RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 TUBB2BQ9BVA1 445 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 CRNKL1Q9BZJ0 848 aaKnown RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 SMOC2Q9H3U7 446 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 DDX28Q9NUL7 540 aaKnown RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 DTLQ9NZJ0 730 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 NKX1-2Q9UD57 310 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 TRAF3IP3Q9Y228 551 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 CAPN6Q9Y6Q1 641 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 A0A1W2PQ45 241 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 A0A1W2PQY0 241 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 O00370 1275 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 TRIM24O15164 1050 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 SLC22A2O15244 555 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 NUDT21O43809 227 aaKnown RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 ACSL3O95573 720 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 STAG3L3P0CL85 134 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 GAAP10253 952 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 G6PDP11413 515 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 ADRA1BP35368 520 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 TXNL4AP83876 142 aaKnown RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 PDE1BQ01064 536 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 TEKQ02763 1124 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 PTP4A2Q12974 167 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 MTM1Q13496 603 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 TRIM67Q6ZTA4 783 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 SLC43A2Q8N370 569 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 SUPT20HQ8NEM7 779 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 OR7G3Q8NG95 312 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 DUSP19Q8WTR2 217 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 ATOH1Q92858 354 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 PABPC5Q96DU9 382 aaKnown RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 RPRD1AQ96P16 312 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 CADM1Q9BY67 442 aaKnown RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 RTN4RQ9BZR6 473 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 C19orf44Q9H6X5 657 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 ACTR8Q9H981 624 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 MBNL1Q9NR56 388 aaKnown RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 FBXO34Q9NWN3 711 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 POLLQ9UGP5 575 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 SLC5A6Q9Y289 635 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 ADAM18Q9Y3Q7 739 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 KIF7Q2M1P5 1343 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 ZMYM3Q14202 1370 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 A0A0G2JNJ9 132 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 IQANK1A0A1B0GTG1 560 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 FAM170BA6NMN3 283 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 TEX22C9J3V5 150 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 NDUFS8O00217 210 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 SOCS6O14544 535 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 PAPSS1O43252 624 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 DFNA5O60443 496 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 DEAF1O75398 565 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 RECQL5O94762 991 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 OR6B1O95007 311 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 MBP02144 154 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 CYP1A1P04798 512 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 C1SP09871 688 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 ZNF8P17098 575 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 EDN2P20800 178 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 DRD4P21917 467 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 HNF1BP35680 557 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 KCNK10P57789 538 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 FAM3BP58499 235 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 CSNK2BP67870 215 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 RBPJQ06330 500 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 SNTB2Q13425 540 aaKnown RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 USP41Q3LFD5 358 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 ARHGAP17Q68EM7 881 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 SEPT14Q6ZU15 432 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 TRAPPC11Q7Z392 1133 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 LONP2Q86WA8 852 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 ENDOVQ8N8Q3 282 aaKnown RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 SMYD1Q8NB12 490 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 SCAMP4Q969E2 229 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 HHIPL1Q96JK4 782 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 PRICKLE1Q96MT3 831 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 HAPLN3Q96S86 360 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 DMRTA2Q96SC8 542 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 DUSP15Q9H1R2 295 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 AGPAT5Q9NUQ2 364 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 RAB20Q9NX57 234 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 TNFRSF10DQ9UBN6 386 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 Q9UFV3 132 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 MBD1Q9UIS9 605 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 SNX14Q9Y5W7 946 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 X6R8D5 127 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 EIF4G3O43432 1585 aaKnown RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 BAZ1BQ9UIG0 1483 aaKnown RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 GSAPA4D1B5 854 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 OOEPA6NGQ2 149 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 AP4M1O00189 453 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 PPP1R11O60927 126 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 LUC7L3O95232 432 aaKnown RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 CREB1P16220 341 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 EIF2S2P20042 333 aaKnown RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 MAGEA8P43361 318 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 ATP5IP56385 69 aaPredicted RBP3.57□□□□□ -1.84
XRN1-202ENST00000392981 ACTR3P61158 418 aa3.57□□□□□ -1.84
XRN1-202ENST00000392981 MVPQ14764 893 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms