RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 LIG4P49917 911 aa10.03□□□□□ -0.8
SCNM1-202ENST00000368905 POLGP54098 1239 aaPredicted RBP10.03□□□□□ -0.8
SCNM1-202ENST00000368905 MAMLD1Q13495 774 aa10.03□□□□□ -0.8
SCNM1-202ENST00000368905 GAS6Q14393 721 aa10.03□□□□□ -0.8
SCNM1-202ENST00000368905 PARP6Q2NL67 630 aa10.03□□□□□ -0.8
SCNM1-202ENST00000368905 PABPC1LQ4VXU2 614 aaKnown RBP10.03□□□□□ -0.8
SCNM1-202ENST00000368905 ANKRD20A3Q5VUR7 823 aa10.03□□□□□ -0.8
SCNM1-202ENST00000368905 ARHGAP17Q68EM7 881 aa10.03□□□□□ -0.8
SCNM1-202ENST00000368905 FAM171BQ6P995 826 aa10.03□□□□□ -0.8
SCNM1-202ENST00000368905 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.03□□□□□ -0.8
SCNM1-202ENST00000368905 TNS4Q8IZW8 715 aa10.03□□□□□ -0.8
SCNM1-202ENST00000368905 SCML4Q8N228 414 aa10.03□□□□□ -0.8
SCNM1-202ENST00000368905 MIER2Q8N344 545 aa10.03□□□□□ -0.8
SCNM1-202ENST00000368905 OR8K5Q8NH50 307 aa10.03□□□□□ -0.8
SCNM1-202ENST00000368905 CASKIN2Q8WXE0 1202 aa10.03□□□□□ -0.8
SCNM1-202ENST00000368905 CCDC127Q96BQ5 260 aa10.03□□□□□ -0.8
SCNM1-202ENST00000368905 PGAP3Q96FM1 320 aaPredicted RBP10.03□□□□□ -0.8
SCNM1-202ENST00000368905 SCLYQ96I15 445 aa10.03□□□□□ -0.8
SCNM1-202ENST00000368905 LRFN3Q9BTN0 628 aa10.03□□□□□ -0.8
SCNM1-202ENST00000368905 SF3B5Q9BWJ5 86 aaKnown RBP10.03□□□□□ -0.8
SCNM1-202ENST00000368905 GPRC5DQ9NZD1 345 aa10.03□□□□□ -0.8
SCNM1-202ENST00000368905 ARID2Q68CP9 1835 aa10.03□□□□□ -0.8
SCNM1-202ENST00000368905 A0A1W2PQU0 124 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 TMEM150BA6NC51 233 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 FAM187AA6NFU0 413 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 ANKRD63C9JTQ0 380 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 FPGTO14772 594 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 ZNF862O60290 1169 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 DNAJB5O75953 348 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 PTBP3O95758 552 aaKnown RBP10.02□□□□□ -0.8
SCNM1-202ENST00000368905 FGGP02679 453 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 MYBL1P10243 752 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 HOXB8P17481 243 aaPredicted RBP10.02□□□□□ -0.8
SCNM1-202ENST00000368905 PSMA2P25787 234 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 HSPA9P38646 679 aaKnown RBP10.02□□□□□ -0.8
SCNM1-202ENST00000368905 MECP2P51608 486 aaKnown RBP10.02□□□□□ -0.8
SCNM1-202ENST00000368905 HIRAP54198 1017 aaPredicted RBP10.02□□□□□ -0.8
SCNM1-202ENST00000368905 YPEL5P62699 121 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 CDR2Q01850 454 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 AARS2Q5JTZ9 985 aaKnown RBP10.02□□□□□ -0.8
SCNM1-202ENST00000368905 DEPDC1Q5TB30 811 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 SEL1L2Q5TEA6 688 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 FAM160B1Q5W0V3 765 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 ZNF813Q6ZN06 617 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 TPGS1Q6ZTW0 290 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 TRMT1LQ7Z2T5 733 aaKnown RBP10.02□□□□□ -0.8
SCNM1-202ENST00000368905 ZNF677Q86XU0 584 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 GPC2Q8N158 579 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 TMEM145Q8NBT3 493 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 OR6J1Q8NGC5 347 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 AKR7LQ8NHP1 331 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 OLIG1Q8TAK6 271 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 TANKQ92844 425 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 FAM162AQ96A26 154 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 WNK4Q96J92 1243 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 PHF12Q96QT6 1004 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 RBM4BQ9BQ04 359 aaKnown RBP10.02□□□□□ -0.8
SCNM1-202ENST00000368905 JPH2Q9BR39 696 aaPredicted RBP10.02□□□□□ -0.8
SCNM1-202ENST00000368905 SH2D3AQ9BRG2 576 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 CCM2Q9BSQ5 444 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 RBM4Q9BWF3 364 aaKnown RBP10.02□□□□□ -0.8
SCNM1-202ENST00000368905 POLR3FQ9H1D9 316 aaPredicted RBP10.02□□□□□ -0.8
SCNM1-202ENST00000368905 SUV39H2Q9H5I1 410 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 ZNF302Q9NR11 478 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 KLC4Q9NSK0 619 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 ARHGEF38Q9NXL2 777 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 MRPS2Q9Y399 296 aaKnown RBP10.02□□□□□ -0.8
SCNM1-202ENST00000368905 NPFFR2Q9Y5X5 522 aa10.02□□□□□ -0.8
SCNM1-202ENST00000368905 ZNF541Q9H0D2 1346 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 A0A0A6YYJ9 748 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 SLCO1B7G3V0H7 640 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 MED7O43513 233 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 STBD1O95210 358 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 GAS8O95995 478 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 ALPPP05187 535 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 CYC1P08574 325 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 ALPPL2P10696 532 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 M6PRP20645 277 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 AHCYP23526 432 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 SLC7A1P30825 629 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 NAMPTP43490 491 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 RGS19P49795 217 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 PTENP60484 403 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 FAM189BP81408 668 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 GAD2Q05329 585 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 EMC2Q15006 297 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 SEC23BQ15437 767 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 KYAT1Q16773 422 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 CLEC16AQ2KHT3 1053 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 ANKRD20A4Q4UJ75 823 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 ANKRD20A8PQ5CZ79 823 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 ANKRD20A2Q5SQ80 823 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 ANKRD20A1Q5TYW2 823 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 FAM122CQ6P4D5 195 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 UBE2R2Q712K3 238 aaPredicted RBP10.02□□□□□ -0.81
SCNM1-202ENST00000368905 PXKQ7Z7A4 578 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 CCNJLQ8IV13 435 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 IQCKQ8N0W5 287 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 PLD5Q8N7P1 536 aa10.02□□□□□ -0.81
SCNM1-202ENST00000368905 SETD9Q8NE22 299 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms