RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 MOSPD1Q9UJG1 213 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 PLEKHM1Q9Y4G2 1056 aa13.18□□□□□ -0.3
RPF1-201ENST00000370654 PRSS38A1L453 326 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 NPIPB15A6NHN6 443 aaPredicted RBP13.17□□□□□ -0.3
RPF1-201ENST00000370654 H3BRJ5 948 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 PYCARD-AS1I3L0S3 204 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 K7ENP7 123 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 B4GAT1O43505 415 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 HEXIM1O94992 359 aaKnown RBP13.17□□□□□ -0.3
RPF1-201ENST00000370654 MBD3O95983 291 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 CEACAM5P06731 702 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 ITGA2BP08514 1039 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 PDHA1P08559 390 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 HOXC4P09017 264 aaPredicted RBP13.17□□□□□ -0.3
RPF1-201ENST00000370654 DESP17661 470 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 CTPS1P17812 591 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 AK4P27144 223 aaPredicted RBP13.17□□□□□ -0.3
RPF1-201ENST00000370654 VIPR1P32241 457 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 INHBCP55103 352 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 B4GALNT1Q00973 533 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 SLC25A11Q02978 314 aaKnown RBP13.17□□□□□ -0.3
RPF1-201ENST00000370654 ZFP36L1Q07352 338 aaKnown RBP13.17□□□□□ -0.3
RPF1-201ENST00000370654 ZSCAN23Q3MJ62 389 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 ATP13A4Q4VNC1 1196 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 C14orf28Q4W4Y0 310 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 SPECC1LQ69YQ0 1117 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 PPP1R2P3Q6NXS1 205 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 INO80CQ6PI98 192 aaPredicted RBP13.17□□□□□ -0.3
RPF1-201ENST00000370654 Q6ZVL8 140 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 SPRED1Q7Z699 444 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 HEATR4Q86WZ0 1026 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 ARL14Q8N4G2 192 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 PAF1Q8N7H5 531 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 WDR48Q8TAF3 677 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 PATE1Q8WXA2 126 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 NUS1Q96E22 293 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 NUDCD1Q96RS6 583 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 MGME1Q9BQP7 344 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 SEMA6CQ9H3T2 930 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 DPEP2Q9H4A9 486 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 WDR26Q9H7D7 661 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 DONSONQ9NYP3 566 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 LRIT1Q9P2V4 623 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 PISDQ9UG56 409 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 APPL1Q9UKG1 709 aa13.17□□□□□ -0.3
RPF1-201ENST00000370654 CFAP46Q8IYW2 2715 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 HELZ2Q9BYK8 2649 aaKnown RBP13.16□□□□□ -0.3
RPF1-201ENST00000370654 TNFRSF10CO14798 259 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 MAP3K6O95382 1288 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 SOD1P00441 154 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 CPP00450 1065 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 FGF1P05230 155 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 GLB1P16278 677 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 CCKBRP32239 447 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 ZNF165P49910 485 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 RENBPP51606 427 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 UCNP55089 124 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 OR1D5P58170 312 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 POLR2LP62875 67 aaKnown RBP13.16□□□□□ -0.3
RPF1-201ENST00000370654 RHDQ02161 417 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 ZNF235Q14590 738 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 CAVIN1Q6NZI2 390 aaKnown RBP13.16□□□□□ -0.3
RPF1-201ENST00000370654 TMCO3Q6UWJ1 677 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 ATL2Q8NHH9 583 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 GPBAR1Q8TDU6 330 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 PIH1D2Q8WWB5 315 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 SPOCK2Q92563 424 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 DTD2Q96FN9 168 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 ZNF599Q96NL3 588 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 TEX101Q9BY14 249 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 FRMD8Q9BZ67 464 aaPredicted RBP13.16□□□□□ -0.3
RPF1-201ENST00000370654 CARS2Q9HA77 564 aaKnown RBP13.16□□□□□ -0.3
RPF1-201ENST00000370654 RDH14Q9HBH5 336 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 FOXJ2Q9P0K8 574 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 CD84Q9UIB8 345 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 LOXL2Q9Y4K0 774 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 SCINQ9Y6U3 715 aa13.16□□□□□ -0.3
RPF1-201ENST00000370654 PRAMEF33A0A0G2JMD5 474 aa13.15□□□□□ -0.3
RPF1-201ENST00000370654 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.15□□□□□ -0.3
RPF1-201ENST00000370654 SMTNL1A8MU46 457 aa13.15□□□□□ -0.3
RPF1-201ENST00000370654 GOLGA6L22H0YM25 854 aa13.15□□□□□ -0.3
RPF1-201ENST00000370654 PRAMEF10O60809 474 aa13.15□□□□□ -0.3
RPF1-201ENST00000370654 PGLSO95336 258 aa13.15□□□□□ -0.3
RPF1-201ENST00000370654 MYCLP1P12525 358 aaPredicted RBP13.15□□□□□ -0.3
RPF1-201ENST00000370654 WT1P19544 449 aaPredicted RBP13.15□□□□□ -0.3
RPF1-201ENST00000370654 PBX1P40424 430 aa13.15□□□□□ -0.3
RPF1-201ENST00000370654 GNPDA1P46926 289 aa13.15□□□□□ -0.3
RPF1-201ENST00000370654 ARSEP51690 589 aa13.15□□□□□ -0.3
RPF1-201ENST00000370654 CDK3Q00526 305 aa13.15□□□□□ -0.3
RPF1-201ENST00000370654 FILIP1LQ4L180 1135 aa13.15□□□□□ -0.3
RPF1-201ENST00000370654 BOLA3Q53S33 107 aa13.15□□□□□ -0.3
RPF1-201ENST00000370654 ZNF574Q6ZN55 896 aaPredicted RBP13.15□□□□□ -0.3
RPF1-201ENST00000370654 TECPR1Q7Z6L1 1165 aa13.15□□□□□ -0.3
RPF1-201ENST00000370654 TRIM74Q86UV6 250 aa13.15□□□□□ -0.3
RPF1-201ENST00000370654 C17orf82Q86X59 251 aaPredicted RBP13.15□□□□□ -0.3
RPF1-201ENST00000370654 JAMLQ86YT9 394 aa13.15□□□□□ -0.3
RPF1-201ENST00000370654 SLITRK4Q8IW52 837 aa13.15□□□□□ -0.3
RPF1-201ENST00000370654 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.15□□□□□ -0.3
RPF1-201ENST00000370654 LZTR1Q8N653 840 aa13.15□□□□□ -0.3
RPF1-201ENST00000370654 PMEPA1Q969W9 287 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms