RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 NLE1Q9NVX2 485 aaPredicted RBP15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 UBA2Q9UBT2 640 aaPredicted RBP15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 FESP07332 822 aa15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 CD1DP15813 335 aa15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 HMGA1P17096 107 aaKnown RBP15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 STC1P52823 247 aa15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 PTPRCAPQ14761 206 aa15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 TCHHL1Q5QJ38 904 aaPredicted RBP15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 ZNF678Q5SXM1 525 aa15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 SDCCAG8Q86SQ7 713 aaPredicted RBP15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 DHDDSQ86SQ9 333 aa15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 PGAM4Q8N0Y7 254 aa15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 PTERQ96BW5 349 aa15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 CCDC124Q96CT7 223 aaKnown RBP15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 PHF21BQ96EK2 531 aa15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 ZNF512Q96ME7 567 aaPredicted RBP15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 PRICKLE1Q96MT3 831 aaPredicted RBP15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 CWH43Q9H720 699 aa15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 TNFRSF12AQ9NP84 129 aa15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 CATSPERZQ9NTU4 200 aa15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 INTS10Q9NVR2 710 aaKnown RBP15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 POLR3BQ9NW08 1133 aaPredicted RBP15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 HSFX1Q9UBD0 423 aa15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 G3BP2Q9UN86 482 aaKnown RBP15.35■□□□□ 0.05
UBE2D3-207ENST00000394801 TCAF2A6NFQ2 919 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 COCHO43405 550 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 AHCYL1O43865 530 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 CRTAMO95727 393 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 KLKB1P03952 638 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 CES1P23141 567 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 OR1D2P34982 312 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 OXCT1P55809 520 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 RPS24P62847 133 aaKnown RBP15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 DEFB115Q30KQ5 88 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 PIGGQ5H8A4 983 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 CHST9Q7L1S5 443 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 PIM3Q86V86 326 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 RHEBL1Q8TAI7 183 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 RCN3Q96D15 328 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 MYRFLQ96LU7 910 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 CINPQ9BW66 212 aaPredicted RBP15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 AFF4Q9UHB7 1163 aaKnown RBP15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 ACTL7AQ9Y615 435 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 INSIG1O15503 277 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 CXCL10P02778 98 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 ZNF37AP17032 561 aaPredicted RBP15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 RGRP47804 291 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 ZNF140P52738 457 aaPredicted RBP15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 PLK1P53350 603 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 DENND1CQ8IV53 801 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 EFCAB3Q8N7B9 438 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 AARSD1Q9BTE6 412 aaKnown RBP15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 YIPF3Q9GZM5 350 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 NACA2Q9H009 215 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 TBC1D30Q9Y2I9 924 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 TRAF6Q9Y4K3 522 aa15.34■□□□□ 0.05
UBE2D3-207ENST00000394801 UBFD1O14562 309 aaKnown RBP15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 STC2O76061 302 aa15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 PRLP01236 227 aa15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 ALDH7A1P49419 539 aaKnown RBP15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 HERVK_113P63132 956 aa15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 DSG1Q02413 1049 aa15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 ZNF423Q2M1K9 1284 aa15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 UNC50Q53HI1 259 aa15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 CDRT15Q96T59 188 aa15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 ECSITQ9BQ95 431 aa15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 SPON2Q9BUD6 331 aa15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 VN1R3Q9BXE9 311 aa15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 ERVK-6Q9BXR3 956 aa15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 UTP6Q9NYH9 597 aaKnown RBP15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 MTF2Q9Y483 593 aaPredicted RBP15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 DPPA5A6NC42 116 aa15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 ABLIM3O94929 683 aa15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 F11P03951 625 aa15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 PIRTP0C851 137 aa15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 RPL17P18621 184 aaKnown RBP15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 CYTH1Q15438 398 aa15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 TAF1AQ15573 450 aaPredicted RBP15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 ADGRF1Q5T601 910 aa15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 BNC2Q6ZN30 1099 aaPredicted RBP15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 ASB2Q96Q27 587 aa15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 TCF12Q99081 682 aa15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 TFB2MQ9H5Q4 396 aaKnown RBP15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 ZDHHC7Q9NXF8 308 aa15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 SPO11Q9Y5K1 396 aa15.33■□□□□ 0.04
UBE2D3-207ENST00000394801 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 A0A1B0GVM2 712 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 EME2A4GXA9 379 aaPredicted RBP15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 ENO4A6NNW6 628 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 H3BNX3 289 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 SMIM24O75264 130 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 SEC24AO95486 1093 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 PDHA1P08559 390 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 SCNN1BP51168 640 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 CDC16Q13042 620 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 ZNF177Q13360 481 aaPredicted RBP15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 GSTA3Q16772 222 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 IZUMO2Q6UXV1 221 aa15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 RPS27LQ71UM5 84 aaKnown RBP15.32■□□□□ 0.04
UBE2D3-207ENST00000394801 SPDYE1Q8NFV5 336 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms