RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 PPP1R16AQ96I34 528 aa14.21□□□□□ -0.14
SHROOM1-203ENST00000378679 SIGLEC10Q96LC7 697 aa14.21□□□□□ -0.14
SHROOM1-203ENST00000378679 TBC1D10AQ9BXI6 508 aa14.21□□□□□ -0.14
SHROOM1-203ENST00000378679 FETUBQ9UGM5 382 aa14.21□□□□□ -0.14
SHROOM1-203ENST00000378679 H0YGN5 161 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 TK2O00142 265 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 PEX11AO75192 247 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 IFNA8P32881 189 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 PTDSS1P48651 473 aaKnown RBP14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 ATP6V0D1P61421 351 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 MSANTD2Q6P1R3 559 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 CNSTQ6PJW8 725 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 IL27RAQ6UWB1 636 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 ARHGAP36Q6ZRI8 547 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 COLGALT2Q8IYK4 626 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 KLQ9UEF7 1012 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 NFS1Q9Y697 457 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 LY75O60449 1722 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 SLC7A4O43246 635 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 ZMPSTE24O75844 475 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 PFKMP08237 780 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 F7P08709 466 aaPredicted RBP14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 PCNAP12004 261 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 AP1S1P61966 158 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 GRAMD4Q6IC98 578 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 TMCO2Q7Z6W1 182 aaPredicted RBP14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 ADAMTSL2Q86TH1 951 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 ALYREFQ86V81 257 aaKnown RBP14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 IGDCC3Q8IVU1 814 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 RDH11Q8TC12 318 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 ADAM7Q9H2U9 754 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 PIF1Q9H611 641 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 COG4Q9H9E3 785 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 ABCB8Q9NUT2 735 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 NENFQ9UMX5 172 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 INSL5Q9Y5Q6 135 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 C2orf71A6NGG8 1288 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 SEC22BO75396 215 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 DDX5P17844 614 aaKnown RBP14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 GPR1P46091 355 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 RAP1GDS1P52306 607 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 WASHC5Q12768 1159 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 TRMT5Q32P41 509 aaKnown RBP14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 TCHHL1Q5QJ38 904 aaPredicted RBP14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 RAET1GQ6H3X3 334 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 CHST9Q7L1S5 443 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 CDYL2Q8N8U2 506 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 CNDP1Q96KN2 507 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 WDR55Q9H6Y2 383 aaPredicted RBP14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 RNPEPL1Q9HAU8 725 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 ZNF358Q9NW07 568 aa14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 MYO18AQ92614 2054 aaKnown RBP14.2□□□□□ -0.14
SHROOM1-203ENST00000378679 ILVBLA1L0T0 632 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 MGAT4DA6NG13 374 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 MRASO14807 208 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 GOT2P00505 430 aaKnown RBP14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 COL6A2P12110 1019 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 FOXN2P32314 431 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 SEMG2Q02383 582 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 ZNF460Q14592 562 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 KIAA0930Q6ICG6 404 aaPredicted RBP14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 SLC39A5Q6ZMH5 540 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 FITM2Q8N6M3 262 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 TTC9BQ8N6N2 239 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 CDRT15Q96T59 188 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 DPY30Q9C005 99 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 RREB1Q92766 1687 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 OR51F1A6NGY5 319 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 ZNF487B1APH4 448 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 C1QTNF3-AMACRE9PGA6 284 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 PSMD12O00232 456 aaPredicted RBP14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 SLC25A14O95258 325 aaPredicted RBP14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 GJB5O95377 273 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 IVDP26440 423 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 CSKP41240 450 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 IRF8Q02556 426 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 CAMK1DQ8IU85 385 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 TP53INP2Q8IXH6 220 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 ARFGAP1Q8N6T3 406 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 UBR7Q8N806 425 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 CATSPER1Q8NEC5 780 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 GPR21Q99679 349 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 FKBPLQ9UIM3 349 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 TDRKHQ9Y2W6 561 aaKnown RBP14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 NDUFAF1Q9Y375 327 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 RWDD3Q9Y3V2 267 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 INPP4BO15327 924 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 FAM189A1O60320 539 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 KDM1AO60341 852 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 ELFN1P0C7U0 828 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 ZBTB46Q86UZ6 589 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 EFCAB3Q8N7B9 438 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 OR13C4Q8NGS5 318 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 DCAKDQ8WVC6 231 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 CLCA2Q9UQC9 943 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 GLYATL1P3A0A0U1RQE8 302 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 SYNDIG1LA6NDD5 238 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 M0QZQ0 153 aa14.19□□□□□ -0.14
SHROOM1-203ENST00000378679 LBPP18428 481 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms