RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 TMEM114B3SHH9 223 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 RHOBTB1O94844 696 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 GJB5O95377 273 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 MBL2P11226 248 aaPredicted RBP17.11■□□□□ 0.33
VEGFA-205ENST00000372067 ARSDP51689 593 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 CDH13P55290 713 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 VEPH1Q14D04 833 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 KIAA0930Q6ICG6 404 aaPredicted RBP17.11■□□□□ 0.33
VEGFA-205ENST00000372067 MRNIPQ6NTE8 343 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 RSPO2Q6UXX9 243 aaPredicted RBP17.11■□□□□ 0.33
VEGFA-205ENST00000372067 RANBP10Q6VN20 620 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 NPAS4Q8IUM7 802 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 SLC7A5P1Q8MH63 180 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 SNX31Q8N9S9 440 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 LENG8Q96PV6 779 aaPredicted RBP17.11■□□□□ 0.33
VEGFA-205ENST00000372067 BPIFA1Q9NP55 256 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 PTTG2Q9NZH5 202 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 VWA7Q9Y334 891 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 HEMK1Q9Y5R4 338 aaPredicted RBP17.11■□□□□ 0.33
VEGFA-205ENST00000372067 H0Y626 953 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 ADAM12O43184 909 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 TMEM169Q96HH4 297 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 RNF208Q9H0X6 261 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 NOL6Q9H6R4 1146 aaKnown RBP17.1■□□□□ 0.33
VEGFA-205ENST00000372067 TLE6Q9H808 572 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 SCUBE2Q9NQ36 999 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 SLC7A8Q9UHI5 535 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 ATP6AP2A0A1C7CYW4 349 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 ATP6AP2O75787 350 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 GSRP00390 522 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 IL1BP01584 269 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 GALTP07902 379 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 LTA4HP09960 611 aaKnown RBP17.1■□□□□ 0.33
VEGFA-205ENST00000372067 ZNF33AQ06730 810 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 GPR17Q13304 367 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 RPS6KA2Q15349 733 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 ZRANB3Q5FWF4 1079 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 FAM26DQ5JW98 314 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 HECTD3Q5T447 861 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 IZUMO2Q6UXV1 221 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 TMCO2Q7Z6W1 182 aaPredicted RBP17.1■□□□□ 0.33
VEGFA-205ENST00000372067 CCDC117Q8IWD4 279 aaPredicted RBP17.1■□□□□ 0.33
VEGFA-205ENST00000372067 UMODL1-AS1Q8N2C9 162 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 HIPK3Q9H422 1215 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 VPS45Q9NRW7 570 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 TM7SF2O76062 418 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 FMO4P31512 558 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 PKNOX1P55347 436 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 POU4F1Q01851 419 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 ARHGEF6Q15052 776 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 TRMT5Q32P41 509 aaKnown RBP17.1■□□□□ 0.33
VEGFA-205ENST00000372067 GRAMD1BQ3KR37 738 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 LSM12Q3MHD2 195 aaKnown RBP17.1■□□□□ 0.33
VEGFA-205ENST00000372067 MAVSQ7Z434 540 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 DDIASQ8IXT1 998 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 TMEM248Q9NWD8 314 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 PCDHGC4Q9Y5F7 938 aa17.1■□□□□ 0.33
VEGFA-205ENST00000372067 DYTNA2CJ06 578 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 HOXA2O43364 376 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 PGM3O95394 542 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 ATP5F1P24539 256 aaPredicted RBP17.09■□□□□ 0.33
VEGFA-205ENST00000372067 PFKPQ01813 784 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 KIF19Q2TAC6 998 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 PPM1LQ5SGD2 360 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 BEND5Q7L4P6 421 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 SCML4Q8N228 414 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.09■□□□□ 0.337e-8■■□□□ 11.5
VEGFA-205ENST00000372067 CEP70Q8NHQ1 597 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 AUTS2Q8WXX7 1259 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 IMP4Q96G21 291 aaKnown RBP17.09■□□□□ 0.33
VEGFA-205ENST00000372067 C1orf74Q96LT6 269 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 MRPL57Q9BQC6 102 aaKnown RBP17.09■□□□□ 0.33
VEGFA-205ENST00000372067 SQORQ9Y6N5 450 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 A0A087X1B8 175 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 TYW5A2RUC4 315 aaKnown RBP17.09■□□□□ 0.33
VEGFA-205ENST00000372067 SUPT3HB4E1H0 165 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 FBP2O00757 339 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 ACSL4O60488 711 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 GLDCP23378 1020 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 CORO1AP31146 461 aaKnown RBP17.09■□□□□ 0.33
VEGFA-205ENST00000372067 HPS6Q86YV9 775 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 MRPL9Q9BYD2 267 aaKnown RBP17.09■□□□□ 0.33
VEGFA-205ENST00000372067 EBF3Q9H4W6 596 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 PRDM5Q9NQX1 630 aaPredicted RBP17.09■□□□□ 0.33
VEGFA-205ENST00000372067 MARCH4Q9P2E8 410 aaPredicted RBP17.09■□□□□ 0.33
VEGFA-205ENST00000372067 DOLKQ9UPQ8 538 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 PIK3R1P27986 724 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 CLCN5P51795 746 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 GNA12Q03113 381 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 RELAQ04206 551 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 IL10RBQ08334 325 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 CYLC2Q14093 348 aaPredicted RBP17.09■□□□□ 0.33
VEGFA-205ENST00000372067 CENPLQ8N0S6 344 aaPredicted RBP17.09■□□□□ 0.33
VEGFA-205ENST00000372067 TPK1Q9H3S4 243 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 STX18Q9P2W9 335 aaKnown RBP17.09■□□□□ 0.33
VEGFA-205ENST00000372067 SORCS3Q9UPU3 1222 aa17.09■□□□□ 0.33
VEGFA-205ENST00000372067 CAPN14A8MX76 684 aa17.08■□□□□ 0.33
VEGFA-205ENST00000372067 GIPC1O14908 333 aa17.08■□□□□ 0.33
VEGFA-205ENST00000372067 SRP72O76094 671 aaKnown RBP17.08■□□□□ 0.33
VEGFA-205ENST00000372067 GOT2P00505 430 aaKnown RBP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms