RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 UBXN10Q96LJ8 280 aa15.06■□□□□ 0
SNX2-201ENST00000379516 ILKAPQ9H0C8 392 aaPredicted RBP15.06■□□□□ 0
SNX2-201ENST00000379516 CDH19Q9H159 772 aa15.06■□□□□ 0
SNX2-201ENST00000379516 POLR3BQ9NW08 1133 aaPredicted RBP15.06■□□□□ 0
SNX2-201ENST00000379516 LNPEPQ9UIQ6 1025 aa15.06■□□□□ 0
SNX2-201ENST00000379516 CORO1CQ9ULV4 474 aaPredicted RBP15.06■□□□□ 0
SNX2-201ENST00000379516 UBA6A0AVT1 1052 aaPredicted RBP15.05■□□□□ 0
SNX2-201ENST00000379516 LINC01553A4QN01 128 aa15.05■□□□□ 0
SNX2-201ENST00000379516 STX7O15400 261 aaKnown RBP15.05■□□□□ 0
SNX2-201ENST00000379516 FZD6O60353 706 aa15.05■□□□□ 0
SNX2-201ENST00000379516 HNRNPCL1O60812 293 aaKnown RBP15.05■□□□□ 0
SNX2-201ENST00000379516 FGF19O95750 216 aa15.05■□□□□ 0
SNX2-201ENST00000379516 RHOP08100 348 aa15.05■□□□□ 0
SNX2-201ENST00000379516 PTPN4P29074 926 aa15.05■□□□□ 0
SNX2-201ENST00000379516 HNRNPH1P31943 449 aaKnown RBP15.05■□□□□ 0
SNX2-201ENST00000379516 CCR10P46092 362 aa15.05■□□□□ 0
SNX2-201ENST00000379516 IDH3AP50213 366 aa15.05■□□□□ 0
SNX2-201ENST00000379516 AP1S1P61966 158 aa15.05■□□□□ 0
SNX2-201ENST00000379516 ASPHQ12797 758 aa15.05■□□□□ 0
SNX2-201ENST00000379516 RCN2Q14257 317 aa15.05■□□□□ 0
SNX2-201ENST00000379516 TYSND1Q2T9J0 566 aa15.05■□□□□ 0
SNX2-201ENST00000379516 CFAP157Q5JU67 520 aa15.05■□□□□ 0
SNX2-201ENST00000379516 ARMC12Q5T9G4 340 aa15.05■□□□□ 0
SNX2-201ENST00000379516 VWA5B1Q5TIE3 1220 aa15.05■□□□□ 0
SNX2-201ENST00000379516 PARP9Q8IXQ6 854 aa15.05■□□□□ 0
SNX2-201ENST00000379516 RAB3IPQ96QF0 476 aaPredicted RBP15.05■□□□□ 0
SNX2-201ENST00000379516 INTS10Q9NVR2 710 aaKnown RBP15.05■□□□□ 0
SNX2-201ENST00000379516 DNAJC28Q9NX36 388 aa15.05■□□□□ 0
SNX2-201ENST00000379516 EVLQ9UI08 416 aaPredicted RBP15.05■□□□□ 0
SNX2-201ENST00000379516 FKBPLQ9UIM3 349 aa15.05■□□□□ 0
SNX2-201ENST00000379516 FNDC3AQ9Y2H6 1198 aaKnown RBP15.05■□□□□ 0
SNX2-201ENST00000379516 MTF2Q9Y483 593 aaPredicted RBP15.05■□□□□ 0
SNX2-201ENST00000379516 ZNF195O14628 629 aa15.05■□□□□ -0
SNX2-201ENST00000379516 MGRN1O60291 552 aa15.05■□□□□ -0
SNX2-201ENST00000379516 DIAPH2O60879 1101 aa15.05■□□□□ -0
SNX2-201ENST00000379516 MOSPD3O75425 235 aa15.05■□□□□ -0
SNX2-201ENST00000379516 SERPINA6P08185 405 aa15.05■□□□□ -0
SNX2-201ENST00000379516 RBP1P09455 135 aa15.05■□□□□ -0
SNX2-201ENST00000379516 ESRRAP11474 423 aaPredicted RBP15.05■□□□□ -0
SNX2-201ENST00000379516 ALOX15P16050 662 aaPredicted RBP15.05■□□□□ -0
SNX2-201ENST00000379516 EPCAMP16422 314 aa15.05■□□□□ -0
SNX2-201ENST00000379516 CTPS1P17812 591 aa15.05■□□□□ -0
SNX2-201ENST00000379516 FDXRP22570 491 aa15.05■□□□□ -0
SNX2-201ENST00000379516 CALB2P22676 271 aa15.05■□□□□ -0
SNX2-201ENST00000379516 ATP5F1P24539 256 aaPredicted RBP15.05■□□□□ -0
SNX2-201ENST00000379516 EPHA5P54756 1037 aa15.05■□□□□ -0
SNX2-201ENST00000379516 TUBB3Q13509 450 aa15.05■□□□□ -0
SNX2-201ENST00000379516 ACAP2Q15057 778 aa15.05■□□□□ -0
SNX2-201ENST00000379516 ARHGAP15Q53QZ3 475 aa15.05■□□□□ -0
SNX2-201ENST00000379516 ARL13AQ5H913 290 aaPredicted RBP15.05■□□□□ -0
SNX2-201ENST00000379516 FAM91A1Q658Y4 838 aa15.05■□□□□ -0
SNX2-201ENST00000379516 PAF1Q8N7H5 531 aa15.05■□□□□ -0
SNX2-201ENST00000379516 CCNYL1Q8N7R7 359 aa15.05■□□□□ -0
SNX2-201ENST00000379516 TXNDC5Q8NBS9 432 aaKnown RBP15.05■□□□□ -0
SNX2-201ENST00000379516 RIN3Q8TB24 985 aa15.05■□□□□ -0
SNX2-201ENST00000379516 USP13Q92995 863 aaPredicted RBP15.05■□□□□ -0
SNX2-201ENST00000379516 MYO19Q96H55 970 aa15.05■□□□□ -0
SNX2-201ENST00000379516 RPL10LQ96L21 214 aaKnown RBP15.05■□□□□ -0
SNX2-201ENST00000379516 AARSD1Q9BTE6 412 aaKnown RBP15.05■□□□□ -0
SNX2-201ENST00000379516 COG4Q9H9E3 785 aa15.05■□□□□ -0
SNX2-201ENST00000379516 ABCB8Q9NUT2 735 aa15.05■□□□□ -0
SNX2-201ENST00000379516 HACD3Q9P035 362 aa15.05■□□□□ -0
SNX2-201ENST00000379516 INTS6Q9UL03 887 aaKnown RBP15.05■□□□□ -0
SNX2-201ENST00000379516 RAP2CQ9Y3L5 183 aa15.05■□□□□ -0
SNX2-201ENST00000379516 RWDD3Q9Y3V2 267 aa15.05■□□□□ -0
SNX2-201ENST00000379516 NEMP2A6NFY4 417 aa15.04■□□□□ -0
SNX2-201ENST00000379516 TRAFD1O14545 582 aaPredicted RBP15.04■□□□□ -0
SNX2-201ENST00000379516 NDUFS3O75489 264 aa15.04■□□□□ -0
SNX2-201ENST00000379516 PIGNO95427 931 aa15.04■□□□□ -0
SNX2-201ENST00000379516 HOXB8P17481 243 aaPredicted RBP15.04■□□□□ -0
SNX2-201ENST00000379516 MPSTP25325 297 aa15.04■□□□□ -0
SNX2-201ENST00000379516 PSMA3P25788 255 aa15.04■□□□□ -0
SNX2-201ENST00000379516 DDX6P26196 483 aaKnown RBP eCLIP15.04■□□□□ -0
SNX2-201ENST00000379516 GKP32189 559 aa15.04■□□□□ -0
SNX2-201ENST00000379516 MC4RP32245 332 aa15.04■□□□□ -0
SNX2-201ENST00000379516 CDKN1CP49918 316 aaPredicted RBP15.04■□□□□ -0
SNX2-201ENST00000379516 C1QTNF8P60827 252 aa15.04■□□□□ -0
SNX2-201ENST00000379516 UBE3AQ05086 875 aa15.04■□□□□ -0
SNX2-201ENST00000379516 BCL2L1Q07817 233 aa15.04■□□□□ -0
SNX2-201ENST00000379516 SLC5A9Q2M3M2 681 aa15.04■□□□□ -0
SNX2-201ENST00000379516 TTC30BQ8N4P2 665 aa15.04■□□□□ -0
SNX2-201ENST00000379516 UTP4Q969X6 686 aaKnown RBP15.04■□□□□ -0
SNX2-201ENST00000379516 FAM136AQ96C01 138 aa15.04■□□□□ -0
SNX2-201ENST00000379516 TBC1D10AQ9BXI6 508 aa15.04■□□□□ -0
SNX2-201ENST00000379516 TNKS2Q9H2K2 1166 aa15.04■□□□□ -0
SNX2-201ENST00000379516 POMKQ9H5K3 350 aa15.04■□□□□ -0
SNX2-201ENST00000379516 CAPN14A8MX76 684 aa15.04■□□□□ -0
SNX2-201ENST00000379516 GRM6O15303 877 aa15.04■□□□□ -0
SNX2-201ENST00000379516 PGLSO95336 258 aa15.04■□□□□ -0
SNX2-201ENST00000379516 WISP3O95389 354 aaPredicted RBP15.04■□□□□ -0
SNX2-201ENST00000379516 MYOGP15173 224 aa15.04■□□□□ -0
SNX2-201ENST00000379516 TFEBP19484 476 aa15.04■□□□□ -0
SNX2-201ENST00000379516 FMO4P31512 558 aa15.04■□□□□ -0
SNX2-201ENST00000379516 SLC26A3P40879 764 aa15.04■□□□□ -0
SNX2-201ENST00000379516 NTHL1P78549 312 aa15.04■□□□□ -0
SNX2-201ENST00000379516 TIAL1Q01085 375 aaKnown RBP eCLIP15.04■□□□□ -0
SNX2-201ENST00000379516 PFKPQ01813 784 aa15.04■□□□□ -0
SNX2-201ENST00000379516 PITRM1Q5JRX3 1037 aa15.04■□□□□ -0
SNX2-201ENST00000379516 RTL10Q7L3V2 364 aa15.04■□□□□ -0
SNX2-201ENST00000379516 TMEM25Q86YD3 366 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms