RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 SSX6Q7RTT6 188 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 APTXQ7Z2E3 356 aaKnown RBP15.28■□□□□ 0.04
COL5A1-201ENST00000371817 TRMT11Q7Z4G4 463 aaKnown RBP15.28■□□□□ 0.04
COL5A1-201ENST00000371817 CENPNQ96H22 339 aaPredicted RBP15.28■□□□□ 0.04
COL5A1-201ENST00000371817 FUCA2Q9BTY2 467 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 ZCCHC2Q9C0B9 1178 aaKnown RBP15.28■□□□□ 0.04
COL5A1-201ENST00000371817 ALDH4A1P30038 563 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 PRDX5P30044 214 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 SLC6A4P31645 630 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 TXNL4AP83876 142 aaKnown RBP15.28■□□□□ 0.04
COL5A1-201ENST00000371817 FAM131BQ86XD5 332 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 DNAAF5Q86Y56 855 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 TLR8Q9NR97 1041 aaKnown RBP15.28■□□□□ 0.04
COL5A1-201ENST00000371817 SLC33A1O00400 549 aaPredicted RBP15.28■□□□□ 0.04
COL5A1-201ENST00000371817 PGLSO95336 258 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 ITGB1P05556 798 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 SRCP12931 536 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 GABRB2P47870 512 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 GRHL2Q6ISB3 625 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 ANKEF1Q9NU02 776 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 ARL8BQ9NVJ2 186 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 PDE2AO00408 941 aaPredicted RBP15.28■□□□□ 0.04
COL5A1-201ENST00000371817 GPIP06744 558 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 ZNHIT3Q15649 155 aaPredicted RBP15.28■□□□□ 0.04
COL5A1-201ENST00000371817 KATNAL2Q8IYT4 538 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 TNS4Q8IZW8 715 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 PGAM4Q8N0Y7 254 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 ZFP28Q8NHY6 868 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 SPON1Q9HCB6 807 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 FAM105AQ9NUU6 356 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 INO80Q9ULG1 1556 aaPredicted RBP15.27■□□□□ 0.04
COL5A1-201ENST00000371817 TPH1P17752 444 aa15.27■□□□□ 0.04
COL5A1-201ENST00000371817 MLLT6P55198 1093 aaPredicted RBP15.27■□□□□ 0.04
COL5A1-201ENST00000371817 MYL6P60660 151 aa15.27■□□□□ 0.04
COL5A1-201ENST00000371817 FRRS1Q6ZNA5 592 aa15.27■□□□□ 0.04
COL5A1-201ENST00000371817 CERS2Q96G23 380 aa15.27■□□□□ 0.04
COL5A1-201ENST00000371817 ACE2Q9BYF1 805 aaPredicted RBP15.27■□□□□ 0.04
COL5A1-201ENST00000371817 FADS2P1A8MWK0 482 aa15.27■□□□□ 0.04
COL5A1-201ENST00000371817 SLC28A1O00337 649 aa15.27■□□□□ 0.04
COL5A1-201ENST00000371817 NARSO43776 548 aaKnown RBP15.27■□□□□ 0.04
COL5A1-201ENST00000371817 PEX11AO75192 247 aa15.27■□□□□ 0.04
COL5A1-201ENST00000371817 PTPN20Q4JDL3 420 aa15.27■□□□□ 0.04
COL5A1-201ENST00000371817 CBWD6Q4V339 395 aa15.27■□□□□ 0.04
COL5A1-201ENST00000371817 ANO7Q6IWH7 933 aa15.27■□□□□ 0.04
COL5A1-201ENST00000371817 GPR65Q8IYL9 337 aa15.27■□□□□ 0.04
COL5A1-201ENST00000371817 LRRIQ1Q96JM4 1722 aa15.27■□□□□ 0.04
COL5A1-201ENST00000371817 CYP27B1O15528 508 aa15.27■□□□□ 0.04
COL5A1-201ENST00000371817 ACSL1P33121 698 aa15.27■□□□□ 0.04
COL5A1-201ENST00000371817 FAM98CQ17RN3 349 aaKnown RBP15.27■□□□□ 0.04
COL5A1-201ENST00000371817 LDHDQ86WU2 507 aa15.27■□□□□ 0.04
COL5A1-201ENST00000371817 CHERPQ8IWX8 916 aaKnown RBP15.27■□□□□ 0.04
COL5A1-201ENST00000371817 FAM98AQ8NCA5 519 aaKnown RBP15.27■□□□□ 0.04
COL5A1-201ENST00000371817 THAP6Q8TBB0 222 aa15.27■□□□□ 0.04
COL5A1-201ENST00000371817 TSEN15Q8WW01 171 aaKnown RBP15.27■□□□□ 0.04
COL5A1-201ENST00000371817 PCDH18Q9HCL0 1135 aa15.27■□□□□ 0.04
COL5A1-201ENST00000371817 FGFR1P11362 822 aa15.27■□□□□ 0.04
COL5A1-201ENST00000371817 HSD3B1P14060 373 aa15.27■□□□□ 0.04
COL5A1-201ENST00000371817 ATP13A4Q4VNC1 1196 aa15.27■□□□□ 0.04
COL5A1-201ENST00000371817 ACOT1Q86TX2 421 aa15.27■□□□□ 0.04
COL5A1-201ENST00000371817 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.27■□□□□ 0.04
COL5A1-201ENST00000371817 MTRRQ9UBK8 725 aa15.27■□□□□ 0.04
COL5A1-201ENST00000371817 BTBD19C9JJ37 291 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 TULP3O75386 442 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 ASLP04424 464 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 CHKAP35790 457 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 BMT2Q1RMZ1 405 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 SLC4A11Q8NBS3 891 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 UFD1Q92890 307 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 MECRQ9BV79 373 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 A0A0J9YYE9 177 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 EDF1O60869 148 aaKnown RBP15.27■□□□□ 0.03
COL5A1-201ENST00000371817 TSHRP16473 764 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 PRKAG1P54619 331 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 IER5Q5VY09 327 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 GPRIN3Q6ZVF9 776 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 ATG9AQ7Z3C6 839 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 CNPPD1Q9BV87 410 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 HIPK3Q9H422 1215 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 SAV1Q9H4B6 383 aaPredicted RBP15.27■□□□□ 0.03
COL5A1-201ENST00000371817 CISHQ9NSE2 258 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 PTPN3P26045 913 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 FMO4P31512 558 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 ADAM15Q13444 863 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 SPPL2CQ8IUH8 684 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 SVOPLQ8N434 492 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 RANBP3Q9H6Z4 567 aaPredicted RBP15.27■□□□□ 0.03
COL5A1-201ENST00000371817 CD320Q9NPF0 282 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 PLK2Q9NYY3 685 aa15.27■□□□□ 0.03
COL5A1-201ENST00000371817 SPTLC1O15269 473 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 MSH4O15457 936 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 OR1I1O60431 355 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 CCNB1P14635 433 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 CLIP4Q8N3C7 705 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 CEP295NLQ96MC4 621 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 TBCBQ99426 244 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 CDADC1Q9BWV3 514 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 RC3H2Q9HBD1 1191 aaKnown RBP15.26■□□□□ 0.03
COL5A1-201ENST00000371817 HEG1Q9ULI3 1381 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 SSX4O60224 188 aa15.26■□□□□ 0.03
COL5A1-201ENST00000371817 CHST15Q7LFX5 561 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms