RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ZNF197O14709 1029 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 OPHN1O60890 802 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 ALX3O95076 343 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 CBX6O95503 412 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 IL4RP24394 825 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 VIPR2P41587 438 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 EIF2B2P49770 351 aaKnown RBP6.91□□□□□ -1.3
CSDE1-204ENST00000369530 HADHBP55084 474 aaKnown RBP6.91□□□□□ -1.3
CSDE1-204ENST00000369530 NR1H3Q13133 447 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 KRT81Q14533 505 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 HSF5Q4G112 596 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-204ENST00000369530 SGO2Q562F6 1265 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 MDH1BQ5I0G3 518 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 TMEM31Q5JXX7 168 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 PPM1LQ5SGD2 360 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 TMTC4Q5T4D3 741 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 NANOGP8Q6NSW7 305 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 RAPH1Q70E73 1250 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 SYT13Q7L8C5 426 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 NOP9Q86U38 636 aaKnown RBP6.91□□□□□ -1.3
CSDE1-204ENST00000369530 GALNT13Q8IUC8 556 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 EXD1Q8NHP7 514 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 WFDC5Q8TCV5 224 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 JADE3Q92613 823 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 FAF2Q96CS3 445 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 HSFY1Q96LI6 401 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 C1orf74Q96LT6 269 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 PSKH2Q96QS6 385 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 PANX3Q96QZ0 392 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 OSGEPQ9NPF4 335 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 ANKMY1Q9P2S6 941 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 ZFP69BQ9UJL9 534 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 CNOT11Q9UKZ1 510 aaKnown RBP6.91□□□□□ -1.3
CSDE1-204ENST00000369530 PHTF1Q9UMS5 762 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 FAM50BQ9Y247 325 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 CAPN14A8MX76 684 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 SGTAO43765 313 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 ERBB2P04626 1255 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 ALOX5P09917 674 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 SRGAP2BP0DMP2 458 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 POLR2CP19387 275 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-204ENST00000369530 GJA4P35212 333 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 WDR4P57081 412 aaKnown RBP6.91□□□□□ -1.3
CSDE1-204ENST00000369530 IRX4P78413 519 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 MYBPC1Q00872 1141 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 IL9RQ01113 521 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 MOGQ16653 247 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 DCAF6Q58WW2 860 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 FRA10AC1Q70Z53 315 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 ENOSF1Q7L5Y1 443 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 ARID3BQ8IVW6 561 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-204ENST00000369530 NIPA2Q8N8Q9 360 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 CEP70Q8NHQ1 597 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 ZNF420Q8TAQ5 688 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-204ENST00000369530 SUN5Q8TC36 379 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 SLC2A14Q8TDB8 520 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 CCDC138Q96M89 665 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 CDH19Q9H159 772 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 CCSER2Q9H7U1 834 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 C10orf88Q9H8K7 445 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 PARD6AQ9NPB6 346 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 THG1LQ9NWX6 298 aaKnown RBP6.91□□□□□ -1.3
CSDE1-204ENST00000369530 APOBEC2Q9Y235 224 aaKnown RBP6.91□□□□□ -1.3
CSDE1-204ENST00000369530 VPS13CQ709C8 3753 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 M0QX08 132 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 BMP10O95393 424 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 ESRRAP11474 423 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-204ENST00000369530 ARSAP15289 507 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 MMP8P22894 467 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 AMPD1P23109 780 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 CYP4F8P98187 520 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 FOLH1Q04609 750 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 DLG1Q12959 904 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 ZNF211Q13398 564 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-204ENST00000369530 ANO4Q32M45 955 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 AGAP9Q5VTM2 703 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 DENND1BQ6P3S1 775 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 TMEM270Q6UE05 265 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 PRR23CQ6ZRP0 262 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 PIP4P1Q86T03 277 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 HEATR4Q86WZ0 1026 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 DCP2Q8IU60 420 aaKnown RBP6.91□□□□□ -1.3
CSDE1-204ENST00000369530 TMPRSS6Q8IU80 811 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 RBM15BQ8NDT2 890 aaKnown RBP6.91□□□□□ -1.3
CSDE1-204ENST00000369530 TBC1D15Q8TC07 691 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 CALML6Q8TD86 181 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 RASSF5Q8WWW0 418 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 GIMAP5Q96F15 307 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 PRRX2Q99811 253 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 AGPAT1Q99943 283 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 IGFLR1Q9H665 355 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 C8orf33Q9H7E9 229 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-204ENST00000369530 CNGB3Q9NQW8 809 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 PCDHGA2Q9Y5H1 932 aa6.91□□□□□ -1.3
CSDE1-204ENST00000369530 MYO7AQ13402 2215 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 IQANK1A0A1B0GTG1 560 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 KRIT1O00522 736 aa6.9□□□□□ -1.3
CSDE1-204ENST00000369530 CCNT2O60583 730 aaKnown RBP6.9□□□□□ -1.3
CSDE1-204ENST00000369530 THRAP10827 490 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms