RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 PDE2AO00408 941 aaPredicted RBP16.83■□□□□ 0.28
HMGN4-201ENST00000377575 GCATO75600 419 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 JCHAINP01591 159 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 TRBC1P01850 177 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 PDHA1P08559 390 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 CTPS1P17812 591 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 TRIM23P36406 574 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 CDKN2BP42772 138 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 NR2C2P49116 596 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 RPIAP49247 311 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 C1orf61Q13536 156 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 NR0B2Q15466 257 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 C6orf132Q5T0Z8 1188 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 PNCKQ6P2M8 343 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 MFSD7Q6UXD7 560 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 RD3Q7Z3Z2 195 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 HSD11B1LQ7Z5J1 315 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 DAAM2Q86T65 1068 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 TSPAN33Q86UF1 283 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 GAS2L3Q86XJ1 694 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 GKN2Q86XP6 184 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 KATNAL2Q8IYT4 538 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 PDCD7Q8N8D1 485 aaKnown RBP16.83■□□□□ 0.28
HMGN4-201ENST00000377575 OR56A4Q8NGH8 313 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 ARRDC2Q8TBH0 407 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 IFI44Q8TCB0 444 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 TSACCQ96A04 125 aaPredicted RBP16.83■□□□□ 0.28
HMGN4-201ENST00000377575 FUBP1Q96AE4 644 aaKnown RBP16.83■□□□□ 0.28
HMGN4-201ENST00000377575 BOCQ9BWV1 1114 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 PCDH9Q9HC56 1237 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 PHPT1Q9NRX4 125 aaPredicted RBP16.83■□□□□ 0.28
HMGN4-201ENST00000377575 CLCA2Q9UQC9 943 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 CHKBQ9Y259 395 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 DGKBQ9Y6T7 804 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 U3KQA8 63 aa16.83■□□□□ 0.28
HMGN4-201ENST00000377575 KNTC1P50748 2209 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 GOLGA6CA6NDK9 693 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 GOLGA6BA6NDN3 693 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 CAPN8A6NHC0 703 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 TNFRSF10CO14798 259 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 TNFP01375 233 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 GOLGA6DP0CG33 693 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 MYCLP1P12525 358 aaPredicted RBP16.82■□□□□ 0.28
HMGN4-201ENST00000377575 TGM2P21980 687 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 ETV3P41162 512 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 CD86P42081 329 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 INSM1Q01101 510 aaPredicted RBP16.82■□□□□ 0.28
HMGN4-201ENST00000377575 NIPAL4Q0D2K0 466 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 ZBTB17Q13105 803 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 TAZQ16635 292 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 TFDP3Q5H9I0 405 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 LRRC66Q68CR7 880 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 LVRNQ6Q4G3 990 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 NPNTQ6UXI9 565 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 SPOCD1Q6ZMY3 1216 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 MARCH9Q86YJ5 346 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 CCDC50Q8IVM0 306 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 CACTIN-AS1Q8N1I8 211 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 LPCAT1Q8NF37 534 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 NXPE2Q96DL1 559 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 PDXPQ96GD0 296 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 RBM41Q96IZ5 413 aaKnown RBP16.82■□□□□ 0.28
HMGN4-201ENST00000377575 CLPBQ9H078 707 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 GOLPH3Q9H4A6 298 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 GOLGA6AQ9NYA3 693 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 SEPT10Q9P0V9 454 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 TFR2Q9UP52 801 aa16.82■□□□□ 0.28
HMGN4-201ENST00000377575 YY2O15391 372 aa16.81■□□□□ 0.28
HMGN4-201ENST00000377575 ZRANB2O95218 330 aaKnown RBP eCLIP16.81■□□□□ 0.28
HMGN4-201ENST00000377575 TEAD1P28347 426 aa16.81■□□□□ 0.28
HMGN4-201ENST00000377575 CLDN6P56747 220 aa16.81■□□□□ 0.28
HMGN4-201ENST00000377575 CAMK2BQ13554 666 aa16.81■□□□□ 0.28
HMGN4-201ENST00000377575 CDKN3Q16667 212 aa16.81■□□□□ 0.28
HMGN4-201ENST00000377575 KAZNQ674X7 775 aa16.81■□□□□ 0.28
HMGN4-201ENST00000377575 RAET1GQ6H3X3 334 aa16.81■□□□□ 0.28
HMGN4-201ENST00000377575 HEATR4Q86WZ0 1026 aa16.81■□□□□ 0.28
HMGN4-201ENST00000377575 PROSER1Q86XN7 944 aa16.81■□□□□ 0.28
HMGN4-201ENST00000377575 RCOR2Q8IZ40 523 aa16.81■□□□□ 0.28
HMGN4-201ENST00000377575 CBARPQ8N350 705 aaPredicted RBP16.81■□□□□ 0.28
HMGN4-201ENST00000377575 NAT6Q93015 286 aa16.81■□□□□ 0.28
HMGN4-201ENST00000377575 RBM15Q96T37 977 aaKnown RBP eCLIP16.81■□□□□ 0.28
HMGN4-201ENST00000377575 ADGRE3Q9BY15 652 aa16.81■□□□□ 0.28
HMGN4-201ENST00000377575 ABCG4Q9H172 646 aa16.81■□□□□ 0.28
HMGN4-201ENST00000377575 FGF22Q9HCT0 170 aa16.81■□□□□ 0.28
HMGN4-201ENST00000377575 DKK4Q9UBT3 224 aa16.81■□□□□ 0.28
HMGN4-201ENST00000377575 DMXL2Q8TDJ6 3036 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 TRABD2BA6NFA1 517 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 TMEM202A6NGA9 273 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 BTNL10A8MVZ5 291 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 OPA1O60313 960 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 CST8O60676 142 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 PYGLP06737 847 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 CELA2BP08218 269 aaPredicted RBP16.8■□□□□ 0.28
HMGN4-201ENST00000377575 MYF5P13349 255 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 CDC25BP30305 580 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 NAP1L1P55209 391 aaKnown RBP16.8■□□□□ 0.28
HMGN4-201ENST00000377575 SKOR1P84550 965 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 CDK3Q00526 305 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 DPTQ07507 201 aa16.8■□□□□ 0.28
HMGN4-201ENST00000377575 TARDBPQ13148 414 aaKnown RBP eCLIP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms