RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 SUDS3Q9H7L9 328 aaPredicted RBP16.02■□□□□ 0.16
VCX3A-201ENST00000381089 TRNAU1APQ9NX07 287 aaKnown RBP16.02■□□□□ 0.16
VCX3A-201ENST00000381089 AP4E1Q9UPM8 1137 aa16.02■□□□□ 0.16
VCX3A-201ENST00000381089 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.01■□□□□ 0.15
VCX3A-201ENST00000381089 CCDC172P0C7W6 258 aa16.01■□□□□ 0.15
VCX3A-201ENST00000381089 RGRP47804 291 aa16.01■□□□□ 0.15
VCX3A-201ENST00000381089 SCNN1BP51168 640 aa16.01■□□□□ 0.15
VCX3A-201ENST00000381089 MAZP56270 477 aaKnown RBP16.01■□□□□ 0.15
VCX3A-201ENST00000381089 OR1D5P58170 312 aa16.01■□□□□ 0.15
VCX3A-201ENST00000381089 RPL7AP62424 266 aaKnown RBP16.01■□□□□ 0.15
VCX3A-201ENST00000381089 CYP4F2P78329 520 aa16.01■□□□□ 0.15
VCX3A-201ENST00000381089 NR1D2Q14995 579 aa16.01■□□□□ 0.15
VCX3A-201ENST00000381089 PPP1R2P3Q6NXS1 205 aa16.01■□□□□ 0.15
VCX3A-201ENST00000381089 CAVIN1Q6NZI2 390 aaKnown RBP16.01■□□□□ 0.15
VCX3A-201ENST00000381089 TMPRSS9Q7Z410 1059 aa16.01■□□□□ 0.15
VCX3A-201ENST00000381089 ZNF438Q7Z4V0 828 aa16.01■□□□□ 0.15
VCX3A-201ENST00000381089 SFTPA2Q8IWL1 248 aa16.01■□□□□ 0.15
VCX3A-201ENST00000381089 ANKRD20A12PQ8NF67 263 aa16.01■□□□□ 0.15
VCX3A-201ENST00000381089 NEK11Q8NG66 645 aa16.01■□□□□ 0.15
VCX3A-201ENST00000381089 DPYSL5Q9BPU6 564 aa16.01■□□□□ 0.15
VCX3A-201ENST00000381089 LGR4Q9BXB1 951 aa16.01■□□□□ 0.15
VCX3A-201ENST00000381089 ZMYND15Q9H091 742 aa16.01■□□□□ 0.15
VCX3A-201ENST00000381089 TAAR2Q9P1P5 351 aa16.01■□□□□ 0.15
VCX3A-201ENST00000381089 PCDHGA3Q9Y5H0 932 aa16.01■□□□□ 0.15
VCX3A-201ENST00000381089 ARHGEF17Q96PE2 2063 aaPredicted RBP16.01■□□□□ 0.15
VCX3A-201ENST00000381089 UBR5O95071 2799 aaPredicted RBP16■□□□□ 0.15
VCX3A-201ENST00000381089 CYSRT1A8MQ03 144 aa16■□□□□ 0.15
VCX3A-201ENST00000381089 A8MX80 341 aa16■□□□□ 0.15
VCX3A-201ENST00000381089 DFFAO00273 331 aa16■□□□□ 0.15
VCX3A-201ENST00000381089 B4GAT1O43505 415 aa16■□□□□ 0.15
VCX3A-201ENST00000381089 CCL4P13236 92 aa16■□□□□ 0.15
VCX3A-201ENST00000381089 CSTF2P33240 577 aaKnown RBP eCLIP16■□□□□ 0.15
VCX3A-201ENST00000381089 IL10RBQ08334 325 aa16■□□□□ 0.15
VCX3A-201ENST00000381089 KRT31Q15323 416 aa16■□□□□ 0.15
VCX3A-201ENST00000381089 HEATR4Q86WZ0 1026 aa16■□□□□ 0.15
VCX3A-201ENST00000381089 AGBL5Q8NDL9 886 aa16■□□□□ 0.15
VCX3A-201ENST00000381089 RCBTB1Q8NDN9 531 aa16■□□□□ 0.15
VCX3A-201ENST00000381089 ENOX1Q8TC92 643 aaKnown RBP16■□□□□ 0.15
VCX3A-201ENST00000381089 HTR3CQ8WXA8 447 aa16■□□□□ 0.15
VCX3A-201ENST00000381089 JPH3Q8WXH2 748 aaPredicted RBP16■□□□□ 0.15
VCX3A-201ENST00000381089 CCDC74BQ96LY2 380 aa16■□□□□ 0.15
VCX3A-201ENST00000381089 AGPAT1Q99943 283 aa16■□□□□ 0.15
VCX3A-201ENST00000381089 NUDT22Q9BRQ3 303 aa16■□□□□ 0.15
VCX3A-201ENST00000381089 FUCA2Q9BTY2 467 aa16■□□□□ 0.15
VCX3A-201ENST00000381089 ASPSCR1Q9BZE9 553 aa16■□□□□ 0.15
VCX3A-201ENST00000381089 CDH19Q9H159 772 aa16■□□□□ 0.15
VCX3A-201ENST00000381089 DHX35Q9H5Z1 703 aaKnown RBP16■□□□□ 0.15
VCX3A-201ENST00000381089 SPATS2LQ9NUQ6 558 aaKnown RBP16■□□□□ 0.15
VCX3A-201ENST00000381089 PTPN13Q12923 2485 aa16■□□□□ 0.15
VCX3A-201ENST00000381089 BSNQ9UPA5 3926 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 IGHV5-10-1A0A0J9YXX1 117 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 TCRBV5S1A1TA0A578 114 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 GOLGA6CA6NDK9 693 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 GOLGA6BA6NDN3 693 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 TRAFD1O14545 582 aaPredicted RBP15.99■□□□□ 0.15
VCX3A-201ENST00000381089 ECEL1O95672 775 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 FGF1P05230 155 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 GOLGA6DP0CG33 693 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 CYP2A6P11509 494 aaPredicted RBP15.99■□□□□ 0.15
VCX3A-201ENST00000381089 PSMA2P25787 234 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 GNPDA1P46926 289 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 PPM1FP49593 454 aaPredicted RBP15.99■□□□□ 0.15
VCX3A-201ENST00000381089 LIMK2P53671 638 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 ZNF235Q14590 738 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 CCDC183Q5T5S1 534 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 ERMARDQ5T6L9 678 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 TMCO4Q5TGY1 634 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 SLC30A9Q6PML9 568 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 RFX8Q6ZV50 586 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 C17orf82Q86X59 251 aaPredicted RBP15.99■□□□□ 0.15
VCX3A-201ENST00000381089 OR4D9Q8NGE8 314 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 PDCD6IPQ8WUM4 868 aaKnown RBP15.99■□□□□ 0.15
VCX3A-201ENST00000381089 COQ10AQ96MF6 247 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 CATSPER2Q96P56 530 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 PSKH2Q96QS6 385 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 DDA1Q9BW61 102 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 TEX101Q9BY14 249 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 GOLGA6AQ9NYA3 693 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 TMEM63CQ9P1W3 806 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 B4GALT6Q9UBX8 382 aa15.99■□□□□ 0.15
VCX3A-201ENST00000381089 EPHB6O15197 1021 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 CAPN5O15484 640 aaPredicted RBP15.98■□□□□ 0.15
VCX3A-201ENST00000381089 SOCS5O75159 536 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 CEACAM5P06731 702 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 FGF3P11487 239 aaPredicted RBP15.98■□□□□ 0.15
VCX3A-201ENST00000381089 WT1P19544 449 aaPredicted RBP15.98■□□□□ 0.15
VCX3A-201ENST00000381089 VIPR1P32241 457 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 HSPA9P38646 679 aaKnown RBP15.98■□□□□ 0.15
VCX3A-201ENST00000381089 CCR10P46092 362 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 ZNF135P52742 658 aaPredicted RBP15.98■□□□□ 0.15
VCX3A-201ENST00000381089 RAB15P59190 212 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 CDK3Q00526 305 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 TLE1Q04724 770 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 KCNAB2Q13303 367 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 CLCA4Q14CN2 919 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 PPP1R15BQ5SWA1 713 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 DENND2CQ68D51 928 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 ACAD10Q6JQN1 1059 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 BBS5Q8N3I7 341 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 LZTR1Q8N653 840 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms