RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 SPOCK2Q92563 424 aa15.39■□□□□ 0.05
CHMP3-202ENST00000393773 NUS1Q96E22 293 aa15.39■□□□□ 0.05
CHMP3-202ENST00000393773 CNPY3Q9BT09 278 aa15.39■□□□□ 0.05
CHMP3-202ENST00000393773 FRMD8Q9BZ67 464 aaPredicted RBP15.39■□□□□ 0.05
CHMP3-202ENST00000393773 SLC39A8Q9C0K1 460 aa15.39■□□□□ 0.05
CHMP3-202ENST00000393773 EPN3Q9H201 632 aa15.39■□□□□ 0.05
CHMP3-202ENST00000393773 CLSTN2Q9H4D0 955 aa15.39■□□□□ 0.05
CHMP3-202ENST00000393773 CARS2Q9HA77 564 aaKnown RBP15.39■□□□□ 0.05
CHMP3-202ENST00000393773 NLRC4Q9NPP4 1024 aa15.39■□□□□ 0.05
CHMP3-202ENST00000393773 FAM207AQ9NSI2 230 aaPredicted RBP15.39■□□□□ 0.05
CHMP3-202ENST00000393773 GPATCH2LQ9NWQ4 482 aa15.39■□□□□ 0.05
CHMP3-202ENST00000393773 TAAR2Q9P1P5 351 aa15.39■□□□□ 0.05
CHMP3-202ENST00000393773 B4GALT6Q9UBX8 382 aa15.39■□□□□ 0.05
CHMP3-202ENST00000393773 SPTAN1Q13813 2472 aaKnown RBP15.39■□□□□ 0.05
CHMP3-202ENST00000393773 FUCA1P04066 466 aa15.38■□□□□ 0.05
CHMP3-202ENST00000393773 CEACAM5P06731 702 aa15.38■□□□□ 0.05
CHMP3-202ENST00000393773 THRAP10827 490 aa15.38■□□□□ 0.05
CHMP3-202ENST00000393773 LIFP15018 202 aa15.38■□□□□ 0.05
CHMP3-202ENST00000393773 CD1CP29017 333 aa15.38■□□□□ 0.05
CHMP3-202ENST00000393773 ATP1A2P50993 1020 aa15.38■□□□□ 0.05
CHMP3-202ENST00000393773 LIMK2P53671 638 aa15.38■□□□□ 0.05
CHMP3-202ENST00000393773 POLE2P56282 527 aa15.38■□□□□ 0.05
CHMP3-202ENST00000393773 OGDHQ02218 1023 aa15.38■□□□□ 0.05
CHMP3-202ENST00000393773 BORAQ6PGQ7 559 aa15.38■□□□□ 0.05
CHMP3-202ENST00000393773 ARHGAP36Q6ZRI8 547 aa15.38■□□□□ 0.05
CHMP3-202ENST00000393773 HEATR4Q86WZ0 1026 aa15.38■□□□□ 0.05
CHMP3-202ENST00000393773 PATE1Q8WXA2 126 aa15.38■□□□□ 0.05
CHMP3-202ENST00000393773 TAAR9Q96RI9 348 aa15.38■□□□□ 0.05
CHMP3-202ENST00000393773 CINPQ9BW66 212 aaPredicted RBP15.38■□□□□ 0.05
CHMP3-202ENST00000393773 GSDMCQ9BYG8 508 aa15.38■□□□□ 0.05
CHMP3-202ENST00000393773 VPS16Q9H269 839 aa15.38■□□□□ 0.05
CHMP3-202ENST00000393773 AKAP7Q9P0M2 348 aaPredicted RBP15.38■□□□□ 0.05
CHMP3-202ENST00000393773 MOSPD1Q9UJG1 213 aa15.38■□□□□ 0.05
CHMP3-202ENST00000393773 AP4E1Q9UPM8 1137 aa15.38■□□□□ 0.05
CHMP3-202ENST00000393773 SIK3Q9Y2K2 1263 aa15.38■□□□□ 0.05
CHMP3-202ENST00000393773 ARHGAP42A6NI28 874 aa15.37■□□□□ 0.05
CHMP3-202ENST00000393773 RHPN2P1A8MT19 583 aa15.37■□□□□ 0.05
CHMP3-202ENST00000393773 TEX33O43247 280 aa15.37■□□□□ 0.05
CHMP3-202ENST00000393773 PALMO75781 387 aa15.37■□□□□ 0.05
CHMP3-202ENST00000393773 ECEL1O95672 775 aa15.37■□□□□ 0.05
CHMP3-202ENST00000393773 AK4P27144 223 aaPredicted RBP15.37■□□□□ 0.05
CHMP3-202ENST00000393773 ALDH4A1P30038 563 aa15.37■□□□□ 0.05
CHMP3-202ENST00000393773 UGT1A3P35503 534 aa15.37■□□□□ 0.05
CHMP3-202ENST00000393773 AP1S1P61966 158 aa15.37■□□□□ 0.05
CHMP3-202ENST00000393773 BCL2L1Q07817 233 aa15.37■□□□□ 0.05
CHMP3-202ENST00000393773 ILF3Q12906 894 aaKnown RBP eCLIP15.37■□□□□ 0.055e-7■■■■□ 23.6
CHMP3-202ENST00000393773 KCNAB2Q13303 367 aa15.37■□□□□ 0.05
CHMP3-202ENST00000393773 TRA2AQ13595 282 aaKnown RBP eCLIP15.37■□□□□ 0.05
CHMP3-202ENST00000393773 ACOX1Q15067 660 aa15.37■□□□□ 0.05
CHMP3-202ENST00000393773 CNGA3Q16281 694 aa15.37■□□□□ 0.05
CHMP3-202ENST00000393773 CA9Q16790 459 aa15.37■□□□□ 0.05
CHMP3-202ENST00000393773 CDKAL1Q5VV42 579 aa15.37■□□□□ 0.05
CHMP3-202ENST00000393773 NAGSQ8N159 534 aa15.37■□□□□ 0.05
CHMP3-202ENST00000393773 DDA1Q9BW61 102 aa15.37■□□□□ 0.05
CHMP3-202ENST00000393773 TEX101Q9BY14 249 aa15.37■□□□□ 0.05
CHMP3-202ENST00000393773 CDH19Q9H159 772 aa15.37■□□□□ 0.05
CHMP3-202ENST00000393773 SUDS3Q9H7L9 328 aaPredicted RBP15.37■□□□□ 0.05
CHMP3-202ENST00000393773 TRNAU1APQ9NX07 287 aaKnown RBP15.37■□□□□ 0.05
CHMP3-202ENST00000393773 DACH1Q9UI36 760 aa15.37■□□□□ 0.05
CHMP3-202ENST00000393773 TUBD1Q9UJT1 453 aa15.37■□□□□ 0.05
CHMP3-202ENST00000393773 B3GALT1Q9Y5Z6 326 aa15.37■□□□□ 0.05
CHMP3-202ENST00000393773 IGHV1OR21-1A0A087WYE8 117 aa15.36■□□□□ 0.05
CHMP3-202ENST00000393773 CLEC18AA5D8T8 446 aa15.36■□□□□ 0.05
CHMP3-202ENST00000393773 A8MX80 341 aa15.36■□□□□ 0.05
CHMP3-202ENST00000393773 PDE2AO00408 941 aaPredicted RBP15.36■□□□□ 0.05
CHMP3-202ENST00000393773 LHCGRP22888 699 aa15.36■□□□□ 0.05
CHMP3-202ENST00000393773 GPR3P46089 330 aa15.36■□□□□ 0.05
CHMP3-202ENST00000393773 GNPDA1P46926 289 aa15.36■□□□□ 0.05
CHMP3-202ENST00000393773 CDK3Q00526 305 aa15.36■□□□□ 0.05
CHMP3-202ENST00000393773 KRT31Q15323 416 aa15.36■□□□□ 0.05
CHMP3-202ENST00000393773 SLC30A9Q6PML9 568 aa15.36■□□□□ 0.05
CHMP3-202ENST00000393773 CLEC18BQ6UXF7 455 aa15.36■□□□□ 0.05
CHMP3-202ENST00000393773 PTRH1Q86Y79 214 aaKnown RBP15.36■□□□□ 0.05
CHMP3-202ENST00000393773 CLEC18CQ8NCF0 446 aa15.36■□□□□ 0.05
CHMP3-202ENST00000393773 OR4D9Q8NGE8 314 aa15.36■□□□□ 0.05
CHMP3-202ENST00000393773 ART4Q93070 314 aa15.36■□□□□ 0.05
CHMP3-202ENST00000393773 DTD2Q96FN9 168 aa15.36■□□□□ 0.05
CHMP3-202ENST00000393773 PSKH2Q96QS6 385 aa15.36■□□□□ 0.05
CHMP3-202ENST00000393773 PEBP4Q96S96 227 aa15.36■□□□□ 0.05
CHMP3-202ENST00000393773 SP110Q9HB58 689 aa15.36■□□□□ 0.05
CHMP3-202ENST00000393773 PHPT1Q9NRX4 125 aaPredicted RBP15.36■□□□□ 0.05
CHMP3-202ENST00000393773 DONSONQ9NYP3 566 aa15.36■□□□□ 0.05
CHMP3-202ENST00000393773 TMEM9Q9P0T7 183 aa15.36■□□□□ 0.05
CHMP3-202ENST00000393773 ANKMY1Q9P2S6 941 aa15.36■□□□□ 0.05
CHMP3-202ENST00000393773 SUFUQ9UMX1 484 aa15.36■□□□□ 0.05
CHMP3-202ENST00000393773 ANKRD62A6NC57 917 aa15.35■□□□□ 0.05
CHMP3-202ENST00000393773 EEF2KO00418 725 aaKnown RBP15.35■□□□□ 0.05
CHMP3-202ENST00000393773 HTRA2O43464 458 aaPredicted RBP15.35■□□□□ 0.05
CHMP3-202ENST00000393773 HEXIM1O94992 359 aaKnown RBP15.35■□□□□ 0.05
CHMP3-202ENST00000393773 POLR2LP62875 67 aaKnown RBP15.35■□□□□ 0.05
CHMP3-202ENST00000393773 CTBSQ01459 385 aa15.35■□□□□ 0.05
CHMP3-202ENST00000393773 IL10RBQ08334 325 aa15.35■□□□□ 0.05
CHMP3-202ENST00000393773 NSUN2Q08J23 767 aaKnown RBP eCLIP15.35■□□□□ 0.05
CHMP3-202ENST00000393773 SQSTM1Q13501 440 aa15.35■□□□□ 0.05
CHMP3-202ENST00000393773 RFTN1Q14699 578 aaPredicted RBP15.35■□□□□ 0.05
CHMP3-202ENST00000393773 SKIDA1Q1XH10 827 aa15.35■□□□□ 0.05
CHMP3-202ENST00000393773 NKAIN2Q5VXU1 208 aa15.35■□□□□ 0.05
CHMP3-202ENST00000393773 RFX8Q6ZV50 586 aa15.35■□□□□ 0.05
CHMP3-202ENST00000393773 CYP4V2Q6ZWL3 525 aaPredicted RBP15.35■□□□□ 0.05
CHMP3-202ENST00000393773 IL22RA1Q8N6P7 574 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms