RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 TAAR2Q9P1P5 351 aa13.87□□□□□ -0.19
VPS29-201ENST00000360579 FHOD1Q9Y613 1164 aa13.87□□□□□ -0.19
VPS29-201ENST00000360579 TEX33O43247 280 aa13.86□□□□□ -0.19
VPS29-201ENST00000360579 ECEL1O95672 775 aa13.86□□□□□ -0.19
VPS29-201ENST00000360579 PRKCGP05129 697 aa13.86□□□□□ -0.19
VPS29-201ENST00000360579 THRAP10827 490 aa13.86□□□□□ -0.19
VPS29-201ENST00000360579 KRT3P12035 628 aa13.86□□□□□ -0.19
VPS29-201ENST00000360579 MAP4P27816 1152 aaKnown RBP13.86□□□□□ -0.19
VPS29-201ENST00000360579 AIF1P55008 147 aa13.86□□□□□ -0.19
VPS29-201ENST00000360579 GPLD1P80108 840 aa13.86□□□□□ -0.19
VPS29-201ENST00000360579 MC1RQ01726 317 aa13.86□□□□□ -0.19
VPS29-201ENST00000360579 BCL2L1Q07817 233 aa13.86□□□□□ -0.19
VPS29-201ENST00000360579 RALGDSQ12967 914 aa13.86□□□□□ -0.19
VPS29-201ENST00000360579 SEPT6Q14141 434 aa13.86□□□□□ -0.19
VPS29-201ENST00000360579 VWA3BQ502W6 1294 aa13.86□□□□□ -0.19
VPS29-201ENST00000360579 DPY19L2P1Q6NXN4 242 aa13.86□□□□□ -0.19
VPS29-201ENST00000360579 DPPA4Q7L190 304 aa13.86□□□□□ -0.19
VPS29-201ENST00000360579 SRLQ86TD4 932 aa13.86□□□□□ -0.19
VPS29-201ENST00000360579 ATCAYQ86WG3 371 aa13.86□□□□□ -0.19
VPS29-201ENST00000360579 NLGN4XQ8N0W4 816 aa13.86□□□□□ -0.19
VPS29-201ENST00000360579 NLGN4YQ8NFZ3 816 aaPredicted RBP13.86□□□□□ -0.19
VPS29-201ENST00000360579 JOSD2Q8TAC2 188 aa13.86□□□□□ -0.19
VPS29-201ENST00000360579 APOBEC4Q8WW27 367 aaKnown RBP13.86□□□□□ -0.19
VPS29-201ENST00000360579 ECHDC3Q96DC8 303 aa13.86□□□□□ -0.19
VPS29-201ENST00000360579 NAA15Q9BXJ9 866 aaKnown RBP13.86□□□□□ -0.19
VPS29-201ENST00000360579 STK33Q9BYT3 514 aa13.86□□□□□ -0.19
VPS29-201ENST00000360579 PDFQ9HBH1 243 aa13.86□□□□□ -0.19
VPS29-201ENST00000360579 ZNF71Q9NQZ8 489 aaPredicted RBP13.86□□□□□ -0.19
VPS29-201ENST00000360579 SDK2Q58EX2 2172 aa13.86□□□□□ -0.19
VPS29-201ENST00000360579 LRRK1Q38SD2 2015 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 IGHV1OR21-1A0A087WYE8 117 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 F8VZ95 297 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 CREB3O43889 395 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 PRAMEF11O60813 436 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 CYP1A1P04798 512 aaPredicted RBP13.85□□□□□ -0.19
VPS29-201ENST00000360579 UCHL3P15374 230 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 GPD1P21695 349 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 NFKBIAP25963 317 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 ERCC5P28715 1186 aaPredicted RBP13.85□□□□□ -0.19
VPS29-201ENST00000360579 HTR7P34969 479 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 NDST2P52849 883 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 CDR2Q01850 454 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 ACOX1Q15067 660 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 LACTB2Q53H82 288 aaPredicted RBP13.85□□□□□ -0.19
VPS29-201ENST00000360579 TMEM71Q6P5X7 295 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 TRIM72Q6ZMU5 477 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 FAM129CQ86XR2 697 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 NRROSQ86YC3 692 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 NRSN1Q8IZ57 195 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 PYROXD2Q8N2H3 581 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 ABHD17AQ96GS6 310 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 C11orf70Q9BRQ4 267 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 ZPBPQ9BS86 351 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 SELENOOQ9BVL4 669 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 ZMYND15Q9H091 742 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 LRRC4CQ9HCJ2 640 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 KCNK4Q9NYG8 393 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 KIAA1468Q9P260 1216 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 PILRAQ9UKJ1 303 aa13.85□□□□□ -0.19
VPS29-201ENST00000360579 USP9XQ93008 2570 aaPredicted RBP13.85□□□□□ -0.19
VPS29-201ENST00000360579 A0A1W2PQ67 120 aa13.84□□□□□ -0.19
VPS29-201ENST00000360579 ARHGAP42A6NI28 874 aa13.84□□□□□ -0.19
VPS29-201ENST00000360579 EFCAB7A8K855 629 aa13.84□□□□□ -0.19
VPS29-201ENST00000360579 NKX2-8O15522 239 aa13.84□□□□□ -0.19
VPS29-201ENST00000360579 PALMO75781 387 aa13.84□□□□□ -0.19
VPS29-201ENST00000360579 CEACAM5P06731 702 aa13.84□□□□□ -0.19
VPS29-201ENST00000360579 RFC1P35251 1148 aaPredicted RBP13.84□□□□□ -0.19
VPS29-201ENST00000360579 NOP2P46087 812 aaKnown RBP13.84□□□□□ -0.19
VPS29-201ENST00000360579 GNPDA1P46926 289 aa13.84□□□□□ -0.19
VPS29-201ENST00000360579 GSCP56915 257 aaPredicted RBP13.84□□□□□ -0.19
VPS29-201ENST00000360579 NSUN2Q08J23 767 aaKnown RBP eCLIP13.84□□□□□ -0.19
VPS29-201ENST00000360579 CDC20Q12834 499 aa13.84□□□□□ -0.19
VPS29-201ENST00000360579 KLRB1Q12918 225 aa13.84□□□□□ -0.19
VPS29-201ENST00000360579 CRTC2Q53ET0 693 aaPredicted RBP13.84□□□□□ -0.19
VPS29-201ENST00000360579 NKAIN2Q5VXU1 208 aa13.84□□□□□ -0.19
VPS29-201ENST00000360579 SCYL2Q6P3W7 929 aa13.84□□□□□ -0.19
VPS29-201ENST00000360579 SLC30A9Q6PML9 568 aa13.84□□□□□ -0.19
VPS29-201ENST00000360579 PHLDB2Q86SQ0 1253 aa13.84□□□□□ -0.19
VPS29-201ENST00000360579 MLKLQ8NB16 471 aa13.84□□□□□ -0.19
VPS29-201ENST00000360579 NUS1Q96E22 293 aa13.84□□□□□ -0.19
VPS29-201ENST00000360579 TUBGCP2Q9BSJ2 902 aa13.84□□□□□ -0.19
VPS29-201ENST00000360579 TEX101Q9BY14 249 aa13.84□□□□□ -0.19
VPS29-201ENST00000360579 TRIT1Q9H3H1 467 aaKnown RBP13.84□□□□□ -0.19
VPS29-201ENST00000360579 LRRC19Q9H756 370 aa13.84□□□□□ -0.19
VPS29-201ENST00000360579 SUDS3Q9H7L9 328 aaPredicted RBP13.84□□□□□ -0.19
VPS29-201ENST00000360579 NOCTQ9UK39 431 aaKnown RBP13.84□□□□□ -0.19
VPS29-201ENST00000360579 UNC79Q9P2D8 2635 aa13.83□□□□□ -0.19
VPS29-201ENST00000360579 BLACEA4D250 179 aa13.83□□□□□ -0.2
VPS29-201ENST00000360579 ANKRD62A6NC57 917 aa13.83□□□□□ -0.2
VPS29-201ENST00000360579 J3KR12 359 aa13.83□□□□□ -0.2
VPS29-201ENST00000360579 PES1O00541 588 aaKnown RBP13.83□□□□□ -0.2
VPS29-201ENST00000360579 PRKAR1AP10644 381 aa13.83□□□□□ -0.2
VPS29-201ENST00000360579 DESP17661 470 aa13.83□□□□□ -0.2
VPS29-201ENST00000360579 GM2AP17900 193 aa13.83□□□□□ -0.2
VPS29-201ENST00000360579 AK4P27144 223 aaPredicted RBP13.83□□□□□ -0.2
VPS29-201ENST00000360579 NSFP46459 744 aaKnown RBP13.83□□□□□ -0.2
VPS29-201ENST00000360579 CD97P48960 835 aa13.83□□□□□ -0.2
VPS29-201ENST00000360579 AP1S1P61966 158 aa13.83□□□□□ -0.2
VPS29-201ENST00000360579 CTBSQ01459 385 aa13.83□□□□□ -0.2
VPS29-201ENST00000360579 ABHD18Q0P651 414 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms