RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 CMTM8Q8IZV2 173 aa18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 SLC7A6OSQ96CW6 309 aaPredicted RBP18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PTCD3Q96EY7 689 aaKnown RBP18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 NMUR2Q9GZQ4 415 aa18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ABCB8Q9NUT2 735 aa18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PNPOQ9NVS9 261 aa18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 RPL26L1Q9UNX3 145 aaKnown RBP18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 SORCS3Q9UPU3 1222 aa18.02■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CBX6O95503 412 aa18.01■□□□□ 0.47
HLA-DQB1-201ENST00000374943 SERPINA6P08185 405 aa18.01■□□□□ 0.47
HLA-DQB1-201ENST00000374943 RBP1P09455 135 aa18.01■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PFKPQ01813 784 aa18.01■□□□□ 0.47
HLA-DQB1-201ENST00000374943 RCN2Q14257 317 aa18.01■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ACAP2Q15057 778 aa18.01■□□□□ 0.47
HLA-DQB1-201ENST00000374943 TBCCQ15814 346 aa18.01■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ATXN7L2Q5T6C5 722 aaPredicted RBP18.01■□□□□ 0.47
HLA-DQB1-201ENST00000374943 KLC3Q6P597 504 aa18.01■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ZNF549Q6P9A3 640 aa18.01■□□□□ 0.47
HLA-DQB1-201ENST00000374943 MAVSQ7Z434 540 aa18.01■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PACS2Q86VP3 889 aa18.01■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PDCD6IPQ8WUM4 868 aaKnown RBP18.01■□□□□ 0.47
HLA-DQB1-201ENST00000374943 STON2Q8WXE9 905 aa18.01■□□□□ 0.47
HLA-DQB1-201ENST00000374943 BHMTQ93088 406 aa18.01■□□□□ 0.47
HLA-DQB1-201ENST00000374943 C19orf43Q9BQ61 176 aa18.01■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CDH19Q9H159 772 aa18.01■□□□□ 0.47
HLA-DQB1-201ENST00000374943 MTIF3Q9H2K0 278 aaKnown RBP18.01■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CLEC4EQ9ULY5 219 aa18.01■□□□□ 0.47
HLA-DQB1-201ENST00000374943 TRIM33Q9UPN9 1127 aa18.01■□□□□ 0.47
HLA-DQB1-201ENST00000374943 SOCS5O75159 536 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 RFPL2O75678 378 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PGLSO95336 258 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 RB1P06400 928 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 POU2F2P09086 479 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ATP5F1P24539 256 aaPredicted RBP18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CD70P32970 193 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 SERPINB5P36952 375 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CSHL1Q14406 222 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 TEAD2Q15562 447 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ARMC12Q5T9G4 340 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 TPGS1Q6ZTW0 290 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 TTC7BQ86TV6 843 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 C7orf61Q8IZ16 206 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CCDC126Q96EE4 140 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 TCEAL4Q96EI5 215 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 MYO19Q96H55 970 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PRR11Q96HE9 360 aaPredicted RBP18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 NSL1Q96IY1 281 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 RAB3IPQ96QF0 476 aaPredicted RBP18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 EBF4Q9BQW3 602 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 C17orf80Q9BSJ5 609 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 AARSD1Q9BTE6 412 aaKnown RBP18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 SMG9Q9H0W8 520 aaKnown RBP18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 MAGEE1Q9HCI5 957 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ARL8BQ9NVJ2 186 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 POLR3BQ9NW08 1133 aaPredicted RBP18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ZMYM5Q9UJ78 669 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 INTS6Q9UL03 887 aaKnown RBP18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CCL26Q9Y258 94 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 VPS9D1Q9Y2B5 631 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 RAP2CQ9Y3L5 183 aa18■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CAPN14A8MX76 684 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 K7ERQ8 282 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 HTRA2O43464 458 aaPredicted RBP17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 MGRN1O60291 552 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 NPHS1O60500 1241 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PENKP01210 267 aaPredicted RBP17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 RHOP08100 348 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CCDC166P0CW27 439 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 TCF3P15923 654 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CALB2P22676 271 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PMLP29590 882 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 SLC8A1P32418 973 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 TIAL1Q01085 375 aaKnown RBP eCLIP17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CAMK1Q14012 370 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 KIF2BQ8N4N8 673 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ZNF781Q8N8C0 355 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PNPLA1Q8N8W4 532 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 TTC16Q8NEE8 873 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 LPGAT1Q92604 370 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ILKAPQ9H0C8 392 aaPredicted RBP17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 KLC4Q9NSK0 619 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PLK2Q9NYY3 685 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CRYL1Q9Y2S2 319 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 MYO7AQ13402 2215 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 SMAD6O43541 496 aaKnown RBP17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 CLASP2O75122 1294 aaKnown RBP17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 XYLBO75191 536 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 IGSF6O95976 241 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 KRT16P08779 473 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PTPN4P29074 926 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ABL2P42684 1182 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 IDH3AP50213 366 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PRKAA1Q13131 559 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PRSS36Q5K4E3 855 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 TMEM207Q6UWW9 146 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 PIWIL4Q7Z3Z4 852 aaKnown RBP17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 SPATA6LQ8N4H0 392 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ZNF557Q8N988 423 aaPredicted RBP17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 RIN3Q8TB24 985 aa17.99■□□□□ 0.47
HLA-DQB1-201ENST00000374943 ANKRD49Q8WVL7 239 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms