP24530 442 aa14.33□□□□□ -0.12
CLIP2-203ENST00000395060 SH3BP2P78314 561 aa14.33□□□□□ -0.12
CLIP2-203ENST00000395060 CACNB2Q08289 660 aaPredicted RBP14.33□□□□□ -0.12
CLIP2-203ENST00000395060 NFYCQ13952 458 aa14.33□□□□□ -0.12
CLIP2-203ENST00000395060 FRG1Q14331 258 aaKnown RBP14.33□□□□□ -0.12
CLIP2-203ENST00000395060 ITIH5Q86UX2 942 aa14.33□□□□□ -0.12
CLIP2-203ENST00000395060 HS3ST5Q8IZT8 346 aa14.33□□□□□ -0.12
CLIP2-203ENST00000395060 PCYOX1LQ8NBM8 494 aa14.33□□□□□ -0.12
CLIP2-203ENST00000395060 TEX37Q96LM6 180 aa14.33□□□□□ -0.12
CLIP2-203ENST00000395060 NEURL2Q9BR09 285 aa14.33□□□□□ -0.12
CLIP2-203ENST00000395060 CCM2LQ9NUG4 571 aaPredicted RBP14.33□□□□□ -0.12
CLIP2-203ENST00000395060 TSC22D4Q9Y3Q8 395 aa14.33□□□□□ -0.12
CLIP2-203ENST00000395060 SYNCRIPO60506 623 aaKnown RBP14.32□□□□□ -0.12
CLIP2-203ENST00000395060 MYF6P23409 242 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 EEF1DP29692 281 aaKnown RBP14.32□□□□□ -0.12
CLIP2-203ENST00000395060 ADSLP30566 484 aaPredicted RBP14.32□□□□□ -0.12
CLIP2-203ENST00000395060 RAD23AP54725 363 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 GSTM4Q03013 218 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 LAPTM5Q13571 262 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 SLC36A3Q495N2 470 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 PCID2Q5JVF3 399 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 ERO1BQ86YB8 467 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 SLC7A5P1Q8MH63 180 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 CLEC4FQ8N1N0 589 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 TNIP2Q8NFZ5 429 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 PABPC5Q96DU9 382 aaKnown RBP14.32□□□□□ -0.12
CLIP2-203ENST00000395060 GLT1D1Q96MS3 346 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 EML4Q9HC35 981 aaKnown RBP14.32□□□□□ -0.12
CLIP2-203ENST00000395060 SEMA4BQ9NPR2 832 aaPredicted RBP14.32□□□□□ -0.12
CLIP2-203ENST00000395060 AASSQ9UDR5 926 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 NDUFAF1Q9Y375 327 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 MAGEB16A2A368 324 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 ERI2A8K979 691 aaKnown RBP14.32□□□□□ -0.12
CLIP2-203ENST00000395060 SLC22A2O15244 555 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 NPHS1O60500 1241 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 CRCPO75575 148 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 ACADSBP45954 432 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 RPS9P46781 194 aaKnown RBP14.32□□□□□ -0.12
CLIP2-203ENST00000395060 SPIDRQ14159 915 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 POLD3Q15054 466 aaPredicted RBP14.32□□□□□ -0.12
CLIP2-203ENST00000395060 PGS1Q32NB8 556 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 UGT3A2Q3SY77 523 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 TECRLQ5HYJ1 363 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 PRR23BQ6ZRT6 265 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 CLEC20AQ6ZU45 233 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 ZFP42Q96MM3 310 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 HEPHQ9BQS7 1158 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 HERC2P3Q9BVR0 1158 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 MEAF6Q9HAF1 191 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 MRPL40Q9NQ50 206 aaKnown RBP14.32□□□□□ -0.12
CLIP2-203ENST00000395060 AGPAT4Q9NRZ5 378 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 ADARB2Q9NS39 739 aaKnown RBP14.32□□□□□ -0.12
CLIP2-203ENST00000395060 PKD2L2Q9NZM6 624 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 MPP6Q9NZW5 540 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 PIN4Q9Y237 131 aaKnown RBP14.32□□□□□ -0.12
CLIP2-203ENST00000395060 DNAJC15Q9Y5T4 150 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 ZNF487B1APH4 448 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 UBXN8O00124 270 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 NOBOXO60393 691 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 DAB1O75553 588 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 NPR3P17342 541 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 CDKN2DP55273 166 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 CREB5Q02930 508 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 TRAP1Q12931 704 aaKnown RBP14.32□□□□□ -0.12
CLIP2-203ENST00000395060 UGP2Q16851 508 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 RGS21Q2M5E4 152 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 TIGD2Q4W5G0 525 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 STK32CQ86UX6 486 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 RAVER1Q8IY67 606 aaKnown RBP14.32□□□□□ -0.12
CLIP2-203ENST00000395060 PTGR2Q8N8N7 351 aaPredicted RBP14.32□□□□□ -0.12
CLIP2-203ENST00000395060 ZC3H15Q8WU90 426 aaKnown RBP14.32□□□□□ -0.12
CLIP2-203ENST00000395060 ITCHQ96J02 903 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 MCMBPQ9BTE3 642 aa14.32□□□□□ -0.12
CLIP2-203ENST00000395060 BEGAINQ9BUH8 593 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms