RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 MUC3BQ9H195 1237 aa14.89□□□□□ -0.03
PRNP-201ENST00000379440 TRPC7Q9HCX4 862 aa14.89□□□□□ -0.03
PRNP-201ENST00000379440 TMEM39AQ9NV64 488 aa14.89□□□□□ -0.03
PRNP-201ENST00000379440 TBX21Q9UL17 535 aa14.89□□□□□ -0.03
PRNP-201ENST00000379440 PCDHGC4Q9Y5F7 938 aa14.89□□□□□ -0.03
PRNP-201ENST00000379440 A0A1B0GVM2 712 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 ILVBLA1L0T0 632 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 TCAF2A6NFQ2 919 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 HDAC3O15379 428 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 INSIG1O15503 277 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 MAGEC1O60732 1142 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 MBL2P11226 248 aaPredicted RBP14.88□□□□□ -0.03
PRNP-201ENST00000379440 HNRNPLP14866 589 aaKnown RBP eCLIP14.88□□□□□ -0.03
PRNP-201ENST00000379440 FSCBQ5H9T9 825 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 TPGS2Q68CL5 300 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 CXorf57Q6NSI4 855 aaKnown RBP14.88□□□□□ -0.03
PRNP-201ENST00000379440 SCUBE1Q8IWY4 988 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 FAM136AQ96C01 138 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 UBXN10Q96LJ8 280 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 SNAP91O60641 907 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 RPP40O75818 363 aaKnown RBP14.88□□□□□ -0.03
PRNP-201ENST00000379440 KRT36O76013 467 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 PRLP01236 227 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 GNAZP19086 355 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 CR2P20023 1033 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 ATP5F1P24539 256 aaPredicted RBP14.88□□□□□ -0.03
PRNP-201ENST00000379440 KCNC1P48547 511 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 ZXDBP98169 803 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 PTPRRQ15256 657 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 SLC14A2Q15849 920 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 LSM12Q3MHD2 195 aaKnown RBP14.88□□□□□ -0.03
PRNP-201ENST00000379440 RALGPS1Q5JS13 557 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 AGAP9Q5VTM2 703 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 ENDOVQ8N8Q3 282 aaKnown RBP14.88□□□□□ -0.03
PRNP-201ENST00000379440 MDGA1Q8NFP4 955 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 BHMTQ93088 406 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 ZNF689Q96CS4 500 aaPredicted RBP14.88□□□□□ -0.03
PRNP-201ENST00000379440 PHF21BQ96EK2 531 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 TSPAN17Q96FV3 270 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 ZNF334Q9HCZ1 680 aaPredicted RBP14.88□□□□□ -0.03
PRNP-201ENST00000379440 SCUBE2Q9NQ36 999 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 SAGE1Q9NXZ1 904 aa14.88□□□□□ -0.03
PRNP-201ENST00000379440 TM7SF2O76062 418 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 CD160O95971 181 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 ITGB8P26012 769 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 RAP1GDS1P52306 607 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 COPAP53621 1224 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 SMAD3P84022 425 aaKnown RBP14.87□□□□□ -0.03
PRNP-201ENST00000379440 ARF5P84085 180 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 BTG3Q14201 252 aaPredicted RBP14.87□□□□□ -0.03
PRNP-201ENST00000379440 VEPH1Q14D04 833 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 FAM219BQ5XKK7 198 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 GALNT7Q86SF2 657 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 ULK2Q8IYT8 1036 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 ARHGAP24Q8N264 748 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 OR4L1Q8NH43 312 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 CDKN2AIPNLQ96HQ2 116 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 ZFRQ96KR1 1074 aaKnown RBP14.87□□□□□ -0.03
PRNP-201ENST00000379440 ZBED2Q9BTP6 218 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 C1orf21Q9H246 121 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 TBC1D30Q9Y2I9 924 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 A0A0U1RQS6 177 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 A8MT66 165 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 C1RP00736 705 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 MZF1P28698 734 aaPredicted RBP14.87□□□□□ -0.03
PRNP-201ENST00000379440 KPNA2P52292 529 aaKnown RBP14.87□□□□□ -0.03
PRNP-201ENST00000379440 TIAL1Q01085 375 aaKnown RBP eCLIP14.87□□□□□ -0.038e-13■■■□□ 14.7
PRNP-201ENST00000379440 PFKPQ01813 784 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 EML3Q32P44 896 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 DNAL1Q4LDG9 190 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 TXNDC8Q6A555 127 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 CHST9Q7L1S5 443 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 SETD3Q86TU7 594 aaPredicted RBP14.87□□□□□ -0.03
PRNP-201ENST00000379440 CARNMT1Q8N4J0 409 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 TRMT2BQ96GJ1 504 aaKnown RBP14.87□□□□□ -0.03
PRNP-201ENST00000379440 ALG9Q9H6U8 611 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 DCLRE1BQ9H816 532 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 NCKIPSDQ9NZQ3 722 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 HSFX1Q9UBD0 423 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 SLC7A8Q9UHI5 535 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 WDR37Q9Y2I8 494 aa14.87□□□□□ -0.03
PRNP-201ENST00000379440 TBL1XO60907 577 aa14.86□□□□□ -0.03
PRNP-201ENST00000379440 WISP3O95389 354 aaPredicted RBP14.86□□□□□ -0.03
PRNP-201ENST00000379440 F11P03951 625 aa14.86□□□□□ -0.03
PRNP-201ENST00000379440 SERPINB5P36952 375 aa14.86□□□□□ -0.03
PRNP-201ENST00000379440 KLF10Q13118 480 aa14.86□□□□□ -0.03
PRNP-201ENST00000379440 RAB33AQ14088 237 aa14.86□□□□□ -0.03
PRNP-201ENST00000379440 TMEM198Q66K66 360 aa14.86□□□□□ -0.03
PRNP-201ENST00000379440 KLC3Q6P597 504 aa14.86□□□□□ -0.03
PRNP-201ENST00000379440 FRMD7Q6ZUT3 714 aa14.86□□□□□ -0.03
PRNP-201ENST00000379440 ARL14EPQ8N8R7 260 aaPredicted RBP14.86□□□□□ -0.03
PRNP-201ENST00000379440 KDM1BQ8NB78 822 aa14.86□□□□□ -0.03
PRNP-201ENST00000379440 LPCAT1Q8NF37 534 aa14.86□□□□□ -0.03
PRNP-201ENST00000379440 OR4K2Q8NGD2 314 aa14.86□□□□□ -0.03
PRNP-201ENST00000379440 SCG3Q8WXD2 468 aaKnown RBP14.86□□□□□ -0.03
PRNP-201ENST00000379440 TDRD1Q9BXT4 1180 aaKnown RBP14.86□□□□□ -0.03
PRNP-201ENST00000379440 RETREG1Q9H6L5 497 aa14.86□□□□□ -0.03
PRNP-201ENST00000379440 CATSPERZQ9NTU4 200 aa14.86□□□□□ -0.03
PRNP-201ENST00000379440 FIS1Q9Y3D6 152 aa14.86□□□□□ -0.03
PRNP-201ENST00000379440 H0Y626 953 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms