RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 AHI1Q8N157 1196 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 CRISPLD1Q9H336 500 aa12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 WBP11Q9Y2W2 641 aaKnown RBP12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 TDRKHQ9Y2W6 561 aaKnown RBP12.31□□□□□ -0.44
NPLOC4-202ENST00000374747 DHX15O43143 795 aaKnown RBP12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 NADKO95544 446 aaPredicted RBP12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 PRKAR1AP10644 381 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 BCL2L1Q07817 233 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 ARMC12Q5T9G4 340 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 CYP20A1Q6UW02 462 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 PROSER1Q86XN7 944 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 EBNA1BP2Q99848 306 aaKnown RBP12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 ING3Q9NXR8 418 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 ANGPT4Q9Y264 503 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 SH3GLB1Q9Y371 365 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 IRS2Q9Y4H2 1338 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 EPHA3P29320 983 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 PRMT2P55345 433 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 SMIM11AP58511 58 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 CREMQ03060 361 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 KCNA10Q16322 511 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 AKIRIN2Q53H80 203 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 LGI2Q8N0V4 545 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 GSTCDQ8NEC7 633 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 ADCY4Q8NFM4 1077 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 S100A13Q99584 98 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 RTKNQ9BST9 563 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 TMEM138Q9NPI0 162 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 MARCH2Q9P0N8 246 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 PSMD13Q9UNM6 376 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 COL2A1P02458 1487 aaPredicted RBP12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 COL16A1Q07092 1604 aaPredicted RBP12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 SH3BGRLO75368 114 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 BANF1O75531 89 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 CYP2A6P11509 494 aaPredicted RBP12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 CYP3A5P20815 502 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 ABATP80404 500 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 HGSNATQ68CP4 663 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 PHF10Q8WUB8 498 aaKnown RBP12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 KCTD4Q8WVF5 259 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 RNF157Q96PX1 679 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 DUSP16Q9BY84 665 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 NLNQ9BYT8 704 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 CDH19Q9H159 772 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 TRMT13Q9NUP7 481 aaKnown RBP12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 R3HDM2Q9Y2K5 976 aaKnown RBP12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 RGS20O76081 388 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 C22orf31O95567 290 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 CATP04040 527 aaKnown RBP12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 PRG2P13727 222 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 MARCKSL1P49006 195 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 CDK9P50750 372 aaKnown RBP12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 BBS12Q6ZW61 710 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 FAM47BQ8NA70 645 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 MAGEC3Q8TD91 643 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 MRPL17Q9NRX2 175 aaKnown RBP12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 FSCN2O14926 492 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 XYLBO75191 536 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 NFKB1P19838 968 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 TGFBR2P37173 567 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 CCL23P55773 120 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 CYP4F2P78329 520 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 CYP4F3Q08477 520 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 FCHO2Q0JRZ9 810 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 SPIDRQ14159 915 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 QPCTQ16769 361 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 KLHL24Q6TFL4 600 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 DLK2Q6UY11 383 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 IFNL1Q8IU54 200 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 SIX5Q8N196 739 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 SMYD1Q8NB12 490 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 FAM13CQ8NE31 585 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 NELL1Q92832 810 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 SSR3Q9UNL2 185 aa12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 SAMHD1Q9Y3Z3 626 aaKnown RBP12.3□□□□□ -0.44
NPLOC4-202ENST00000374747 PLCH1Q4KWH8 1693 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 ALOX15BO15296 676 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 SGTAO43765 313 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 ULK1O75385 1050 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 RAB25P57735 213 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 POU5F1Q01860 360 aaKnown RBP12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 LPIN1Q14693 890 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 C5orf22Q49AR2 442 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 LCLAT1Q6UWP7 414 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 CD99L2Q8TCZ2 262 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 HPS1Q92902 700 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 DEFB118Q96PH6 123 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 MRPL45Q9BRJ2 306 aaKnown RBP12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 FZD8Q9H461 694 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 SMCHD1A6NHR9 2005 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 PRR5-ARHGAP8B1AHC4 643 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 GPR25O00155 361 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 CILPO75339 1184 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 CKBP12277 381 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 ATP5C1P36542 298 aaKnown RBP12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 ARHGAP8P85298 464 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 TRIM32Q13049 653 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 PPP1R26Q5T8A7 1209 aaPredicted RBP12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 FAM220AQ7Z4H9 259 aa12.29□□□□□ -0.44
NPLOC4-202ENST00000374747 ZBTB46Q86UZ6 589 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms