RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 SCML2Q9UQR0 700 aa16.34■□□□□ 0.21
VPS16-203ENST00000380469 MYOCOSA0A1B0GUC4 107 aa16.34■□□□□ 0.21
VPS16-203ENST00000380469 A0A1B0GVG6 124 aa16.34■□□□□ 0.21
VPS16-203ENST00000380469 TTC24A2A3L6 582 aaPredicted RBP16.34■□□□□ 0.21
VPS16-203ENST00000380469 OR51F1A6NGY5 319 aa16.34■□□□□ 0.21
VPS16-203ENST00000380469 RPLP2P05387 115 aaKnown RBP16.34■□□□□ 0.21
VPS16-203ENST00000380469 OR4Q2P0C623 313 aa16.34■□□□□ 0.21
VPS16-203ENST00000380469 HOXB8P17481 243 aaPredicted RBP16.34■□□□□ 0.21
VPS16-203ENST00000380469 GPX3P22352 226 aa16.34■□□□□ 0.21
VPS16-203ENST00000380469 FGFR3P22607 806 aa16.34■□□□□ 0.21
VPS16-203ENST00000380469 USP46P62068 366 aa16.34■□□□□ 0.21
VPS16-203ENST00000380469 TXNL4AP83876 142 aaKnown RBP16.34■□□□□ 0.21
VPS16-203ENST00000380469 CACNB2Q08289 660 aaPredicted RBP16.34■□□□□ 0.21
VPS16-203ENST00000380469 BIRC2Q13490 618 aa16.34■□□□□ 0.21
VPS16-203ENST00000380469 MS4A13Q5J8X5 152 aa16.34■□□□□ 0.21
VPS16-203ENST00000380469 C6orf10Q5SRN2 563 aa16.34■□□□□ 0.21
VPS16-203ENST00000380469 MSANTD2Q6P1R3 559 aa16.34■□□□□ 0.21
VPS16-203ENST00000380469 C8orf82Q6P1X6 216 aaPredicted RBP16.34■□□□□ 0.21
VPS16-203ENST00000380469 CHERPQ8IWX8 916 aaKnown RBP16.34■□□□□ 0.21
VPS16-203ENST00000380469 NUP93Q8N1F7 819 aa16.34■□□□□ 0.21
VPS16-203ENST00000380469 TEX26Q8N6G2 289 aa16.34■□□□□ 0.21
VPS16-203ENST00000380469 ZFP28Q8NHY6 868 aa16.34■□□□□ 0.21
VPS16-203ENST00000380469 PTERQ96BW5 349 aa16.34■□□□□ 0.21
VPS16-203ENST00000380469 UHRF1Q96T88 793 aaPredicted RBP16.34■□□□□ 0.21
VPS16-203ENST00000380469 NOL11Q9H8H0 719 aaKnown RBP16.34■□□□□ 0.21
VPS16-203ENST00000380469 FBRSL1Q9HCM7 1045 aaKnown RBP16.34■□□□□ 0.21
VPS16-203ENST00000380469 PCDHB8Q9UN66 801 aa16.34■□□□□ 0.21
VPS16-203ENST00000380469 KCTD3Q9Y597 815 aa16.34■□□□□ 0.21
VPS16-203ENST00000380469 NLRC5Q86WI3 1866 aa16.33■□□□□ 0.21
VPS16-203ENST00000380469 LDB2O43679 373 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 CNTN5O94779 1100 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 CD1DP15813 335 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 FDXRP22570 491 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 CDH13P55290 713 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 CYTH1Q15438 398 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 UGT3A2Q3SY77 523 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 MTX3Q5HYI7 312 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 MRNIPQ6NTE8 343 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 CYHR1Q6ZMK1 362 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 AMIGO2Q86SJ2 522 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 ZNF683Q8IZ20 524 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 PTGR2Q8N8N7 351 aaPredicted RBP16.33■□□□□ 0.2
VPS16-203ENST00000380469 ATP6V0D2Q8N8Y2 350 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 TSPAN14Q8NG11 270 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 OR2T34Q8NGX1 318 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 OR2T3Q8NH03 318 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 C3orf30Q96M34 536 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 TBATAQ96M53 351 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 ADAM2Q99965 735 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 HOPXQ9BPY8 73 aaPredicted RBP16.33■□□□□ 0.2
VPS16-203ENST00000380469 TMEM79Q9BSE2 394 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 FBXO44Q9H4M3 255 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 CNOT6Q9ULM6 557 aaKnown RBP16.33■□□□□ 0.2
VPS16-203ENST00000380469 NDUFAF1Q9Y375 327 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 TDRD15B5MCY1 1934 aaKnown RBP16.33■□□□□ 0.2
VPS16-203ENST00000380469 A0A0J9YYE9 177 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 LOC285095A0A1B0GVY8 99 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 CD3EAPO15446 510 aaKnown RBP16.33■□□□□ 0.2
VPS16-203ENST00000380469 FGF4P08620 206 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 ALDOCP09972 364 aaKnown RBP16.33■□□□□ 0.2
VPS16-203ENST00000380469 ETFBP38117 255 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 SH3BP2P78314 561 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 TMEM259Q4ZIN3 620 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 ALFQ53S48 1182 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 IRAK1BP1Q5VVH5 260 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 KRT80Q6KB66 452 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 PRMT9Q6P2P2 845 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 ZBTB49Q6ZSB9 765 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 FUNDC1Q8IVP5 155 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 DCP1BQ8IZD4 617 aaKnown RBP16.33■□□□□ 0.2
VPS16-203ENST00000380469 TRIM15Q9C019 465 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 RBM38Q9H0Z9 239 aaKnown RBP16.33■□□□□ 0.2
VPS16-203ENST00000380469 MID1IP1Q9NPA3 183 aa16.33■□□□□ 0.2
VPS16-203ENST00000380469 ZNF839A8K0R7 811 aa16.32■□□□□ 0.2
VPS16-203ENST00000380469 F8W810 466 aa16.32■□□□□ 0.2
VPS16-203ENST00000380469 NR5A2O00482 541 aa16.32■□□□□ 0.2
VPS16-203ENST00000380469 GOT2P00505 430 aaKnown RBP16.32■□□□□ 0.2
VPS16-203ENST00000380469 ASLP04424 464 aa16.32■□□□□ 0.2
VPS16-203ENST00000380469 ATXN1LP0C7T5 689 aaKnown RBP16.32■□□□□ 0.2
VPS16-203ENST00000380469 GRIA3P42263 894 aa16.32■□□□□ 0.2
VPS16-203ENST00000380469 TNK2Q07912 1038 aa16.32■□□□□ 0.2
VPS16-203ENST00000380469 EFEMP1Q12805 493 aa16.32■□□□□ 0.2
VPS16-203ENST00000380469 IHHQ14623 411 aa16.32■□□□□ 0.2
VPS16-203ENST00000380469 POLD3Q15054 466 aaPredicted RBP16.32■□□□□ 0.2
VPS16-203ENST00000380469 SDHAF4Q5VUM1 108 aa16.32■□□□□ 0.2
VPS16-203ENST00000380469 BORAQ6PGQ7 559 aa16.32■□□□□ 0.2
VPS16-203ENST00000380469 MIER2Q8N344 545 aa16.32■□□□□ 0.2
VPS16-203ENST00000380469 TRIML2Q8N7C3 387 aa16.32■□□□□ 0.2
VPS16-203ENST00000380469 ARRDC2Q8TBH0 407 aa16.32■□□□□ 0.2
VPS16-203ENST00000380469 CIB1Q99828 191 aa16.32■□□□□ 0.2
VPS16-203ENST00000380469 CCT7Q99832 543 aa16.32■□□□□ 0.2
VPS16-203ENST00000380469 SLC39A3Q9BRY0 314 aa16.32■□□□□ 0.2
VPS16-203ENST00000380469 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.32■□□□□ 0.2
VPS16-203ENST00000380469 RNF11Q9Y3C5 154 aa16.32■□□□□ 0.2
VPS16-203ENST00000380469 DNAJC15Q9Y5T4 150 aa16.32■□□□□ 0.2
VPS16-203ENST00000380469 TRPM7Q96QT4 1865 aa16.32■□□□□ 0.2
VPS16-203ENST00000380469 AZIN1O14977 448 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 ANGPT2O15123 496 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 AKAP10O43572 662 aa16.31■□□□□ 0.2
VPS16-203ENST00000380469 CDK14O94921 469 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 749.1 ms