RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 CCNL2Q96S94 520 aaPredicted RBP16.04■□□□□ 0.16
CKS1B-202ENST00000368436 TEX101Q9BY14 249 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 SEMA4CQ9C0C4 833 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 ISCUQ9H1K1 167 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 DPEP2Q9H4A9 486 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 ETNK2Q9NVF9 386 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 KCTD5Q9NXV2 234 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.04■□□□□ 0.16
CKS1B-202ENST00000368436 LRIT1Q9P2V4 623 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 ATXN7L1Q9ULK2 861 aaPredicted RBP16.04■□□□□ 0.16
CKS1B-202ENST00000368436 PCDHGC4Q9Y5F7 938 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 RNF215Q9Y6U7 377 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 ZNF462Q96JM2 2506 aa16.04■□□□□ 0.16
CKS1B-202ENST00000368436 PRSS38A1L453 326 aa16.03■□□□□ 0.16
CKS1B-202ENST00000368436 SMTNL1A8MU46 457 aa16.03■□□□□ 0.16
CKS1B-202ENST00000368436 B4DGG1 531 aa16.03■□□□□ 0.16
CKS1B-202ENST00000368436 NVLO15381 856 aaKnown RBP16.03■□□□□ 0.16
CKS1B-202ENST00000368436 NUDT21O43809 227 aaKnown RBP16.03■□□□□ 0.16
CKS1B-202ENST00000368436 HEXIM1O94992 359 aaKnown RBP16.03■□□□□ 0.16
CKS1B-202ENST00000368436 ZIC2O95409 532 aaPredicted RBP16.03■□□□□ 0.16
CKS1B-202ENST00000368436 FUCA1P04066 466 aa16.03■□□□□ 0.16
CKS1B-202ENST00000368436 MYCLP1P12525 358 aaPredicted RBP16.03■□□□□ 0.16
CKS1B-202ENST00000368436 HGFP14210 728 aa16.03■□□□□ 0.16
CKS1B-202ENST00000368436 TCF4P15884 667 aa16.03■□□□□ 0.16
CKS1B-202ENST00000368436 VIPR1P32241 457 aa16.03■□□□□ 0.16
CKS1B-202ENST00000368436 ARL4AP40617 200 aa16.03■□□□□ 0.16
CKS1B-202ENST00000368436 KLHL30Q0D2K2 578 aa16.03■□□□□ 0.16
CKS1B-202ENST00000368436 LY6DQ14210 128 aa16.03■□□□□ 0.16
CKS1B-202ENST00000368436 ZNF235Q14590 738 aa16.03■□□□□ 0.16
CKS1B-202ENST00000368436 ZSCAN23Q3MJ62 389 aa16.03■□□□□ 0.16
CKS1B-202ENST00000368436 KIAA1614Q5VZ46 1190 aa16.03■□□□□ 0.16
CKS1B-202ENST00000368436 TMCO3Q6UWJ1 677 aa16.03■□□□□ 0.16
CKS1B-202ENST00000368436 NUS1Q96E22 293 aa16.03■□□□□ 0.16
CKS1B-202ENST00000368436 MGME1Q9BQP7 344 aa16.03■□□□□ 0.16
CKS1B-202ENST00000368436 NOD2Q9HC29 1040 aa16.03■□□□□ 0.16
CKS1B-202ENST00000368436 MYO1AQ9UBC5 1043 aa16.03■□□□□ 0.16
CKS1B-202ENST00000368436 PHTF1Q9UMS5 762 aa16.03■□□□□ 0.16
CKS1B-202ENST00000368436 A0A1B0GTH6 734 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 PSMD11O00231 422 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 CPP00450 1065 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 CEACAM5P06731 702 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 JMJD7P0C870 316 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 SKILP12757 684 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 CCNB1P14635 433 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 LHCGRP22888 699 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 TEAD1P28347 426 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 B4GALNT1Q00973 533 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 TRAF2Q12933 501 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 ARHGEF7Q14155 803 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 RALGPS1Q5JS13 557 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 TMPRSS9Q7Z410 1059 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 HSD11B1LQ7Z5J1 315 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 NRROSQ86YC3 692 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 JAMLQ86YT9 394 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 SLITRK4Q8IW52 837 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 KIAA1524Q8TCG1 905 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 DTD2Q96FN9 168 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 SCRN2Q96FV2 425 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 MED8Q96G25 268 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 NAP1L5Q96NT1 182 aaPredicted RBP16.02■□□□□ 0.16
CKS1B-202ENST00000368436 CSPG4P5Q96PW8 444 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 FRMD8Q9BZ67 464 aaPredicted RBP16.02■□□□□ 0.16
CKS1B-202ENST00000368436 PHPT1Q9NRX4 125 aaPredicted RBP16.02■□□□□ 0.16
CKS1B-202ENST00000368436 SPATS2LQ9NUQ6 558 aaKnown RBP16.02■□□□□ 0.16
CKS1B-202ENST00000368436 TRNAU1APQ9NX07 287 aaKnown RBP16.02■□□□□ 0.16
CKS1B-202ENST00000368436 TMEM63CQ9P1W3 806 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 PISDQ9UG56 409 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 MOSPD1Q9UJG1 213 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 PPIL1Q9Y3C6 166 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 LOXL2Q9Y4K0 774 aa16.02■□□□□ 0.16
CKS1B-202ENST00000368436 B4GAT1O43505 415 aa16.01■□□□□ 0.15
CKS1B-202ENST00000368436 FGF1P05230 155 aa16.01■□□□□ 0.15
CKS1B-202ENST00000368436 RARAP10276 462 aa16.01■□□□□ 0.15
CKS1B-202ENST00000368436 CYP2A6P11509 494 aaPredicted RBP16.01■□□□□ 0.15
CKS1B-202ENST00000368436 NFKBIAP25963 317 aa16.01■□□□□ 0.15
CKS1B-202ENST00000368436 CDH6P55285 790 aa16.01■□□□□ 0.15
CKS1B-202ENST00000368436 PIGHQ14442 188 aaPredicted RBP16.01■□□□□ 0.15
CKS1B-202ENST00000368436 NR1I3Q14994 352 aa16.01■□□□□ 0.15
CKS1B-202ENST00000368436 NR1D2Q14995 579 aa16.01■□□□□ 0.15
CKS1B-202ENST00000368436 SMTNL2Q2TAL5 461 aa16.01■□□□□ 0.15
CKS1B-202ENST00000368436 FIGNQ5HY92 759 aa16.01■□□□□ 0.15
CKS1B-202ENST00000368436 ZNF438Q7Z4V0 828 aa16.01■□□□□ 0.15
CKS1B-202ENST00000368436 HEATR4Q86WZ0 1026 aa16.01■□□□□ 0.15
CKS1B-202ENST00000368436 BBS5Q8N3I7 341 aa16.01■□□□□ 0.15
CKS1B-202ENST00000368436 PDCD6IPQ8WUM4 868 aaKnown RBP16.01■□□□□ 0.15
CKS1B-202ENST00000368436 TEKT4Q8WW24 435 aa16.01■□□□□ 0.15
CKS1B-202ENST00000368436 HSPH1Q92598 858 aa16.01■□□□□ 0.15
CKS1B-202ENST00000368436 MCCC1Q96RQ3 725 aaPredicted RBP16.01■□□□□ 0.15
CKS1B-202ENST00000368436 CARS2Q9HA77 564 aaKnown RBP16.01■□□□□ 0.15
CKS1B-202ENST00000368436 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.01■□□□□ 0.15
CKS1B-202ENST00000368436 NPIPB15A6NHN6 443 aaPredicted RBP16■□□□□ 0.15
CKS1B-202ENST00000368436 B8ZZF3 427 aa16■□□□□ 0.15
CKS1B-202ENST00000368436 PGLSO95336 258 aa16■□□□□ 0.15
CKS1B-202ENST00000368436 LIPCP11150 499 aa16■□□□□ 0.15
CKS1B-202ENST00000368436 ITIH1P19827 911 aa16■□□□□ 0.15
CKS1B-202ENST00000368436 ETV5P41161 510 aa16■□□□□ 0.15
CKS1B-202ENST00000368436 ETV3P41162 512 aa16■□□□□ 0.15
CKS1B-202ENST00000368436 CDK3Q00526 305 aa16■□□□□ 0.15
CKS1B-202ENST00000368436 TGIF1Q15583 401 aa16■□□□□ 0.15
CKS1B-202ENST00000368436 CLPPQ16740 277 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms