RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 PPIDQ08752 370 aaKnown RBP7.4□□□□□ -1.22
CLCN3-202ENST00000360642 NME3Q13232 169 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 KPNB1Q14974 876 aaKnown RBP7.4□□□□□ -1.22
CLCN3-202ENST00000360642 TBCCQ15814 346 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 MDH1BQ5I0G3 518 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 TMEM135Q86UB9 458 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 KIRREL3Q8IZU9 778 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 SIX6OS1Q8N1H7 587 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 CCNYQ8ND76 341 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 ZMIZ2Q8NF64 920 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 PIWIL2Q8TC59 973 aaKnown RBP7.4□□□□□ -1.22
CLCN3-202ENST00000360642 PGBD4Q96DM1 585 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 EBF4Q9BQW3 602 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 C1orf21Q9H246 121 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 STN1Q9H668 368 aaKnown RBP7.4□□□□□ -1.22
CLCN3-202ENST00000360642 MARCOQ9UEW3 520 aaPredicted RBP7.4□□□□□ -1.22
CLCN3-202ENST00000360642 FBXW11Q9UKB1 542 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 SORCS3Q9UPU3 1222 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 SCN4AP35499 1836 aa7.4□□□□□ -1.22
CLCN3-202ENST00000360642 SYNJ2BP-COX16A0A087WUM0 186 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 GLTPD2A6NH11 291 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 H0Y3Z8 333 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 LIN7AO14910 233 aaPredicted RBP7.4□□□□□ -1.23
CLCN3-202ENST00000360642 NDUFS2O75306 463 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 FAM200BP0CF97 657 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 ERVK-10P10266 1014 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 GP5P40197 560 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 SLC1A6P48664 564 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 TAF11Q15544 211 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 GRTP1Q5TC63 336 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 BHLHA9Q7RTU4 235 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 PID1Q7Z2X4 250 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 MIER2Q8N344 545 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 CELF5Q8N6W0 485 aaKnown RBP7.4□□□□□ -1.23
CLCN3-202ENST00000360642 EFHBQ8N7U6 833 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 NAT16Q8N8M0 369 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 MCUR1Q96AQ8 359 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 CERS2Q96G23 380 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 SORT1Q99523 831 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 CPNE1Q99829 537 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 SMOQ99835 787 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 BOCQ9BWV1 1114 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 ULBP1Q9BZM6 244 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 SPON1Q9HCB6 807 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 CASS4Q9NQ75 786 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 TMEM30AQ9NV96 361 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.4□□□□□ -1.23
CLCN3-202ENST00000360642 COX16Q9P0S2 106 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 SEPT10Q9P0V9 454 aa7.4□□□□□ -1.23
CLCN3-202ENST00000360642 PNMA8BQ9ULN7 279 aaPredicted RBP7.4□□□□□ -1.23
CLCN3-202ENST00000360642 TRIP12Q14669 1992 aaPredicted RBP7.4□□□□□ -1.23
CLCN3-202ENST00000360642 ZCWPW2A0A1B0GU75 182 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 LRRC14BA6NHZ5 514 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 HHLA1C9JL84 531 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 KCNK1O00180 336 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 ZNF195O14628 629 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 NCAM2O15394 837 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 ENO1P06733 434 aaKnown RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 ALOX15P16050 662 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 AOC1P19801 751 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 ARRB2P32121 409 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 MLH1P40692 756 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 CACNA2D1P54289 1103 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 SESN3P58005 492 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 RPL10AP62906 217 aaKnown RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 OLIG2Q13516 323 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 CRY1Q16526 586 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 RABGAP1LQ5R372 815 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 GPRIN1Q7Z2K8 1008 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 MAVSQ7Z434 540 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 NPWQ8N729 165 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 RBM15BQ8NDT2 890 aaKnown RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 OR52K1Q8NGK4 314 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 ZSCAN18Q8TBC5 510 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 NRG4Q8WWG1 115 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 ATP2A3Q93084 1043 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 KCNK16Q96T55 309 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 CNGB3Q9NQW8 809 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 DDX43Q9NXZ2 648 aaKnown RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 IL1RAPL1Q9NZN1 696 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 TMEM216Q9P0N5 145 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 DPP7Q9UHL4 492 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 SRPK3Q9UPE1 567 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 RPS6KL1Q9Y6S9 549 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 MYO18AQ92614 2054 aaKnown RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 C17orf102A2RUQ5 167 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 PRR5-ARHGAP8B1AHC4 643 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 F8W8V4 182 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 LYPLA1O75608 230 aaPredicted RBP7.39□□□□□ -1.23
CLCN3-202ENST00000360642 USP1O94782 785 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 PSMG1O95456 288 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 SERPINE1P05121 402 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 CYP2B6P20813 491 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 ATP6V1C1P21283 382 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 PEX2P28328 305 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 PGM1P36871 562 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 CD96P40200 585 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 CPA2P48052 419 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 CPT1AP50416 773 aa7.39□□□□□ -1.23
CLCN3-202ENST00000360642 RABGGTBP53611 331 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms