RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 ZMYND15Q9H091 742 aa17.36■□□□□ 0.37
HMGN1-203ENST00000380748 KCTD3Q9Y597 815 aa17.36■□□□□ 0.37
HMGN1-203ENST00000380748 ST14Q9Y5Y6 855 aa17.36■□□□□ 0.37
HMGN1-203ENST00000380748 FBN2P35556 2912 aa17.36■□□□□ 0.37
HMGN1-203ENST00000380748 PPP1R3GB7ZBB8 358 aa17.35■□□□□ 0.37
HMGN1-203ENST00000380748 MKRN2OSH3BPM6 223 aa17.35■□□□□ 0.37
HMGN1-203ENST00000380748 FOXN3O00409 490 aaPredicted RBP17.35■□□□□ 0.37
HMGN1-203ENST00000380748 STK17BO94768 372 aa17.35■□□□□ 0.37
HMGN1-203ENST00000380748 COL8A1P27658 744 aa17.35■□□□□ 0.37
HMGN1-203ENST00000380748 CDH5P33151 784 aaPredicted RBP17.35■□□□□ 0.37
HMGN1-203ENST00000380748 CDO1Q16878 200 aa17.35■□□□□ 0.37
HMGN1-203ENST00000380748 C15orf59Q2T9L4 293 aaPredicted RBP17.35■□□□□ 0.37
HMGN1-203ENST00000380748 CRTC2Q53ET0 693 aaPredicted RBP17.35■□□□□ 0.37
HMGN1-203ENST00000380748 SNAP47Q5SQN1 464 aa17.35■□□□□ 0.37
HMGN1-203ENST00000380748 TMEM71Q6P5X7 295 aa17.35■□□□□ 0.37
HMGN1-203ENST00000380748 BRAT1Q6PJG6 821 aa17.35■□□□□ 0.37
HMGN1-203ENST00000380748 LIPIQ6XZB0 460 aa17.35■□□□□ 0.37
HMGN1-203ENST00000380748 PHLDB2Q86SQ0 1253 aa17.35■□□□□ 0.37
HMGN1-203ENST00000380748 HEATR4Q86WZ0 1026 aa17.35■□□□□ 0.37
HMGN1-203ENST00000380748 DNAAF5Q86Y56 855 aa17.35■□□□□ 0.37
HMGN1-203ENST00000380748 CCDC13Q8IYE1 715 aa17.35■□□□□ 0.37
HMGN1-203ENST00000380748 APMAPQ9HDC9 416 aa17.35■□□□□ 0.37
HMGN1-203ENST00000380748 SRPK3Q9UPE1 567 aa17.35■□□□□ 0.37
HMGN1-203ENST00000380748 ESPL1Q14674 2120 aa17.35■□□□□ 0.37
HMGN1-203ENST00000380748 BICDL2A1A5D9 508 aa17.34■□□□□ 0.37
HMGN1-203ENST00000380748 CFAP69A5D8W1 941 aa17.34■□□□□ 0.37
HMGN1-203ENST00000380748 A8MU76 341 aa17.34■□□□□ 0.37
HMGN1-203ENST00000380748 CEACAM5P06731 702 aa17.34■□□□□ 0.37
HMGN1-203ENST00000380748 PLEKP08567 350 aaPredicted RBP17.34■□□□□ 0.37
HMGN1-203ENST00000380748 ELFN1P0C7U0 828 aa17.34■□□□□ 0.37
HMGN1-203ENST00000380748 F8A1P23610 371 aa17.34■□□□□ 0.37
HMGN1-203ENST00000380748 PPP1R2P41236 205 aa17.34■□□□□ 0.37
HMGN1-203ENST00000380748 STAT5AP42229 794 aa17.34■□□□□ 0.37
HMGN1-203ENST00000380748 GNPDA1P46926 289 aa17.34■□□□□ 0.37
HMGN1-203ENST00000380748 MC2RQ01718 297 aa17.34■□□□□ 0.37
HMGN1-203ENST00000380748 HIVEP3Q5T1R4 2406 aa17.34■□□□□ 0.37
HMGN1-203ENST00000380748 PNCKQ6P2M8 343 aa17.34■□□□□ 0.37
HMGN1-203ENST00000380748 GBP6Q6ZN66 633 aa17.34■□□□□ 0.37
HMGN1-203ENST00000380748 ZNF761Q86XN6 746 aaPredicted RBP17.34■□□□□ 0.37
HMGN1-203ENST00000380748 EFCAB3Q8N7B9 438 aa17.34■□□□□ 0.37
HMGN1-203ENST00000380748 ZNF641Q96N77 438 aaPredicted RBP17.34■□□□□ 0.37
HMGN1-203ENST00000380748 DPYSL5Q9BPU6 564 aa17.34■□□□□ 0.37
HMGN1-203ENST00000380748 PDCL3Q9H2J4 239 aa17.34■□□□□ 0.37
HMGN1-203ENST00000380748 METTL5Q9NRN9 209 aaKnown RBP17.34■□□□□ 0.37
HMGN1-203ENST00000380748 MED13Q9UHV7 2174 aa17.34■□□□□ 0.37
HMGN1-203ENST00000380748 TMEM184BQ9Y519 407 aaPredicted RBP17.34■□□□□ 0.37
HMGN1-203ENST00000380748 TTLL8A6PVC2 850 aa17.33■□□□□ 0.36
HMGN1-203ENST00000380748 DLGAP3O95886 979 aa17.33■□□□□ 0.36
HMGN1-203ENST00000380748 PDGFAP04085 211 aa17.33■□□□□ 0.36
HMGN1-203ENST00000380748 FURINP09958 794 aa17.33■□□□□ 0.36
HMGN1-203ENST00000380748 MYCLP1P12525 358 aaPredicted RBP17.33■□□□□ 0.36
HMGN1-203ENST00000380748 PON1P27169 355 aa17.33■□□□□ 0.36
HMGN1-203ENST00000380748 COPB1P53618 953 aaKnown RBP17.33■□□□□ 0.36
HMGN1-203ENST00000380748 GRM3Q14832 879 aa17.33■□□□□ 0.36
HMGN1-203ENST00000380748 CEACAM20Q6UY09 585 aa17.33■□□□□ 0.36
HMGN1-203ENST00000380748 CCDC185Q8N715 623 aa17.33■□□□□ 0.36
HMGN1-203ENST00000380748 CPT1CQ8TCG5 803 aa17.33■□□□□ 0.36
HMGN1-203ENST00000380748 RNF31Q96EP0 1072 aa17.33■□□□□ 0.36
HMGN1-203ENST00000380748 SIX2Q9NPC8 291 aa17.33■□□□□ 0.36
HMGN1-203ENST00000380748 TRNAU1APQ9NX07 287 aaKnown RBP17.33■□□□□ 0.36
HMGN1-203ENST00000380748 PDP2Q9P2J9 529 aa17.33■□□□□ 0.36
HMGN1-203ENST00000380748 DNAJC12Q9UKB3 198 aa17.33■□□□□ 0.36
HMGN1-203ENST00000380748 SUFUQ9UMX1 484 aa17.33■□□□□ 0.36
HMGN1-203ENST00000380748 SHANK1Q9Y566 2161 aa17.33■□□□□ 0.36
HMGN1-203ENST00000380748 A8MX80 341 aa17.32■□□□□ 0.36
HMGN1-203ENST00000380748 RASA4BC9J798 803 aa17.32■□□□□ 0.36
HMGN1-203ENST00000380748 PDE2AO00408 941 aaPredicted RBP17.32■□□□□ 0.36
HMGN1-203ENST00000380748 RASA4O43374 803 aa17.32■□□□□ 0.36
HMGN1-203ENST00000380748 DCTP40126 519 aa17.32■□□□□ 0.36
HMGN1-203ENST00000380748 RGRP47804 291 aa17.32■□□□□ 0.36
HMGN1-203ENST00000380748 PPM1FP49593 454 aaPredicted RBP17.32■□□□□ 0.36
HMGN1-203ENST00000380748 CTBSQ01459 385 aa17.32■□□□□ 0.36
HMGN1-203ENST00000380748 RAPGEF1Q13905 1077 aa17.32■□□□□ 0.36
HMGN1-203ENST00000380748 EXOC3L4Q17RC7 722 aa17.32■□□□□ 0.36
HMGN1-203ENST00000380748 CCDC14Q49A88 953 aa17.32■□□□□ 0.36
HMGN1-203ENST00000380748 TAF3Q5VWG9 929 aa17.32■□□□□ 0.36
HMGN1-203ENST00000380748 RTL3Q8N8U3 475 aaKnown RBP17.32■□□□□ 0.36
HMGN1-203ENST00000380748 FRMD8Q9BZ67 464 aaPredicted RBP17.32■□□□□ 0.36
HMGN1-203ENST00000380748 TRIT1Q9H3H1 467 aaKnown RBP17.32■□□□□ 0.36
HMGN1-203ENST00000380748 CUEDC1Q9NWM3 386 aaPredicted RBP17.32■□□□□ 0.36
HMGN1-203ENST00000380748 UBA2Q9UBT2 640 aaPredicted RBP17.32■□□□□ 0.36
HMGN1-203ENST00000380748 TLK1Q9UKI8 766 aa17.32■□□□□ 0.36
HMGN1-203ENST00000380748 PLEKHM1Q9Y4G2 1056 aa17.32■□□□□ 0.36
HMGN1-203ENST00000380748 RPS6KL1Q9Y6S9 549 aa17.32■□□□□ 0.36
HMGN1-203ENST00000380748 C2CD3Q4AC94 2353 aa17.31■□□□□ 0.36
HMGN1-203ENST00000380748 ZNF106Q9H2Y7 1883 aaKnown RBP17.31■□□□□ 0.36
HMGN1-203ENST00000380748 MAN1A1P33908 653 aa17.31■□□□□ 0.36
HMGN1-203ENST00000380748 ADCY8P40145 1251 aa17.31■□□□□ 0.36
HMGN1-203ENST00000380748 GPLD1P80108 840 aa17.31■□□□□ 0.36
HMGN1-203ENST00000380748 ERV3-1Q14264 604 aa17.31■□□□□ 0.36
HMGN1-203ENST00000380748 ACOX1Q15067 660 aa17.31■□□□□ 0.36
HMGN1-203ENST00000380748 AFMIDQ63HM1 303 aa17.31■□□□□ 0.36
HMGN1-203ENST00000380748 DPPA4Q7L190 304 aa17.31■□□□□ 0.36
HMGN1-203ENST00000380748 ARCQ7LC44 396 aa17.31■□□□□ 0.36
HMGN1-203ENST00000380748 ARHGAP22Q7Z5H3 698 aa17.31■□□□□ 0.36
HMGN1-203ENST00000380748 TMEM135Q86UB9 458 aa17.31■□□□□ 0.36
HMGN1-203ENST00000380748 FAM114A1Q8IWE2 563 aa17.31■□□□□ 0.36
HMGN1-203ENST00000380748 FAM71AQ8IYT1 594 aa17.31■□□□□ 0.36
HMGN1-203ENST00000380748 PYROXD2Q8N2H3 581 aa17.31■□□□□ 0.36
HMGN1-203ENST00000380748 RXFP2Q8WXD0 754 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms