RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 PRAMEF14Q5SWL7 426 aa9.28□□□□□ -0.92
HMGN1-202ENST00000380747 ARMC12Q5T9G4 340 aa9.28□□□□□ -0.92
HMGN1-202ENST00000380747 GCNT7Q6ZNI0 430 aa9.28□□□□□ -0.92
HMGN1-202ENST00000380747 BBS12Q6ZW61 710 aa9.28□□□□□ -0.92
HMGN1-202ENST00000380747 ZC3H18Q86VM9 953 aaKnown RBP9.28□□□□□ -0.92
HMGN1-202ENST00000380747 CNTD1Q8N815 330 aa9.28□□□□□ -0.92
HMGN1-202ENST00000380747 AGAP3Q96P47 875 aa9.28□□□□□ -0.92
HMGN1-202ENST00000380747 HERPUD2Q9BSE4 406 aa9.28□□□□□ -0.92
HMGN1-202ENST00000380747 C1QTNF7Q9BXJ2 289 aa9.28□□□□□ -0.92
HMGN1-202ENST00000380747 GDF3Q9NR23 364 aa9.28□□□□□ -0.92
HMGN1-202ENST00000380747 DNAAF2Q9NVR5 837 aaKnown RBP9.28□□□□□ -0.92
HMGN1-202ENST00000380747 PLA2G2EQ9NZK7 142 aa9.28□□□□□ -0.92
HMGN1-202ENST00000380747 FNDC3AQ9Y2H6 1198 aaKnown RBP9.28□□□□□ -0.92
HMGN1-202ENST00000380747 COQ6Q9Y2Z9 468 aa9.28□□□□□ -0.92
HMGN1-202ENST00000380747 A6NNZ2 444 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 HACD1B0YJ81 288 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 ESPNB1AK53 854 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 APOC4-APOC2K7ER74 178 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 MAGEC1O60732 1142 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 TJP3O95049 919 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 PGLSO95336 258 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 APOC2P02655 101 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 ELFN1P0C7U0 828 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 CYP2A6P11509 494 aaPredicted RBP9.27□□□□□ -0.93
HMGN1-202ENST00000380747 C6P13671 934 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 NFKBIAP25963 317 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 VIPR1P32241 457 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 PTPN7P35236 360 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 CD86P42081 329 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 LIG3P49916 1009 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 EPHB1P54762 984 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 SIM1P81133 766 aaPredicted RBP9.27□□□□□ -0.93
HMGN1-202ENST00000380747 OVGP1Q12889 678 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 DENND2CQ68D51 928 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 ALG1LQ6GMV1 187 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 KDM7AQ6ZMT4 941 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 Q6ZSR6 202 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 DPPA4Q7L190 304 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 PTAR1Q7Z6K3 402 aaPredicted RBP9.27□□□□□ -0.93
HMGN1-202ENST00000380747 RAB44Q7Z6P3 723 aaPredicted RBP9.27□□□□□ -0.93
HMGN1-202ENST00000380747 IQCHQ86VS3 1027 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 SPATS2Q86XZ4 545 aaKnown RBP9.27□□□□□ -0.93
HMGN1-202ENST00000380747 TMEM145Q8NBT3 493 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 LPCAT1Q8NF37 534 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 OR13H1Q8NG92 308 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 ARRDC2Q8TBH0 407 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 ASB12Q8WXK4 309 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 HES6Q96HZ4 224 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 BMFQ96LC9 184 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 QKIQ96PU8 341 aaKnown RBP eCLIP9.27□□□□□ -0.933e-41■■■■■ 75.6
HMGN1-202ENST00000380747 LENG8Q96PV6 779 aaPredicted RBP9.27□□□□□ -0.93
HMGN1-202ENST00000380747 ALS2CR12Q96Q35 445 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 ELF4Q99607 663 aaPredicted RBP9.27□□□□□ -0.93
HMGN1-202ENST00000380747 FAM118BQ9BPY3 351 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 TDRD1Q9BXT4 1180 aaKnown RBP9.27□□□□□ -0.93
HMGN1-202ENST00000380747 C10orf88Q9H8K7 445 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 TM7SF3Q9NS93 570 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 KLHL8Q9P2G9 620 aaPredicted RBP9.27□□□□□ -0.93
HMGN1-202ENST00000380747 B4GALT6Q9UBX8 382 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 PHTF1Q9UMS5 762 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 DOLKQ9UPQ8 538 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 CHKBQ9Y259 395 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 EFR3BQ9Y2G0 817 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 PPP2R2CQ9Y2T4 447 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 HS3ST3A1Q9Y663 406 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 PLXNA2O75051 1894 aa9.27□□□□□ -0.93
HMGN1-202ENST00000380747 PI4KAP42356 2102 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 PCDH15Q96QU1 1955 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 GOLGA6L9A6NEM1 432 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 POM121BA6NF01 834 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 F5H423 210 aaPredicted RBP9.26□□□□□ -0.93
HMGN1-202ENST00000380747 MTSS1O43312 755 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 SH3BP5O60239 455 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 PCCBP05166 539 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 PDHA1P08559 390 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 ALPIP09923 528 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 CD59P13987 128 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 PTPN3P26045 913 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 RBL1P28749 1068 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 IGFALSP35858 605 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 CCT8P50990 548 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 RAB15P59190 212 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 EIF3EP60228 445 aaKnown RBP9.26□□□□□ -0.93
HMGN1-202ENST00000380747 OTUD4Q01804 1114 aaKnown RBP9.26□□□□□ -0.93
HMGN1-202ENST00000380747 WASHC5Q12768 1159 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 RALGDSQ12967 914 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 SLC14A1Q13336 389 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 XRCC4Q13426 336 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 IHHQ14623 411 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 LRRC14Q15048 493 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 ACOX1Q15067 660 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 NOMO1Q15155 1222 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 PTPRRQ15256 657 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 IRF4Q15306 451 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 RPS6KA1Q15418 735 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 SOWAHCQ53LP3 525 aaPredicted RBP9.26□□□□□ -0.93
HMGN1-202ENST00000380747 TEX44Q53QW1 395 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 SEL1L2Q5TEA6 688 aa9.26□□□□□ -0.93
HMGN1-202ENST00000380747 DARS2Q6PI48 645 aaKnown RBP9.26□□□□□ -0.93
HMGN1-202ENST00000380747 KYAT3Q6YP21 454 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms