RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 C19orf60Q96EN9 201 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 GPR21Q99679 349 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 ITM2BQ9Y287 266 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 NALCNQ8IZF0 1738 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 SPATA31D3P0C874 917 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 COL6A2P12110 1019 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 PKMP14618 531 aaKnown RBP17.16■□□□□ 0.34
SGCB-201ENST00000381431 C1DQ13901 141 aaKnown RBP17.16■□□□□ 0.34
SGCB-201ENST00000381431 DPYSL2Q16555 572 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 INTS6LQ5JSJ4 861 aaKnown RBP17.16■□□□□ 0.34
SGCB-201ENST00000381431 ARHGAP17Q68EM7 881 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 SPATA31D4Q6ZUB0 917 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 GPR180Q86V85 440 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 ZNF513Q8N8E2 541 aaPredicted RBP17.16■□□□□ 0.34
SGCB-201ENST00000381431 ZCCHC2Q9C0B9 1178 aaKnown RBP17.16■□□□□ 0.34
SGCB-201ENST00000381431 ATP13A3Q9H7F0 1226 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 GNPTGQ9UJJ9 305 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 C3orf18Q9UK00 162 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 SNX6Q9UNH7 406 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 PRMT5O14744 637 aaPredicted RBP17.16■□□□□ 0.34
SGCB-201ENST00000381431 KRT75O95678 551 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 CENPAP49450 140 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 ABRQ12979 859 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 C6orf52Q5T4I8 152 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 NLGN2Q8NFZ4 835 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 TADA1Q96BN2 335 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 OR52E6Q96RD3 313 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 COPS8Q99627 209 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 OSBPL11Q9BXB4 747 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 TBX10O75333 385 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 PITRM1Q5JRX3 1037 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 HEXDCQ8WVB3 486 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 DCAKDQ8WVC6 231 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 DDX1Q92499 740 aaKnown RBP17.16■□□□□ 0.34
SGCB-201ENST00000381431 CORO1BQ9BR76 489 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 TCAF1Q9Y4C2 921 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 POLR3HQ9Y535 204 aaPredicted RBP17.16■□□□□ 0.34
SGCB-201ENST00000381431 XRN1Q8IZH2 1706 aaKnown RBP17.16■□□□□ 0.34
SGCB-201ENST00000381431 NPEPPSL1A6NEC2 478 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 SNTNA6NMZ2 147 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 C1RP00736 705 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 ZNF280AP59817 542 aaPredicted RBP17.16■□□□□ 0.34
SGCB-201ENST00000381431 SVOPQ8N4V2 548 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 DNAJC1Q96KC8 554 aaKnown RBP17.16■□□□□ 0.34
SGCB-201ENST00000381431 SLC7A8Q9UHI5 535 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 POMPQ9Y244 141 aa17.16■□□□□ 0.34
SGCB-201ENST00000381431 ALDH1A2O94788 518 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 AMHP03971 560 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 PANX1Q96RD7 426 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 PNPLA3Q9NST1 481 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 FZD10Q9ULW2 581 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 LMO7Q8WWI1 1683 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 NFKBIEO00221 500 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 AHCYL1O43865 530 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 ZBTB11O95625 1053 aaPredicted RBP17.15■□□□□ 0.34
SGCB-201ENST00000381431 ZNF37AP17032 561 aaPredicted RBP17.15■□□□□ 0.34
SGCB-201ENST00000381431 CCNCP24863 283 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 KRT20P35900 424 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 BNIP2Q12982 314 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 OLIG2Q13516 323 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 ITGA7Q13683 1181 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 BLMHQ13867 455 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 ARMC4Q5T2S8 1044 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 ZCCHC8Q6NZY4 707 aaKnown RBP17.15■□□□□ 0.34
SGCB-201ENST00000381431 PSMG2Q969U7 264 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 MRPL17Q9NRX2 175 aaKnown RBP17.15■□□□□ 0.34
SGCB-201ENST00000381431 SLIT2O94813 1529 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 C9IYK1 514 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 PRR23D1E9PI22 279 aaPredicted RBP17.15■□□□□ 0.34
SGCB-201ENST00000381431 TOP3BO95985 862 aaKnown RBP17.15■□□□□ 0.34
SGCB-201ENST00000381431 PRR23D2P0DMB1 279 aaPredicted RBP17.15■□□□□ 0.34
SGCB-201ENST00000381431 ALOX12P18054 663 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 POLR2EP19388 210 aaKnown RBP17.15■□□□□ 0.34
SGCB-201ENST00000381431 GJA9P57773 515 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 IKBKEQ14164 716 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 MPP2Q14168 576 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 CASP12Q6UXS9 341 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 ZYG11AQ6WRX3 759 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 CEP44Q9C0F1 390 aa17.15■□□□□ 0.34
SGCB-201ENST00000381431 NDST3O95803 873 aa17.14■□□□□ 0.34
SGCB-201ENST00000381431 GSNP06396 782 aa17.14■□□□□ 0.34
SGCB-201ENST00000381431 VAV1P15498 845 aa17.14■□□□□ 0.34
SGCB-201ENST00000381431 USP46P62068 366 aa17.14■□□□□ 0.34
SGCB-201ENST00000381431 PPM1LQ5SGD2 360 aa17.14■□□□□ 0.34
SGCB-201ENST00000381431 SPPL2BQ8TCT7 592 aa17.14■□□□□ 0.34
SGCB-201ENST00000381431 ACAT2Q9BWD1 397 aa17.14■□□□□ 0.34
SGCB-201ENST00000381431 PIGVQ9NUD9 493 aa17.14■□□□□ 0.34
SGCB-201ENST00000381431 FADS3Q9Y5Q0 445 aa17.14■□□□□ 0.34
SGCB-201ENST00000381431 COMMD3-BMI1R4GMX3 469 aa17.14■□□□□ 0.34
SGCB-201ENST00000381431 SPEF2Q9C093 1822 aa17.14■□□□□ 0.33
SGCB-201ENST00000381431 ARL5CA6NH57 179 aa17.14■□□□□ 0.33
SGCB-201ENST00000381431 ENPEPQ07075 957 aa17.14■□□□□ 0.33
SGCB-201ENST00000381431 TRIM25Q14258 630 aaKnown RBP17.14■□□□□ 0.33
SGCB-201ENST00000381431 USP41Q3LFD5 358 aa17.14■□□□□ 0.33
SGCB-201ENST00000381431 ADCY4Q8NFM4 1077 aa17.14■□□□□ 0.33
SGCB-201ENST00000381431 RHOBTB2Q9BYZ6 727 aa17.14■□□□□ 0.33
SGCB-201ENST00000381431 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.14■□□□□ 0.33
SGCB-201ENST00000381431 SLC25A51Q9H1U9 297 aa17.14■□□□□ 0.33
SGCB-201ENST00000381431 DNAJC28Q9NX36 388 aa17.14■□□□□ 0.33
SGCB-201ENST00000381431 FBXW11Q9UKB1 542 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms