RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 METTL21EPA6NDL7 271 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 ECHDC2Q86YB7 292 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 ZNF655Q8N720 491 aaPredicted RBP4.95□□□□□ -1.62
PCDH9-201ENST00000377861 ANKFN1Q8N957 763 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 NCSTNQ92542 709 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 MOAP1Q96BY2 351 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 GTSE1Q9NYZ3 720 aa4.95□□□□□ -1.62
PCDH9-201ENST00000377861 MROH2AA6NES4 1674 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 F8A1P23610 371 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 MRPS10P82664 201 aaKnown RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 LIN54Q6MZP7 749 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 KRT78Q8N1N4 520 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 SCGB3A2Q96PL1 93 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 GBA3Q9H227 469 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 TM9SF3Q9HD45 589 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 CCDC59Q9P031 241 aaKnown RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 SLITRK5O94991 958 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 TRIM49P0CI25 452 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 TRIM49CP0CI26 452 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 GLRA2P23416 452 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 UBE3AQ05086 875 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 KCNMB4Q86W47 210 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 PLPP6Q8IY26 295 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 HPS1Q92902 700 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 SLC28A2O43868 658 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 IDH3AP50213 366 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 IGKV6-21A0A0C4DH24 114 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 IFNA16P05015 189 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 C2P06681 752 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 CD53P19397 219 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 ATP5C1P36542 298 aaKnown RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 IL10RBQ08334 325 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 DUSP28Q4G0W2 176 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 MSANTD2Q6P1R3 559 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 UMODL1-AS1Q8N2C9 162 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 B4GALNT2Q8NHY0 566 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 NODALQ96S42 347 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 IGKV6D-21A0A0A0MT36 114 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 DDIASQ8IXT1 998 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 CHTF18Q8WVB6 975 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 KCTD15Q96SI1 283 aaPredicted RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 TRIM51Q9BSJ1 452 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 FAIM2Q9BWQ8 316 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 REEP1Q9H902 201 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 CCDC182A6NF36 153 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 POP4O95707 220 aaKnown RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 REXO5Q96IC2 774 aaKnown RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 ZFP57Q9NU63 452 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 PDHA1P08559 390 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 PPM1AP35813 382 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 TBC1D20Q96BZ9 403 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 ITM2CQ9NQX7 267 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 SDR39U1Q9NRG7 319 aaPredicted RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 LRCH4O75427 683 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 PIGNO95427 931 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 LTFP02788 710 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 ZNF181Q2M3W8 571 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 ZNF549Q6P9A3 640 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 KIAA1191Q96A73 305 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 PLEKHA8Q96JA3 519 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 ANKRD60Q9BZ19 345 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 SLC6A16Q9GZN6 736 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 ZBTB26Q9HCK0 441 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 F8VP50 259 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 PTPN3P26045 913 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 DYNLT1P63172 113 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 LGALS3BPQ08380 585 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 CAMK1Q14012 370 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 HSDL2Q6YN16 418 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 ADGRD2Q7Z7M1 963 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 IL17RCQ8NAC3 791 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 OIT3Q8WWZ8 545 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 SMYD3Q9H7B4 428 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 PCDHB16Q9NRJ7 776 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 WDR70Q9NW82 654 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 SH3BP4Q9P0V3 963 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 DNMT3LQ9UJW3 386 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 NR2F6P10588 404 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 S100A3P33764 101 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 HAVCR1Q96D42 359 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 TRIM10Q9UDY6 481 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 ILVBLA1L0T0 632 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 MRASO14807 208 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 CNSTQ6PJW8 725 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 EPS8L3Q8TE67 593 aaKnown RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 SNX18Q96RF0 628 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 PDE10AQ9Y233 779 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 PXDNQ92626 1479 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 TRAPPC2P0DI81 140 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 TRAPPC2BP0DI82 140 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 CD72P21854 359 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 GAS6Q14393 721 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 N4BP2L1Q5TBK1 243 aaPredicted RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 RIPOR1Q6ZS17 1223 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 DERL2Q9GZP9 239 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 EMC3Q9P0I2 261 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 SLCO3A1Q9UIG8 710 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 LRFN2Q9ULH4 789 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 AURKCQ9UQB9 309 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 TLR6Q9Y2C9 796 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms