RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 C11orf84Q9BUA3 381 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 POMKQ9H5K3 350 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 CDHR5Q9HBB8 845 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 ZNHIT2Q9UHR6 403 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 A0A0U1RQJ8 604 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 CHADO15335 359 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 NFATC1O95644 943 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 GOT1P17174 413 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 AMD1P17707 334 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 ALDH9A1P49189 494 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 ITGA1P56199 1179 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 PSME3P61289 254 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 CYP2A13Q16696 494 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 TYW3Q6IPR3 259 aaKnown RBP13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 FNDC5Q8NAU1 212 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 DGCR14Q96DF8 476 aaKnown RBP13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 LHX5Q9H2C1 402 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 RIBC2Q9H4K1 309 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 CLUHO75153 1309 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 MUSKO15146 869 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 PKNOX1P55347 436 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 SKP1P63208 163 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 PPP1R15BQ5SWA1 713 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 LYPLAL1Q5VWZ2 237 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 DET1Q7L5Y6 550 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 ELMO1Q92556 727 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 SCLYQ96I15 445 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 TMPRSS4Q9NRS4 437 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 CCDC167Q9P0B6 97 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 ANAPC2Q9UJX6 822 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 FAM237BA0A1B0GVD1 139 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 RGS10O43665 173 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 FESP07332 822 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 MYBL2P10244 700 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 KLHL24Q6TFL4 600 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 AMIGO3Q86WK7 504 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 OR56A4Q8NGH8 313 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 PIWIL2Q8TC59 973 aaKnown RBP13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 UBASH3BQ8TF42 649 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 AGO1Q9UL18 857 aaKnown RBP13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 CRYL1Q9Y2S2 319 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 PIPSLA2A3N6 862 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 GDI2P50395 445 aaKnown RBP13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 NEK3P51956 506 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 CRY1Q16526 586 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 SLC25A52Q3SY17 297 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 DBF4BQ8NFT6 615 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 FCRL2Q96LA5 508 aaPredicted RBP13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 KLHL32Q96NJ5 620 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 SEMA3CQ99985 751 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 KIFC1Q9BW19 673 aa13.35□□□□□ -0.27
RAPGEF1-201ENST00000372189 ABLIM1O14639 778 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 PAGE1O75459 146 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 PTPN2P17706 415 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 NFKB1P19838 968 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 NRF1Q16656 503 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 ZNF655Q8N720 491 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 TPP1O14773 563 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 TMEM127O75204 238 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 CYP1A1P04798 512 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 GSTM1P09488 218 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 CCND3P30281 292 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 AFTPHQ6ULP2 937 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 CASP12Q6UXS9 341 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 PPP1R14AQ96A00 147 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 BTN2A3PQ96KV6 586 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 SAE1Q9UBE0 346 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 A0A1W2PQ72 361 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 PTGES3LE9PB15 166 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 ANXA6P08133 673 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 CCDC166P0CW27 439 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 SLC9A3P48764 834 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 ZNF45Q02386 682 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 TLE2Q04725 743 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 USP39Q53GS9 565 aaKnown RBP13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 CTU1Q7Z7A3 348 aaKnown RBP13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 FBXW8Q8N3Y1 598 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 OR52K1Q8NGK4 314 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 CXorf40BQ96DE9 158 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 ACBD6Q9BR61 282 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 FAM126AQ9BYI3 521 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 GTF2IRD1Q9UHL9 959 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 CILPO75339 1184 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 C22orf31O95567 290 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 XIAPP98170 497 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 AAGABQ6PD74 315 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 FAM124AQ86V42 546 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 FAM126BQ8IXS8 530 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 TRPC4APQ8TEL6 797 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 EZH1Q92800 747 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 CCDC74BQ96LY2 380 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 CCDC115Q96NT0 180 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 KLHL1Q9NR64 748 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 DEC1Q9P2X7 70 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 A0A088AWK7 358 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 KPNA5O15131 536 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 NDUFB5O43674 189 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 ENTPD5O75356 428 aa13.34□□□□□ -0.27
RAPGEF1-201ENST00000372189 C4BPAP04003 597 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms