RNA–Protein interactions for RNA: ENST00000393540.7

CCDC110-202, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC110, Length 2,722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-202ENST00000393540 SKIV2L2P42285 1042 aaKnown RBP3.78□□□□□ -1.8
CCDC110-202ENST00000393540 GLRBP48167 497 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 CD151P48509 253 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 POLD2P49005 469 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 SCNN1BP51168 640 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 ARFIP2P53365 341 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 NTHL1P78549 312 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 PFKPQ01813 784 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 POU4F1Q01851 419 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 LMAN2Q12907 356 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 USP4Q13107 963 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 SLC12A1Q13621 1099 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 ZNF235Q14590 738 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 TECRLQ5HYJ1 363 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 PRSS36Q5K4E3 855 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 HECTD2Q5U5R9 776 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 LRRC8EQ6NSJ5 796 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 CYB5D1Q6P9G0 228 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 EPGNQ6UW88 154 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 CYHR1Q6ZMK1 362 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 KIAA0408Q6ZU52 694 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 RPS27LQ71UM5 84 aaKnown RBP3.78□□□□□ -1.8
CCDC110-202ENST00000393540 TBC1D1Q86TI0 1168 aaPredicted RBP3.78□□□□□ -1.8
CCDC110-202ENST00000393540 ZNF354CQ86Y25 554 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 CPXM2Q8N436 756 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 ZNF781Q8N8C0 355 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 BLOC1S5Q8TDH9 187 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 PIH1D2Q8WWB5 315 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 USP13Q92995 863 aaPredicted RBP3.78□□□□□ -1.8
CCDC110-202ENST00000393540 BHMTQ93088 406 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 PTERQ96BW5 349 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 ZNF707Q96C28 371 aaPredicted RBP3.78□□□□□ -1.8
CCDC110-202ENST00000393540 CDKN2AIPNLQ96HQ2 116 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 ELMO2Q96JJ3 720 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 LRRC37BQ96QE4 947 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 TCF25Q9BQ70 676 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 PLCD4Q9BRC7 762 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 FAM167BQ9BTA0 163 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 CINPQ9BW66 212 aaPredicted RBP3.78□□□□□ -1.8
CCDC110-202ENST00000393540 OSBPL1AQ9BXW6 950 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 NACA2Q9H009 215 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 KCNH6Q9H252 994 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 LINC00597Q9H2U6 94 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 ZNF385DQ9H6B1 395 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 CERS4Q9HA82 394 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 NSMCE4AQ9NXX6 385 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 PLK2Q9NYY3 685 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.78□□□□□ -1.8
CCDC110-202ENST00000393540 ASB3Q9Y575 518 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 RAI2Q9Y5P3 530 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 SLC4A7Q9Y6M7 1214 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 FAM186AA6NE01 2351 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 NCOR2Q9Y618 2525 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 A0A1W2PPC1 479 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 SOBPA7XYQ1 873 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 C5orf67F2Z3F1 127 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 UBFD1O14562 309 aaKnown RBP3.78□□□□□ -1.8
CCDC110-202ENST00000393540 TRIM24O15164 1050 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 CD3EAPO15446 510 aaKnown RBP3.78□□□□□ -1.8
CCDC110-202ENST00000393540 OR1I1O60431 355 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 DCTN3O75935 186 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 CSPG5O95196 566 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 PIGNO95427 931 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 TSPAN12O95859 305 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 SERPINF2P08697 491 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 COL6A2P12110 1019 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 MTHFD2P13995 350 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 EPCAMP16422 314 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 MPSTP25325 297 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 CRABP2P29373 138 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 CDC25CP30307 473 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 HLA-FP30511 346 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 ELF1P32519 619 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 ABL2P42684 1182 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 PLK1P53350 603 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 FPGSQ05932 587 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 UBAP2LQ14157 1087 aaKnown RBP3.78□□□□□ -1.8
CCDC110-202ENST00000393540 KRT72Q14CN4 511 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 VEPH1Q14D04 833 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 TEAD2Q15562 447 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 TAF1AQ15573 450 aaPredicted RBP3.78□□□□□ -1.8
CCDC110-202ENST00000393540 SEPT7Q16181 437 aaKnown RBP3.78□□□□□ -1.8
CCDC110-202ENST00000393540 FUT11Q495W5 492 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 SLC9B1Q4ZJI4 515 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 INO80DQ53TQ3 878 aaPredicted RBP3.78□□□□□ -1.8
CCDC110-202ENST00000393540 CTSL3PQ5NE16 218 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 PLPP4Q5VZY2 271 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 ATG16L1Q676U5 607 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 TMEM215Q68D42 235 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 PSAPL1Q6NUJ1 521 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 ISCA2Q86U28 154 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 ITIH5Q86UX2 942 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 TMEM25Q86YD3 366 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 WDR75Q8IWA0 830 aaKnown RBP3.78□□□□□ -1.8
CCDC110-202ENST00000393540 TRIM42Q8IWZ5 723 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 GPATCH11Q8N954 259 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 HJURPQ8NCD3 748 aaPredicted RBP3.78□□□□□ -1.8
CCDC110-202ENST00000393540 OR4K2Q8NGD2 314 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 OR6K2Q8NGY2 324 aa3.78□□□□□ -1.8
CCDC110-202ENST00000393540 GIMAP7Q8NHV1 300 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms