RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 ACTR10Q9NZ32 417 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 ZNF222Q9UK12 451 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 TTLL8A6PVC2 850 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 BCAR1P56945 870 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 DEFA6Q01524 100 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 ARHGAP36Q6ZRI8 547 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 LINC00523Q86TU6 105 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 FBXL6Q8N531 539 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 AADATQ8N5Z0 425 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 MCOLN3Q8TDD5 553 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 SLC20A1Q8WUM9 679 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 ZNF641Q96N77 438 aaPredicted RBP11.79□□□□□ -0.52
NPHP4-202ENST00000378161 NODALQ96S42 347 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 NAA50Q9GZZ1 169 aaKnown RBP11.79□□□□□ -0.52
NPHP4-202ENST00000378161 TTYH1Q9H313 450 aaPredicted RBP11.79□□□□□ -0.52
NPHP4-202ENST00000378161 KLHL11Q9NVR0 708 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 NUDT5Q9UKK9 219 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 ATF5Q9Y2D1 282 aaPredicted RBP11.79□□□□□ -0.52
NPHP4-202ENST00000378161 PRELID3BQ9Y3B1 194 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 POU1F1P28069 291 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 GTF2E2P29084 291 aaKnown RBP11.79□□□□□ -0.52
NPHP4-202ENST00000378161 DUOXA2Q1HG44 320 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 FAM76BQ5HYJ3 339 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 IKBIPQ70UQ0 350 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 SSX9Q7RTT3 188 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 ERO1BQ86YB8 467 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 CAMKK1Q8N5S9 505 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 DHX38Q92620 1227 aaKnown RBP11.79□□□□□ -0.52
NPHP4-202ENST00000378161 RIPOR3Q96MK2 946 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 SPATA9Q9BWV2 254 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 XPNPEP1Q9NQW7 623 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 ZNF99A8MXY4 864 aaPredicted RBP11.79□□□□□ -0.52
NPHP4-202ENST00000378161 ABCB7O75027 752 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 KPNA2P52292 529 aaKnown RBP11.79□□□□□ -0.52
NPHP4-202ENST00000378161 SLC12A3P55017 1021 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 GALK2Q01415 458 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 NFX1Q12986 1120 aaKnown RBP11.79□□□□□ -0.52
NPHP4-202ENST00000378161 FGL2Q14314 439 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 TPRG1LQ5T0D9 272 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 SLC9A9Q8IVB4 645 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 SLC44A2Q8IWA5 706 aaPredicted RBP11.79□□□□□ -0.52
NPHP4-202ENST00000378161 CHERPQ8IWX8 916 aaKnown RBP11.79□□□□□ -0.52
NPHP4-202ENST00000378161 LINC00518Q8N0U6 118 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 ATG16L2Q8NAA4 619 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 SLC7A14Q8TBB6 771 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 ZC3H10Q96K80 434 aaKnown RBP11.79□□□□□ -0.52
NPHP4-202ENST00000378161 KATNAL1Q9BW62 490 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 ANKEF1Q9NU02 776 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 NPAP1Q9NZP6 1156 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 PCDHA3Q9Y5H8 950 aa11.79□□□□□ -0.52
NPHP4-202ENST00000378161 ABCC6O95255 1503 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 ARHGEF33A8MVX0 844 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 ENPP3O14638 875 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 TGFB3P10600 412 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 CYP3A5P20815 502 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 GPC1P35052 558 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 IDUAP35475 653 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 ZNF45Q02386 682 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 FAM180BQ6P0A1 224 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 MIB1Q86YT6 1006 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 RDM1Q8NG50 284 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 FEZF2Q8TBJ5 459 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 METTL6Q8TCB7 284 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 CBWD1Q9BRT8 395 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 KAT8Q9H7Z6 458 aaKnown RBP11.78□□□□□ -0.52
NPHP4-202ENST00000378161 FER1L4A9Z1Z3 1794 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 ATP6AP2A0A1C7CYW4 349 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 INPP4BO15327 924 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 LEPRP48357 1165 aaKnown RBP11.78□□□□□ -0.52
NPHP4-202ENST00000378161 PPP3CCP48454 512 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 MARCKSL1P49006 195 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 IFRD2Q12894 506 aaPredicted RBP11.78□□□□□ -0.52
NPHP4-202ENST00000378161 ZNF404Q494X3 552 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 CHST15Q7LFX5 561 aaPredicted RBP11.78□□□□□ -0.52
NPHP4-202ENST00000378161 METTL4Q8N3J2 472 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 ZBTB44Q8NCP5 570 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 HAS1Q92839 578 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 FAM167AQ96KS9 214 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 PFDN5Q99471 154 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 EBF4Q9BQW3 602 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 ACSS3Q9H6R3 686 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 IL1RL2Q9HB29 575 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 MAN2B2Q9Y2E5 1009 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 ADGRA2Q96PE1 1338 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 PLSCR1O15162 318 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 OGNP20774 298 aaKnown RBP11.78□□□□□ -0.52
NPHP4-202ENST00000378161 CD247P20963 164 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 EPHA3P29320 983 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 IFITM2Q01629 132 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 NPY5RQ15761 445 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 IRF2BP2Q7Z5L9 587 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 POLNQ7Z5Q5 900 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 TRIM48Q8IWZ4 208 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 CPNE9Q8IYJ1 553 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 BANPQ8N9N5 519 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 MBOAT7Q96N66 472 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 KIFC1Q9BW19 673 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 ANKRD60Q9BZ19 345 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 SLC22A4Q9H015 551 aa11.78□□□□□ -0.52
NPHP4-202ENST00000378161 SP110Q9HB58 689 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms