RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 LGR4Q9BXB1 951 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 C1QTNF7Q9BXJ2 289 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 SUDS3Q9H7L9 328 aaPredicted RBP7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 GLOD4Q9HC38 313 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 LZTFL1Q9NQ48 299 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 MRPL40Q9NQ50 206 aaKnown RBP7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 GOLGA6AQ9NYA3 693 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 KLHL8Q9P2G9 620 aaPredicted RBP7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 FTSJ1Q9UET6 329 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 KLK13Q9UKR3 277 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 R3HDM2Q9Y2K5 976 aaKnown RBP7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 FRYQ5TBA9 3013 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 TMEM202A6NGA9 273 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 CAPN8A6NHC0 703 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 APOC4-APOC2K7ER74 178 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 YKT6O15498 198 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 SIGLEC6O43699 453 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 DFNA5O60443 496 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 GCATO75600 419 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 LDOC1O95751 146 aaPredicted RBP7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 APOC2P02655 101 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 CSF2P04141 144 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 GIMD1P0DJR0 217 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 CYP2A6P11509 494 aaPredicted RBP7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 NME1P15531 152 aaKnown RBP7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 EIF3EP60228 445 aaKnown RBP7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 PTSQ03393 145 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 OLIG2Q13516 323 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 ARHGEF7Q14155 803 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 NFATC4Q14934 902 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 KCTD19Q17RG1 926 aaPredicted RBP7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 ALG11Q2TAA5 492 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 DEFB133Q30KQ1 61 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 TEX44Q53QW1 395 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 PRRT3Q5FWE3 981 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 ENPP7Q6UWV6 458 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 MACC1Q6ZN28 852 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 TRIM74Q86UV6 250 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 HID1Q8IV36 788 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 PHACTR4Q8IZ21 702 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 SYCE1Q8N0S2 351 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 CCDC112Q8NEF3 446 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 LMX1AQ8TE12 382 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 HTR3CQ8WXA8 447 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 SCAMP4Q969E2 229 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 DTD2Q96FN9 168 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 SCRN2Q96FV2 425 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 OXNAD1Q96HP4 312 aaPredicted RBP7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 CALR3Q96L12 384 aaKnown RBP7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 TEKT5Q96M29 485 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 TRIB3Q96RU7 358 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 GORASP1Q9BQQ3 440 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 LRRC61Q9BV99 259 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 CLPBQ9H078 707 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 SLC25A51Q9H1U9 297 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 FGF22Q9HCT0 170 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 APOBEC3BQ9UH17 382 aaKnown RBP7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 AMACRQ9UHK6 382 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 WASF3Q9UPY6 502 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 SHOC2Q9UQ13 582 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 SPO11Q9Y5K1 396 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 TP53BP1Q12888 1972 aaPredicted RBP7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 SHROOM3Q8TF72 1996 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 DOCK9Q9BZ29 2069 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 PI4KAP42356 2102 aa7.67□□□□□ -1.18
HMGB3P1-201ENST00000393368 ASCC3Q8N3C0 2202 aaKnown RBP7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 CACNA1EQ15878 2313 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 C1orf232A0A0U1RR37 186 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 A0A1W2PQ67 120 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 CFAP69A5D8W1 941 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 FAM149AA5PLN7 773 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 ENC1O14682 589 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 AURKAO14965 403 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 CASC3O15234 703 aaKnown RBP7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 KCNN4O15554 427 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 TNFSF14O43557 240 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 KRT86O43790 486 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 SOD1P00441 154 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 PTMAP06454 111 aaKnown RBP7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 CCDC175P0C221 793 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 RBP3P10745 1247 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 TSHRP16473 764 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 CA4P22748 312 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 CES1P23141 567 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 PTPN7P35236 360 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 CHRNA4P43681 627 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 POLD2P49005 469 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 ACADVLP49748 655 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 STC1P52823 247 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 COPS2P61201 443 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 HNRNPKP61978 463 aaKnown RBP eCLIP7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 YPEL5P62699 121 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 FOXK2Q01167 660 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 MTM1Q13496 603 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 PTK2BQ14289 1009 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 AGERQ15109 404 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 CDKN3Q16667 212 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 INAVAQ3KP66 663 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 FAXCQ5TGI0 409 aa7.66□□□□□ -1.18
HMGB3P1-201ENST00000393368 ALS2CLQ60I27 953 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms