RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 CSTF2P33240 577 aaKnown RBP eCLIP17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 UGT1A3P35503 534 aa17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 SOX5P35711 763 aa17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 CCR10P46092 362 aa17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 SCNN1BP51168 640 aa17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 UBAP2LQ14157 1087 aaKnown RBP17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 DOK6Q6PKX4 331 aa17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 TRIM72Q6ZMU5 477 aa17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 HEATR4Q86WZ0 1026 aa17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 NRROSQ86YC3 692 aa17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 LURAP1LQ8IV03 231 aa17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 CACNA2D3Q8IZS8 1091 aa17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 CCDC112Q8NEF3 446 aa17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 PDCD6IPQ8WUM4 868 aaKnown RBP17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 PTCD2Q8WV60 388 aaKnown RBP17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 SLC39A8Q9C0K1 460 aa17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 VPS16Q9H269 839 aa17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 LRRC19Q9H756 370 aa17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 SP110Q9HB58 689 aa17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 PHPT1Q9NRX4 125 aaPredicted RBP17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 SLC39A1Q9NY26 324 aa17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 TMEM9Q9P0T7 183 aa17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 B4GALT6Q9UBX8 382 aa17.8■□□□□ 0.44
PDLIM4-202ENST00000379018 EFCAB7A8K855 629 aa17.79■□□□□ 0.44
PDLIM4-202ENST00000379018 WASH4PA8MWX3 477 aa17.79■□□□□ 0.44
PDLIM4-202ENST00000379018 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.79■□□□□ 0.44
PDLIM4-202ENST00000379018 PDE2AO00408 941 aaPredicted RBP17.79■□□□□ 0.44
PDLIM4-202ENST00000379018 ZW10O43264 779 aa17.79■□□□□ 0.44
PDLIM4-202ENST00000379018 RAD1O60671 282 aa17.79■□□□□ 0.44
PDLIM4-202ENST00000379018 CALB1P05937 261 aa17.79■□□□□ 0.44
PDLIM4-202ENST00000379018 UNGP13051 313 aaPredicted RBP17.79■□□□□ 0.44
PDLIM4-202ENST00000379018 CD1CP29017 333 aa17.79■□□□□ 0.44
PDLIM4-202ENST00000379018 CSF2RBP32927 897 aa17.79■□□□□ 0.44
PDLIM4-202ENST00000379018 STAT1P42224 750 aa17.79■□□□□ 0.44
PDLIM4-202ENST00000379018 RPL7AP62424 266 aaKnown RBP17.79■□□□□ 0.44
PDLIM4-202ENST00000379018 SYCP1Q15431 976 aa17.79■□□□□ 0.44
PDLIM4-202ENST00000379018 SNAP47Q5SQN1 464 aa17.79■□□□□ 0.44
PDLIM4-202ENST00000379018 ARHGAP36Q6ZRI8 547 aa17.79■□□□□ 0.44
PDLIM4-202ENST00000379018 ZNF761Q86XN6 746 aaPredicted RBP17.79■□□□□ 0.44
PDLIM4-202ENST00000379018 C3orf20Q8ND61 904 aa17.79■□□□□ 0.44
PDLIM4-202ENST00000379018 GPBAR1Q8TDU6 330 aa17.79■□□□□ 0.44
PDLIM4-202ENST00000379018 SUFUQ9UMX1 484 aa17.79■□□□□ 0.44
PDLIM4-202ENST00000379018 FLNCQ14315 2725 aa17.79■□□□□ 0.44
PDLIM4-202ENST00000379018 CFAP69A5D8W1 941 aa17.78■□□□□ 0.44
PDLIM4-202ENST00000379018 EEF2KO00418 725 aaKnown RBP17.78■□□□□ 0.44
PDLIM4-202ENST00000379018 EPHB6O15197 1021 aa17.78■□□□□ 0.44
PDLIM4-202ENST00000379018 DAPK3O43293 454 aa17.78■□□□□ 0.44
PDLIM4-202ENST00000379018 DUX1O43812 170 aa17.78■□□□□ 0.44
PDLIM4-202ENST00000379018 TRIM23P36406 574 aa17.78■□□□□ 0.44
PDLIM4-202ENST00000379018 POLD2P49005 469 aa17.78■□□□□ 0.44
PDLIM4-202ENST00000379018 ZNF143P52747 638 aaPredicted RBP17.78■□□□□ 0.44
PDLIM4-202ENST00000379018 LIMK2P53671 638 aa17.78■□□□□ 0.44
PDLIM4-202ENST00000379018 CLEC16AQ2KHT3 1053 aa17.78■□□□□ 0.44
PDLIM4-202ENST00000379018 AFMIDQ63HM1 303 aa17.78■□□□□ 0.44
PDLIM4-202ENST00000379018 AGBL5Q8NDL9 886 aa17.78■□□□□ 0.44
PDLIM4-202ENST00000379018 OCIAD1Q9NX40 245 aa17.78■□□□□ 0.44
PDLIM4-202ENST00000379018 KCNK4Q9NYG8 393 aa17.78■□□□□ 0.44
PDLIM4-202ENST00000379018 PLEKHM1Q9Y4G2 1056 aa17.78■□□□□ 0.44
PDLIM4-202ENST00000379018 TRBV23OR9-2A0A075B6M9 112 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 SIGLEC16A6NMB1 481 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 ZNF891A8MT65 544 aaPredicted RBP17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 A8MU76 341 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 PPM1DO15297 605 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 NKX2-8O15522 239 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 FUCA1P04066 466 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 CEACAM5P06731 702 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 HOXC4P09017 264 aaPredicted RBP17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 ACTR1BP42025 376 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 NDST2P52849 883 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 ACTR1AP61163 376 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 POLR2LP62875 67 aaKnown RBP17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 CTBSQ01459 385 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 CNGA3Q16281 694 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 TCP11X2Q5H9J9 407 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 ANKS6Q68DC2 871 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 RAET1GQ6H3X3 334 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 DCUN1D2Q6PH85 259 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 ZNF438Q7Z4V0 828 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 NAGSQ8N159 534 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 C9orf43Q8TAL5 461 aaPredicted RBP17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 ECHDC3Q96DC8 303 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 RNF31Q96EP0 1072 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 CTRCQ99895 268 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 B3GNT4Q9C0J1 378 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 DHX35Q9H5Z1 703 aaKnown RBP17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 AP4E1Q9UPM8 1137 aa17.77■□□□□ 0.44
PDLIM4-202ENST00000379018 THRAP10827 490 aa17.76■□□□□ 0.43
PDLIM4-202ENST00000379018 ETV3P41162 512 aa17.76■□□□□ 0.43
PDLIM4-202ENST00000379018 CSNK1DP48730 415 aa17.76■□□□□ 0.43
PDLIM4-202ENST00000379018 GSCP56915 257 aaPredicted RBP17.76■□□□□ 0.43
PDLIM4-202ENST00000379018 JAM2P57087 298 aa17.76■□□□□ 0.43
PDLIM4-202ENST00000379018 UBE2HP62256 183 aa17.76■□□□□ 0.43
PDLIM4-202ENST00000379018 CDK3Q00526 305 aa17.76■□□□□ 0.43
PDLIM4-202ENST00000379018 CA9Q16790 459 aa17.76■□□□□ 0.43
PDLIM4-202ENST00000379018 MON1BQ7L1V2 547 aa17.76■□□□□ 0.43
PDLIM4-202ENST00000379018 PHF13Q86YI8 300 aaPredicted RBP17.76■□□□□ 0.43
PDLIM4-202ENST00000379018 UNC5BQ8IZJ1 945 aa17.76■□□□□ 0.43
PDLIM4-202ENST00000379018 OR4D9Q8NGE8 314 aa17.76■□□□□ 0.43
PDLIM4-202ENST00000379018 FNIP1Q8TF40 1166 aa17.76■□□□□ 0.43
PDLIM4-202ENST00000379018 AHCYL2Q96HN2 611 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms