RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 ZNF30P17039 623 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 NFKBIAP25963 317 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 HMGCLP35914 325 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 CCDC15Q0P6D6 951 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 MAP7D1Q3KQU3 841 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 UBAP2Q5T6F2 1119 aaKnown RBP21.31■■□□□ 1
CBWD3-202ENST00000377342 CASC4Q6P4E1 433 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 MICALCLQ6ZW33 695 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 HSD11B1LQ7Z5J1 315 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 CBARPQ8N350 705 aaPredicted RBP21.31■■□□□ 1
CBWD3-202ENST00000377342 FAM160A2Q8N612 972 aaPredicted RBP21.31■■□□□ 1
CBWD3-202ENST00000377342 AENQ8WTP8 325 aaKnown RBP21.31■■□□□ 1
CBWD3-202ENST00000377342 PTCD2Q8WV60 388 aaKnown RBP21.31■■□□□ 1
CBWD3-202ENST00000377342 EBNA1BP2Q99848 306 aaKnown RBP21.31■■□□□ 1
CBWD3-202ENST00000377342 TXLNGYQ9BZA5 131 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 GPR63Q9BZJ6 419 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 MRM3Q9HC36 420 aaKnown RBP21.31■■□□□ 1
CBWD3-202ENST00000377342 SLC2A6Q9UGQ3 507 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 MAD1L1Q9Y6D9 718 aa21.31■■□□□ 1
CBWD3-202ENST00000377342 LAMTOR5O43504 91 aa21.3■■□□□ 1
CBWD3-202ENST00000377342 TSPAN6O43657 245 aa21.3■■□□□ 1
CBWD3-202ENST00000377342 CRTAMO95727 393 aa21.3■■□□□ 1
CBWD3-202ENST00000377342 ELFN1P0C7U0 828 aa21.3■■□□□ 1
CBWD3-202ENST00000377342 LIG3P49916 1009 aa21.3■■□□□ 1
CBWD3-202ENST00000377342 SFSWAPQ12872 951 aaKnown RBP21.3■■□□□ 1
CBWD3-202ENST00000377342 RFLNAQ6ZTI6 216 aa21.3■■□□□ 1
CBWD3-202ENST00000377342 RELL1Q8IUW5 271 aa21.3■■□□□ 1
CBWD3-202ENST00000377342 FBXO36Q8NEA4 188 aa21.3■■□□□ 1
CBWD3-202ENST00000377342 OR13C4Q8NGS5 318 aa21.3■■□□□ 1
CBWD3-202ENST00000377342 OR13J1Q8NGT2 312 aa21.3■■□□□ 1
CBWD3-202ENST00000377342 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.3■■□□□ 1
CBWD3-202ENST00000377342 DNAJC1Q96KC8 554 aaKnown RBP21.3■■□□□ 1
CBWD3-202ENST00000377342 TREX1Q9NSU2 369 aa21.3■■□□□ 1
CBWD3-202ENST00000377342 IL17CQ9P0M4 197 aa21.3■■□□□ 1
CBWD3-202ENST00000377342 ZFR2Q9UPR6 939 aaKnown RBP21.3■■□□□ 1
CBWD3-202ENST00000377342 PLXNB3Q9ULL4 1909 aa21.3■■□□□ 1
CBWD3-202ENST00000377342 NEMP1O14524 444 aa21.29■■□□□ 1
CBWD3-202ENST00000377342 AXIN1O15169 862 aa21.29■■□□□ 1
CBWD3-202ENST00000377342 ZNF217O75362 1048 aa21.29■■□□□ 1
CBWD3-202ENST00000377342 C6P13671 934 aa21.29■■□□□ 1
CBWD3-202ENST00000377342 MCM3P25205 808 aa21.29■■□□□ 1
CBWD3-202ENST00000377342 PSMA3P25788 255 aa21.29■■□□□ 1
CBWD3-202ENST00000377342 NMBRP28336 390 aa21.29■■□□□ 1
CBWD3-202ENST00000377342 AVPR2P30518 371 aa21.29■■□□□ 1
CBWD3-202ENST00000377342 PPP2CBP62714 309 aa21.29■■□□□ 1
CBWD3-202ENST00000377342 PPP2CAP67775 309 aa21.29■■□□□ 1
CBWD3-202ENST00000377342 ARHGEF7Q14155 803 aa21.29■■□□□ 1
CBWD3-202ENST00000377342 TSTD2Q5T7W7 516 aa21.29■■□□□ 1
CBWD3-202ENST00000377342 ARMC3Q5W041 872 aa21.29■■□□□ 1
CBWD3-202ENST00000377342 SEL1L3Q68CR1 1132 aa21.29■■□□□ 1
CBWD3-202ENST00000377342 CES3Q6UWW8 571 aa21.29■■□□□ 1
CBWD3-202ENST00000377342 MFSD3Q96ES6 412 aa21.29■■□□□ 1
CBWD3-202ENST00000377342 FCRL3Q96P31 734 aaPredicted RBP21.29■■□□□ 1
CBWD3-202ENST00000377342 BTBD1Q9H0C5 482 aa21.29■■□□□ 1
CBWD3-202ENST00000377342 SGK2Q9HBY8 427 aa21.29■■□□□ 1
CBWD3-202ENST00000377342 PREBQ9HCU5 417 aa21.29■■□□□ 1
CBWD3-202ENST00000377342 WSB2Q9NYS7 404 aaPredicted RBP21.29■■□□□ 1
CBWD3-202ENST00000377342 SAMD15Q9P1V8 674 aa21.29■■□□□ 1
CBWD3-202ENST00000377342 COQ6Q9Y2Z9 468 aa21.29■■□□□ 1
CBWD3-202ENST00000377342 FAM237BA0A1B0GVD1 139 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 CCL22O00626 93 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 MMP20O60882 483 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 PGAM1P18669 254 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 LPOP22079 712 aaPredicted RBP21.28■■□□□ 1
CBWD3-202ENST00000377342 MAGEA4P43358 317 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 ACVR1Q04771 509 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 TMEM259Q4ZIN3 620 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 TMEM135Q86UB9 458 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 OR4K2Q8NGD2 314 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 TOE1Q96GM8 510 aaKnown RBP21.28■■□□□ 1
CBWD3-202ENST00000377342 C9orf72Q96LT7 481 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 COQ10AQ96MF6 247 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 PRR23AA6NEV1 266 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 C2orf81A6NN90 581 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 PSMD11O00231 422 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 PCDH8O95206 1070 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 SEMA4FO95754 770 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 TUBBP07437 444 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 CD6P30203 668 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 ARSDP51689 593 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 CRYMQ14894 314 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 STEAP4Q687X5 459 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 ESRP1Q6NXG1 681 aaKnown RBP21.28■■□□□ 1
CBWD3-202ENST00000377342 UNC5AQ6ZN44 842 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 CXorf40AQ8TE69 158 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 ZNF669Q96BR6 464 aaPredicted RBP21.28■■□□□ 1
CBWD3-202ENST00000377342 TSPYL1Q9H0U9 437 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 CDC42EP4Q9H3Q1 356 aaKnown RBP21.28■■□□□ 1
CBWD3-202ENST00000377342 KDM4CQ9H3R0 1056 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 BPIFA1Q9NP55 256 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 ZC3H7BQ9UGR2 993 aaKnown RBP21.28■■□□□ 1
CBWD3-202ENST00000377342 RIMKLBQ9ULI2 386 aa21.28■■□□□ 1
CBWD3-202ENST00000377342 CCDC163A0A0D9SF12 145 aa21.27■■□□□ 1
CBWD3-202ENST00000377342 ZCWPW2A0A1B0GU75 182 aa21.27■■□□□ 1
CBWD3-202ENST00000377342 FAM47DPA6NHR8 397 aa21.27■■□□□ 1
CBWD3-202ENST00000377342 BPIP17213 487 aa21.27■■□□□ 1
CBWD3-202ENST00000377342 ARNTP27540 789 aa21.27■■□□□ 1
CBWD3-202ENST00000377342 ETV3P41162 512 aa21.27■■□□□ 1
CBWD3-202ENST00000377342 FNTBP49356 437 aa21.27■■□□□ 1
CBWD3-202ENST00000377342 CREB5Q02930 508 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms