RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 SLC38A7Q9NVC3 462 aa18.39■□□□□ 0.53
PCDHA1-202ENST00000394633 MTF2Q9Y483 593 aaPredicted RBP18.39■□□□□ 0.53
PCDHA1-202ENST00000394633 NLRC5Q86WI3 1866 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 FGF10O15520 208 aaPredicted RBP18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 CHRNA1P02708 482 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 IMPDH1P20839 514 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 ATP4BP51164 291 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 MRPS6P82932 125 aaKnown RBP18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 PRKCQQ04759 706 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 NHSL2Q5HYW2 709 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 IRAK1BP1Q5VVH5 260 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 KRT80Q6KB66 452 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 ZBTB49Q6ZSB9 765 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 RETREG3Q86VR2 466 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 FIBCD1Q8N539 461 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 CANT1Q8WVQ1 401 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 PPWD1Q96BP3 646 aaKnown RBP18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 TSPAN17Q96FV3 270 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 PAAF1Q9BRP4 392 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 ANKRD60Q9BZ19 345 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 TBC1D13Q9NVG8 400 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 GALNT8Q9NY28 637 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 HACD3Q9P035 362 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 WISP3O95389 354 aaPredicted RBP18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 GPX3P22352 226 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 CDK9P50750 372 aaKnown RBP18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 NDST2P52849 883 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 ZNF678Q5SXM1 525 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 AFMIDQ63HM1 303 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 TIGD7Q6NT04 549 aaPredicted RBP18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 PPP4R4Q6NUP7 873 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 OR2T34Q8NGX1 318 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 OR2T3Q8NH03 318 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 SCAMP5Q8TAC9 235 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 CALML6Q8TD86 181 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 RMND5BQ96G75 393 aaPredicted RBP18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 LRCH3Q96II8 777 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 FCRL2Q96LA5 508 aaPredicted RBP18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 ALG9Q9H6U8 611 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 TMLHEQ9NVH6 421 aa18.38■□□□□ 0.53
PCDHA1-202ENST00000394633 MSI1O43347 362 aaKnown RBP18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 SUPT7LO94864 414 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 THP07101 528 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 PCSK1P29120 753 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 GRIA3P42263 894 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 ACADVLP49748 655 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 EMP3P54852 163 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 CDKN2DP55273 166 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 TIGD5Q53EQ6 642 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 UNC50Q53HI1 259 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 BRMS1LQ5PSV4 323 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 ERMP1Q7Z2K6 904 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 LDB1Q86U70 411 aaPredicted RBP18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 OR13J1Q8NGT2 312 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 SH3RF2Q8TEC5 729 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 LPPQ93052 612 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 L3HYPDHQ96EM0 354 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 ARMC1Q9NVT9 282 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 SFMBT1Q9UHJ3 866 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 VWA7Q9Y334 891 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 MYO16Q9Y6X6 1858 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 CASTOR2A6NHX0 329 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 BMP2P12643 396 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 PGFP49763 221 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 CDH15P55291 814 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 UGT3A2Q3SY77 523 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 GPR158Q5T848 1215 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 LPCAT2Q7L5N7 544 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 CILP2Q8IUL8 1156 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 ERI1Q8IV48 349 aaKnown RBP18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 SCML4Q8N228 414 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 ROPN1LQ96C74 230 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 C19orf60Q96EN9 201 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 TRMOQ9BU70 441 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 LIN28AQ9H9Z2 209 aaKnown RBP18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 ARNT2Q9HBZ2 717 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 ATP13A1Q9HD20 1204 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 MPP6Q9NZW5 540 aa18.37■□□□□ 0.53
PCDHA1-202ENST00000394633 NME4O00746 187 aa18.36■□□□□ 0.53
PCDHA1-202ENST00000394633 AKAP10O43572 662 aa18.36■□□□□ 0.53
PCDHA1-202ENST00000394633 HSPA8P11142 646 aaKnown RBP18.36■□□□□ 0.53
PCDHA1-202ENST00000394633 FAM171BQ6P995 826 aa18.36■□□□□ 0.53
PCDHA1-202ENST00000394633 C14orf80Q86SX3 495 aa18.36■□□□□ 0.53
PCDHA1-202ENST00000394633 ISCA2Q86U28 154 aa18.36■□□□□ 0.53
PCDHA1-202ENST00000394633 TFAP2CQ92754 450 aa18.36■□□□□ 0.53
PCDHA1-202ENST00000394633 PHF12Q96QT6 1004 aa18.36■□□□□ 0.53
PCDHA1-202ENST00000394633 TCF12Q99081 682 aa18.36■□□□□ 0.53
PCDHA1-202ENST00000394633 GPATCH1Q9BRR8 931 aaKnown RBP18.36■□□□□ 0.53
PCDHA1-202ENST00000394633 AKTIPQ9H8T0 292 aa18.36■□□□□ 0.53
PCDHA1-202ENST00000394633 MAP10Q9P2G4 905 aa18.36■□□□□ 0.53
PCDHA1-202ENST00000394633 SQORQ9Y6N5 450 aa18.36■□□□□ 0.53
PCDHA1-202ENST00000394633 TTC3P53804 2025 aa18.36■□□□□ 0.53
PCDHA1-202ENST00000394633 CCL22O00626 93 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 RPL10P27635 214 aaKnown RBP18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 HTR7P34969 479 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 THPOP40225 353 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 SERPINH1P50454 418 aaKnown RBP18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 STX1BP61266 288 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 TUBA4AP68366 448 aa18.35■□□□□ 0.53
PCDHA1-202ENST00000394633 MAP7D1Q3KQU3 841 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms