RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 OR52B2Q96RD2 323 aa14.02□□□□□ -0.16
MSH5-202ENST00000375740 MRPL9Q9BYD2 267 aaKnown RBP14.02□□□□□ -0.16
MSH5-202ENST00000375740 SUDS3Q9H7L9 328 aaPredicted RBP14.02□□□□□ -0.16
MSH5-202ENST00000375740 ZDHHC2Q9UIJ5 367 aa14.02□□□□□ -0.16
MSH5-202ENST00000375740 A0A0D9SEW6 157 aa14.02□□□□□ -0.17
MSH5-202ENST00000375740 GOLGA8QA0A0J9YX86 632 aa14.02□□□□□ -0.17
MSH5-202ENST00000375740 LOC100653049A0A140TA62 436 aa14.02□□□□□ -0.17
MSH5-202ENST00000375740 GOLGA8OA6NCC3 632 aa14.02□□□□□ -0.17
MSH5-202ENST00000375740 GOLGA8NF8WBI6 632 aa14.02□□□□□ -0.17
MSH5-202ENST00000375740 DCXO43602 365 aa14.02□□□□□ -0.17
MSH5-202ENST00000375740 ZBTB14O43829 449 aa14.02□□□□□ -0.17
MSH5-202ENST00000375740 KRT34O76011 436 aa14.02□□□□□ -0.17
MSH5-202ENST00000375740 MYCP01106 439 aaPredicted RBP14.02□□□□□ -0.17
MSH5-202ENST00000375740 TFEBP19484 476 aa14.02□□□□□ -0.17
MSH5-202ENST00000375740 ATP5C1P36542 298 aaKnown RBP14.02□□□□□ -0.17
MSH5-202ENST00000375740 SH3BGRP55822 239 aaPredicted RBP14.02□□□□□ -0.17
MSH5-202ENST00000375740 CYLC2Q14093 348 aaPredicted RBP14.02□□□□□ -0.17
MSH5-202ENST00000375740 CSHL1Q14406 222 aa14.02□□□□□ -0.17
MSH5-202ENST00000375740 SCN5AQ14524 2016 aa14.02□□□□□ -0.17
MSH5-202ENST00000375740 RNF135Q8IUD6 432 aa14.02□□□□□ -0.17
MSH5-202ENST00000375740 PPP1R36Q96LQ0 422 aa14.02□□□□□ -0.17
MSH5-202ENST00000375740 TTLL2Q9BWV7 592 aa14.02□□□□□ -0.17
MSH5-202ENST00000375740 POLR1EQ9GZS1 481 aaKnown RBP14.02□□□□□ -0.17
MSH5-202ENST00000375740 MRPL46Q9H2W6 279 aaKnown RBP14.02□□□□□ -0.17
MSH5-202ENST00000375740 WDR55Q9H6Y2 383 aaPredicted RBP14.02□□□□□ -0.17
MSH5-202ENST00000375740 IGSF5Q9NSI5 407 aa14.02□□□□□ -0.17
MSH5-202ENST00000375740 ACTL7AQ9Y615 435 aa14.02□□□□□ -0.17
MSH5-202ENST00000375740 OR51F1A6NGY5 319 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 H3BNX3 289 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 PITPNM1O00562 1244 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 SLC7A4O43246 635 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 GRID2O43424 1007 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 LDB2O43679 373 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 AP1G1O43747 822 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 ACSL4O60488 711 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 GJB5O95377 273 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 OR1D2P34982 312 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 COPAP53621 1224 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 CCL23P55773 120 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 CCNYL1Q8N7R7 359 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 ZBTB8BQ8NAP8 495 aaPredicted RBP14.01□□□□□ -0.17
MSH5-202ENST00000375740 MRPL57Q9BQC6 102 aaKnown RBP14.01□□□□□ -0.17
MSH5-202ENST00000375740 INIPQ9NRY2 104 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 NDUFA13Q9P0J0 144 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 DNMT3LQ9UJW3 386 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 HDAC3O15379 428 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 PQBP1O60828 265 aaKnown RBP14.01□□□□□ -0.17
MSH5-202ENST00000375740 DNAJA2O60884 412 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 ZMPSTE24O75844 475 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 PRKAA1Q13131 559 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 ZNF235Q14590 738 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 FSCBQ5H9T9 825 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 METTL21CQ5VZV1 264 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 SEL1L3Q68CR1 1132 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 CILP2Q8IUL8 1156 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 ICA1LQ8NDH6 482 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 OR7D4Q8NG98 312 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 OR52K2Q8NGK3 314 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 GABPB2Q8TAK5 448 aaPredicted RBP14.01□□□□□ -0.17
MSH5-202ENST00000375740 CMTM5Q96DZ9 223 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 ZNF512Q96ME7 567 aaPredicted RBP14.01□□□□□ -0.17
MSH5-202ENST00000375740 NACA2Q9H009 215 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 PDFQ9HBH1 243 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 TCF7L2Q9NQB0 619 aa14.01□□□□□ -0.17
MSH5-202ENST00000375740 ZFP37Q9Y6Q3 630 aaPredicted RBP14.01□□□□□ -0.17
MSH5-202ENST00000375740 NEMP1O14524 444 aa14□□□□□ -0.17
MSH5-202ENST00000375740 S1PR4O95977 384 aa14□□□□□ -0.17
MSH5-202ENST00000375740 GLDCP23378 1020 aa14□□□□□ -0.17
MSH5-202ENST00000375740 CLCN5P51795 746 aa14□□□□□ -0.17
MSH5-202ENST00000375740 PRAMEP78395 509 aa14□□□□□ -0.17
MSH5-202ENST00000375740 MYBPC1Q00872 1141 aa14□□□□□ -0.17
MSH5-202ENST00000375740 DCTN2Q13561 401 aaKnown RBP14□□□□□ -0.17
MSH5-202ENST00000375740 PTPRCAPQ14761 206 aa14□□□□□ -0.17
MSH5-202ENST00000375740 C5orf22Q49AR2 442 aa14□□□□□ -0.17
MSH5-202ENST00000375740 HECTD2Q5U5R9 776 aa14□□□□□ -0.17
MSH5-202ENST00000375740 LZICQ8WZA0 190 aa14□□□□□ -0.17
MSH5-202ENST00000375740 CNBD2Q96M20 576 aa14□□□□□ -0.17
MSH5-202ENST00000375740 PRPF18Q99633 342 aaKnown RBP14□□□□□ -0.17
MSH5-202ENST00000375740 MFSD1Q9H3U5 465 aa14□□□□□ -0.17
MSH5-202ENST00000375740 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14□□□□□ -0.17
MSH5-202ENST00000375740 MARCH4Q9P2E8 410 aaPredicted RBP14□□□□□ -0.17
MSH5-202ENST00000375740 POMPQ9Y244 141 aa14□□□□□ -0.17
MSH5-202ENST00000375740 VWA7Q9Y334 891 aa14□□□□□ -0.17
MSH5-202ENST00000375740 NEMP2A6NFY4 417 aa14□□□□□ -0.17
MSH5-202ENST00000375740 KLF10Q13118 480 aa14□□□□□ -0.17
MSH5-202ENST00000375740 GALNT3Q14435 633 aa14□□□□□ -0.17
MSH5-202ENST00000375740 SLC8B1Q6J4K2 584 aa14□□□□□ -0.17
MSH5-202ENST00000375740 TXNDC5Q8NBS9 432 aaKnown RBP14□□□□□ -0.17
MSH5-202ENST00000375740 BLOC1S5Q8TDH9 187 aa14□□□□□ -0.17
MSH5-202ENST00000375740 DIS3LQ8TF46 1054 aaKnown RBP14□□□□□ -0.17
MSH5-202ENST00000375740 TBATAQ96M53 351 aa14□□□□□ -0.17
MSH5-202ENST00000375740 SPON2Q9BUD6 331 aa14□□□□□ -0.17
MSH5-202ENST00000375740 NUF2Q9BZD4 464 aa14□□□□□ -0.17
MSH5-202ENST00000375740 UNC93B1Q9H1C4 597 aa14□□□□□ -0.17
MSH5-202ENST00000375740 ZNF840PA6NDX5 716 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 EPHA3P29320 983 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 TUFMP49411 452 aaKnown RBP13.99□□□□□ -0.17
MSH5-202ENST00000375740 ALDH7A1P49419 539 aaKnown RBP13.99□□□□□ -0.17
MSH5-202ENST00000375740 RPS24P62847 133 aaKnown RBP13.99□□□□□ -0.17
MSH5-202ENST00000375740 GNA12Q03113 381 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms