RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 BRSK1Q8TDC3 778 aa18.81■□□□□ 0.6
SMN2-202ENST00000380742 KLK6Q92876 244 aa18.81■□□□□ 0.6
SMN2-202ENST00000380742 COQ10AQ96MF6 247 aa18.81■□□□□ 0.6
SMN2-202ENST00000380742 GPR63Q9BZJ6 419 aa18.81■□□□□ 0.6
SMN2-202ENST00000380742 TRABDQ9H4I3 376 aa18.81■□□□□ 0.6
SMN2-202ENST00000380742 XAB2Q9HCS7 855 aaKnown RBP18.81■□□□□ 0.6
SMN2-202ENST00000380742 PCDHGA2Q9Y5H1 932 aa18.81■□□□□ 0.6
SMN2-202ENST00000380742 ARL5AQ9Y689 179 aa18.81■□□□□ 0.6
SMN2-202ENST00000380742 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.8■□□□□ 0.6
SMN2-202ENST00000380742 AP3B1O00203 1094 aa18.8■□□□□ 0.6
SMN2-202ENST00000380742 NDC80O14777 642 aa18.8■□□□□ 0.6
SMN2-202ENST00000380742 LDB2O43679 373 aa18.8■□□□□ 0.6
SMN2-202ENST00000380742 BUD23O43709 281 aaKnown RBP18.8■□□□□ 0.6
SMN2-202ENST00000380742 SLC4A1P02730 911 aa18.8■□□□□ 0.6
SMN2-202ENST00000380742 CNR2P34972 360 aa18.8■□□□□ 0.6
SMN2-202ENST00000380742 PLTPP55058 493 aa18.8■□□□□ 0.6
SMN2-202ENST00000380742 CRADDP78560 199 aa18.8■□□□□ 0.6
SMN2-202ENST00000380742 TAF1AQ15573 450 aaPredicted RBP18.8■□□□□ 0.6
SMN2-202ENST00000380742 CCDC38Q502W7 563 aa18.8■□□□□ 0.6
SMN2-202ENST00000380742 SLC41A1Q8IVJ1 513 aa18.8■□□□□ 0.6
SMN2-202ENST00000380742 TMEFF1Q8IYR6 380 aa18.8■□□□□ 0.6
SMN2-202ENST00000380742 AGGF1Q8N302 714 aaeCLIP18.8■□□□□ 0.6
SMN2-202ENST00000380742 CADM4Q8NFZ8 388 aa18.8■□□□□ 0.6
SMN2-202ENST00000380742 FBXO25Q8TCJ0 367 aa18.8■□□□□ 0.6
SMN2-202ENST00000380742 BIRC7Q96CA5 298 aa18.8■□□□□ 0.6
SMN2-202ENST00000380742 C1QTNF2Q9BXJ5 285 aa18.8■□□□□ 0.6
SMN2-202ENST00000380742 EPC1Q9H2F5 836 aa18.8■□□□□ 0.6
SMN2-202ENST00000380742 EBF2Q9HAK2 575 aa18.8■□□□□ 0.6
SMN2-202ENST00000380742 GDF3Q9NR23 364 aa18.8■□□□□ 0.6
SMN2-202ENST00000380742 FAM114A2Q9NRY5 505 aa18.8■□□□□ 0.6
SMN2-202ENST00000380742 SYBUQ9NX95 663 aa18.8■□□□□ 0.6
SMN2-202ENST00000380742 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.8■□□□□ 0.6
SMN2-202ENST00000380742 BFARQ9NZS9 450 aa18.8■□□□□ 0.6
SMN2-202ENST00000380742 KCTD3Q9Y597 815 aa18.8■□□□□ 0.6
SMN2-202ENST00000380742 METTL12A8MUP2 240 aa18.79■□□□□ 0.6
SMN2-202ENST00000380742 PSMD11O00231 422 aa18.79■□□□□ 0.6
SMN2-202ENST00000380742 LATO43561 262 aa18.79■□□□□ 0.6
SMN2-202ENST00000380742 LZTS3O60299 673 aaPredicted RBP18.79■□□□□ 0.6
SMN2-202ENST00000380742 TM7SF2O76062 418 aa18.79■□□□□ 0.6
SMN2-202ENST00000380742 FSBPO95073 299 aa18.79■□□□□ 0.6
SMN2-202ENST00000380742 HMGCLP35914 325 aa18.79■□□□□ 0.6
SMN2-202ENST00000380742 CCR5P51681 352 aa18.79■□□□□ 0.6
SMN2-202ENST00000380742 CREB5Q02930 508 aa18.79■□□□□ 0.6
SMN2-202ENST00000380742 TCF15Q12870 199 aa18.79■□□□□ 0.6
SMN2-202ENST00000380742 PTPRCAPQ14761 206 aa18.79■□□□□ 0.6
SMN2-202ENST00000380742 ACOX1Q15067 660 aa18.79■□□□□ 0.6
SMN2-202ENST00000380742 MSS51Q4VC12 460 aa18.79■□□□□ 0.6
SMN2-202ENST00000380742 Q6ZVL8 140 aa18.79■□□□□ 0.6
SMN2-202ENST00000380742 TECPR1Q7Z6L1 1165 aa18.79■□□□□ 0.6
SMN2-202ENST00000380742 MPP5Q8N3R9 675 aa18.79■□□□□ 0.6
SMN2-202ENST00000380742 SIGLEC10Q96LC7 697 aa18.79■□□□□ 0.6
SMN2-202ENST00000380742 RANBP9Q96S59 729 aa18.79■□□□□ 0.6
SMN2-202ENST00000380742 SLC17A9Q9BYT1 436 aa18.79■□□□□ 0.6
SMN2-202ENST00000380742 PCED1AQ9H1Q7 454 aa18.79■□□□□ 0.6
SMN2-202ENST00000380742 DUSP15Q9H1R2 295 aaPredicted RBP18.79■□□□□ 0.6
SMN2-202ENST00000380742 ZDHHC18Q9NUE0 388 aa18.79■□□□□ 0.6
SMN2-202ENST00000380742 IL17CQ9P0M4 197 aa18.79■□□□□ 0.6
SMN2-202ENST00000380742 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.79■□□□□ 0.6
SMN2-202ENST00000380742 VPS13AQ96RL7 3174 aa18.78■□□□□ 0.6
SMN2-202ENST00000380742 USP34Q70CQ2 3546 aa18.78■□□□□ 0.6
SMN2-202ENST00000380742 BANF1O75531 89 aa18.78■□□□□ 0.6
SMN2-202ENST00000380742 RECQL5O94762 991 aaPredicted RBP18.78■□□□□ 0.6
SMN2-202ENST00000380742 CRTAMO95727 393 aa18.78■□□□□ 0.6
SMN2-202ENST00000380742 PAK4O96013 591 aaPredicted RBP18.78■□□□□ 0.6
SMN2-202ENST00000380742 ADRA1DP25100 572 aa18.78■□□□□ 0.6
SMN2-202ENST00000380742 ETV3P41162 512 aa18.78■□□□□ 0.6
SMN2-202ENST00000380742 SPINT3P49223 89 aa18.78■□□□□ 0.6
SMN2-202ENST00000380742 CARSP49589 748 aaKnown RBP18.78■□□□□ 0.6
SMN2-202ENST00000380742 CAV1Q03135 178 aa18.78■□□□□ 0.6
SMN2-202ENST00000380742 SEPT6Q14141 434 aa18.78■□□□□ 0.6
SMN2-202ENST00000380742 PLK5Q496M5 336 aa18.78■□□□□ 0.6
SMN2-202ENST00000380742 PMS2CLQ68D20 193 aa18.78■□□□□ 0.6
SMN2-202ENST00000380742 C11orf74Q86VG3 221 aa18.78■□□□□ 0.6
SMN2-202ENST00000380742 ZCCHC9Q8N567 271 aaKnown RBP18.78■□□□□ 0.6
SMN2-202ENST00000380742 IFT81Q8WYA0 676 aa18.78■□□□□ 0.6
SMN2-202ENST00000380742 PRRX2Q99811 253 aa18.78■□□□□ 0.6
SMN2-202ENST00000380742 FRMD8Q9BZ67 464 aaPredicted RBP18.78■□□□□ 0.6
SMN2-202ENST00000380742 IL22Q9GZX6 179 aa18.78■□□□□ 0.6
SMN2-202ENST00000380742 BPIFA1Q9NP55 256 aa18.78■□□□□ 0.6
SMN2-202ENST00000380742 PLXNB3Q9ULL4 1909 aa18.77■□□□□ 0.6
SMN2-202ENST00000380742 MROH6A6NGR9 719 aa18.77■□□□□ 0.6
SMN2-202ENST00000380742 SDR42E2A6NKP2 422 aa18.77■□□□□ 0.6
SMN2-202ENST00000380742 C2orf81A6NN90 581 aa18.77■□□□□ 0.6
SMN2-202ENST00000380742 PPFIA2O75334 1257 aa18.77■□□□□ 0.6
SMN2-202ENST00000380742 LPOP22079 712 aaPredicted RBP18.77■□□□□ 0.6
SMN2-202ENST00000380742 ECHS1P30084 290 aa18.77■□□□□ 0.6
SMN2-202ENST00000380742 ZNF140P52738 457 aaPredicted RBP18.77■□□□□ 0.6
SMN2-202ENST00000380742 DHX9Q08211 1270 aaKnown RBP18.77■□□□□ 0.6
SMN2-202ENST00000380742 AGERQ15109 404 aa18.77■□□□□ 0.6
SMN2-202ENST00000380742 HIF1AQ16665 826 aa18.77■□□□□ 0.6
SMN2-202ENST00000380742 PCID2Q5JVF3 399 aa18.77■□□□□ 0.6
SMN2-202ENST00000380742 LPCAT2Q7L5N7 544 aa18.77■□□□□ 0.6
SMN2-202ENST00000380742 OR4K2Q8NGD2 314 aa18.77■□□□□ 0.6
SMN2-202ENST00000380742 OR13C4Q8NGS5 318 aa18.77■□□□□ 0.6
SMN2-202ENST00000380742 DTD2Q96FN9 168 aa18.77■□□□□ 0.6
SMN2-202ENST00000380742 ZC3H10Q96K80 434 aaKnown RBP18.77■□□□□ 0.6
SMN2-202ENST00000380742 HSPA12BQ96MM6 686 aa18.77■□□□□ 0.6
SMN2-202ENST00000380742 ORAI3Q9BRQ5 295 aa18.77■□□□□ 0.6
SMN2-202ENST00000380742 ANKZF1Q9H8Y5 726 aa18.77■□□□□ 0.6
SMN2-202ENST00000380742 CHRAC1Q9NRG0 131 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms