RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 IGSF6O95976 241 aa13.19□□□□□ -0.3
CLCN6-205ENST00000376492 PTMAP06454 111 aaKnown RBP13.19□□□□□ -0.3
CLCN6-205ENST00000376492 CCL4P13236 92 aa13.19□□□□□ -0.3
CLCN6-205ENST00000376492 GLB1P16278 677 aa13.19□□□□□ -0.3
CLCN6-205ENST00000376492 DESP17661 470 aa13.19□□□□□ -0.3
CLCN6-205ENST00000376492 XPAP23025 273 aaPredicted RBP13.19□□□□□ -0.3
CLCN6-205ENST00000376492 RHOAP61586 193 aa13.19□□□□□ -0.3
CLCN6-205ENST00000376492 TSR1Q2NL82 804 aaKnown RBP13.19□□□□□ -0.3
CLCN6-205ENST00000376492 ASTE1Q2TB18 679 aaPredicted RBP13.19□□□□□ -0.3
CLCN6-205ENST00000376492 ALKBH5Q6P6C2 394 aaKnown RBP13.19□□□□□ -0.3
CLCN6-205ENST00000376492 TAF8Q7Z7C8 310 aa13.19□□□□□ -0.3
CLCN6-205ENST00000376492 LRRC8AQ8IWT6 810 aa13.19□□□□□ -0.3
CLCN6-205ENST00000376492 FAM46DQ8NEK8 389 aa13.19□□□□□ -0.3
CLCN6-205ENST00000376492 OR6C4Q8NGE1 309 aa13.19□□□□□ -0.3
CLCN6-205ENST00000376492 CCL4L1Q8NHW4 92 aa13.19□□□□□ -0.3
CLCN6-205ENST00000376492 FUBP1Q96AE4 644 aaKnown RBP13.19□□□□□ -0.3
CLCN6-205ENST00000376492 TBC1D31Q96DN5 1066 aa13.19□□□□□ -0.3
CLCN6-205ENST00000376492 EPN3Q9H201 632 aa13.19□□□□□ -0.3
CLCN6-205ENST00000376492 RDH14Q9HBH5 336 aa13.19□□□□□ -0.3
CLCN6-205ENST00000376492 PCDH12Q9NPG4 1184 aa13.19□□□□□ -0.3
CLCN6-205ENST00000376492 ZNHIT6Q9NWK9 470 aaKnown RBP13.19□□□□□ -0.3
CLCN6-205ENST00000376492 LRIT1Q9P2V4 623 aa13.19□□□□□ -0.3
CLCN6-205ENST00000376492 LHX3Q9UBR4 397 aa13.19□□□□□ -0.3
CLCN6-205ENST00000376492 FZD10Q9ULW2 581 aa13.19□□□□□ -0.3
CLCN6-205ENST00000376492 MFHAS1Q9Y4C4 1052 aa13.19□□□□□ -0.3
CLCN6-205ENST00000376492 SCN8AQ9UQD0 1980 aa13.19□□□□□ -0.3
CLCN6-205ENST00000376492 LRP4O75096 1905 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 MFAP3LO75121 409 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 TNFP01375 233 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 CYP1A2P05177 515 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 PSMA2P25787 234 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 LIG3P49916 1009 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 ARSDP51689 593 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 RAD51Q06609 339 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 HLTFQ14527 1009 aaKnown RBP eCLIP13.18□□□□□ -0.3
CLCN6-205ENST00000376492 SKIDA1Q1XH10 827 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 MAP9Q49MG5 647 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 C14orf28Q4W4Y0 310 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 CCDC122Q5T0U0 273 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 SCYL2Q6P3W7 929 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 OGFOD3Q6PK18 319 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 ZSWIM9Q86XI8 627 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 ARFGAP1Q8N6T3 406 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 RCBTB1Q8NDN9 531 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 TMEM159Q96B96 161 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 HMCESQ96FZ2 354 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 NCAPGQ9BPX3 1015 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 TRIM7Q9C029 511 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 TMEM168Q9H0V1 697 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 THAP2Q9H0W7 228 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 ABHD10Q9NUJ1 306 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 MYO1AQ9UBC5 1043 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 DGKBQ9Y6T7 804 aa13.18□□□□□ -0.3
CLCN6-205ENST00000376492 TSPAN11A1L157 253 aa13.17□□□□□ -0.3
CLCN6-205ENST00000376492 RNF8O76064 485 aa13.17□□□□□ -0.3
CLCN6-205ENST00000376492 MMP12P39900 470 aa13.17□□□□□ -0.3
CLCN6-205ENST00000376492 MAZP56270 477 aaKnown RBP13.17□□□□□ -0.3
CLCN6-205ENST00000376492 OR1D5P58170 312 aa13.17□□□□□ -0.3
CLCN6-205ENST00000376492 B4GALNT1Q00973 533 aa13.17□□□□□ -0.3
CLCN6-205ENST00000376492 ELP6Q0PNE2 266 aa13.17□□□□□ -0.3
CLCN6-205ENST00000376492 MTM1Q13496 603 aa13.17□□□□□ -0.3
CLCN6-205ENST00000376492 ARHGEF7Q14155 803 aa13.17□□□□□ -0.3
CLCN6-205ENST00000376492 CYTH1Q15438 398 aa13.17□□□□□ -0.3
CLCN6-205ENST00000376492 SLC18A3Q16572 532 aa13.17□□□□□ -0.3
CLCN6-205ENST00000376492 UGP2Q16851 508 aa13.17□□□□□ -0.3
CLCN6-205ENST00000376492 AMZ1Q400G9 498 aa13.17□□□□□ -0.3
CLCN6-205ENST00000376492 EFHC2Q5JST6 749 aa13.17□□□□□ -0.3
CLCN6-205ENST00000376492 PYROXD2Q8N2H3 581 aa13.17□□□□□ -0.3
CLCN6-205ENST00000376492 TC2NQ8N9U0 490 aa13.17□□□□□ -0.3
CLCN6-205ENST00000376492 OR56A4Q8NGH8 313 aa13.17□□□□□ -0.3
CLCN6-205ENST00000376492 ATL2Q8NHH9 583 aa13.17□□□□□ -0.3
CLCN6-205ENST00000376492 ZNF564Q8TBZ8 553 aaPredicted RBP13.17□□□□□ -0.3
CLCN6-205ENST00000376492 NUDT22Q9BRQ3 303 aa13.17□□□□□ -0.3
CLCN6-205ENST00000376492 SLC12A9Q9BXP2 914 aa13.17□□□□□ -0.3
CLCN6-205ENST00000376492 DPEP2Q9H4A9 486 aa13.17□□□□□ -0.3
CLCN6-205ENST00000376492 ZSCAN5CA6NGD5 496 aaPredicted RBP13.16□□□□□ -0.3
CLCN6-205ENST00000376492 EIF3CLB5ME19 914 aaKnown RBP13.16□□□□□ -0.3
CLCN6-205ENST00000376492 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.16□□□□□ -0.3
CLCN6-205ENST00000376492 STMND1H3BQB6 276 aa13.16□□□□□ -0.3
CLCN6-205ENST00000376492 B4GAT1O43505 415 aa13.16□□□□□ -0.3
CLCN6-205ENST00000376492 NUDT21O43809 227 aaKnown RBP13.16□□□□□ -0.3
CLCN6-205ENST00000376492 BUB1BO60566 1050 aaPredicted RBP13.16□□□□□ -0.3
CLCN6-205ENST00000376492 PNLIPP16233 465 aa13.16□□□□□ -0.3
CLCN6-205ENST00000376492 CD82P27701 267 aa13.16□□□□□ -0.3
CLCN6-205ENST00000376492 PCK1P35558 622 aa13.16□□□□□ -0.3
CLCN6-205ENST00000376492 POLE2P56282 527 aa13.16□□□□□ -0.3
CLCN6-205ENST00000376492 KIAA1024LP59773 190 aa13.16□□□□□ -0.3
CLCN6-205ENST00000376492 KCNAB2Q13303 367 aa13.16□□□□□ -0.3
CLCN6-205ENST00000376492 UBAP2LQ14157 1087 aaKnown RBP13.16□□□□□ -0.3
CLCN6-205ENST00000376492 IGFBP7Q16270 282 aa13.16□□□□□ -0.3
CLCN6-205ENST00000376492 INO80DQ53TQ3 878 aaPredicted RBP13.16□□□□□ -0.3
CLCN6-205ENST00000376492 ERMARDQ5T6L9 678 aa13.16□□□□□ -0.3
CLCN6-205ENST00000376492 BORAQ6PGQ7 559 aa13.16□□□□□ -0.3
CLCN6-205ENST00000376492 TMTC1Q8IUR5 882 aa13.16□□□□□ -0.3
CLCN6-205ENST00000376492 PSTKQ8IV42 348 aaKnown RBP13.16□□□□□ -0.3
CLCN6-205ENST00000376492 PELI3Q8N2H9 469 aa13.16□□□□□ -0.3
CLCN6-205ENST00000376492 RTL3Q8N8U3 475 aaKnown RBP13.16□□□□□ -0.3
CLCN6-205ENST00000376492 SPC24Q8NBT2 197 aa13.16□□□□□ -0.3
CLCN6-205ENST00000376492 CASKIN2Q8WXE0 1202 aa13.16□□□□□ -0.3
CLCN6-205ENST00000376492 EIF3CQ99613 913 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms