RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 MBTD1Q05BQ5 628 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 KIAA1324Q6UXG2 1013 aaKnown RBP16.05■□□□□ 0.16
COL18A1-203ENST00000359759 CCDC36Q8IYA8 594 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 GLIS3Q8NEA6 775 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 PIK3C3Q8NEB9 887 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 GAL3ST3Q96A11 431 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 SLC35C1Q96A29 364 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 HAVCR1Q96D42 359 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 CIB1Q99828 191 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 ACAT2Q9BWD1 397 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 UXTQ9UBK9 157 aaPredicted RBP16.05■□□□□ 0.16
COL18A1-203ENST00000359759 ZNF214Q9UL59 606 aaPredicted RBP16.05■□□□□ 0.16
COL18A1-203ENST00000359759 SORCS3Q9UPU3 1222 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 GRIP1Q9Y3R0 1128 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 E7ENX8 843 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 OTCP00480 354 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 LYNP07948 512 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 CXCR2P25025 360 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 MANFP55145 182 aaKnown RBP16.05■□□□□ 0.16
COL18A1-203ENST00000359759 SNAP47Q5SQN1 464 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 NBPF12Q5TAG4 269 aaPredicted RBP16.05■□□□□ 0.16
COL18A1-203ENST00000359759 CHIAQ9BZP6 476 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 SUCOQ9UBS9 1254 aaKnown RBP16.05■□□□□ 0.16
COL18A1-203ENST00000359759 A0A0J9YYE9 177 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 EML1O00423 815 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 AZIN1O14977 448 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 NDUFS2O75306 463 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 NOS2P35228 1153 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 TTPAP49638 278 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 SLC26A2P50443 739 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 CDH13P55290 713 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 SDHAF4Q5VUM1 108 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 ATP6V1C2Q8NEY4 427 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 LNX1Q8TBB1 728 aaPredicted RBP16.05■□□□□ 0.16
COL18A1-203ENST00000359759 ART4Q93070 314 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 FATE1Q969F0 183 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 PPCDCQ96CD2 204 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 ACE2Q9BYF1 805 aaPredicted RBP16.05■□□□□ 0.16
COL18A1-203ENST00000359759 PRDM8Q9NQV8 689 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 MRPL17Q9NRX2 175 aaKnown RBP16.05■□□□□ 0.16
COL18A1-203ENST00000359759 RPTORQ8N122 1335 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 SIGLEC16A6NMB1 481 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 SLC22A3O75751 556 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 MPSTP25325 297 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 PPP4CP60510 307 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 MYBPC3Q14896 1274 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 CHST4Q8NCG5 386 aa16.05■□□□□ 0.16
COL18A1-203ENST00000359759 AARSD1Q9BTE6 412 aaKnown RBP16.05■□□□□ 0.16
COL18A1-203ENST00000359759 CORO1CQ9ULV4 474 aaPredicted RBP16.05■□□□□ 0.16
COL18A1-203ENST00000359759 RECQL4O94761 1208 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 MT-ND1P03886 318 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 AZGP1P25311 298 aaKnown RBP16.04■□□□□ 0.16
COL18A1-203ENST00000359759 DIRAS2Q96HU8 199 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 RTFDC1Q9BY42 306 aaPredicted RBP16.04■□□□□ 0.16
COL18A1-203ENST00000359759 ACTL7BQ9Y614 415 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 FAM155BO75949 473 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 CCNDBP1O95273 360 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 SERPINA3P01011 423 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 NR2F6P10588 404 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 SNRPD1P62314 119 aaKnown RBP16.04■□□□□ 0.16
COL18A1-203ENST00000359759 SIM2Q14190 667 aaPredicted RBP16.04■□□□□ 0.16
COL18A1-203ENST00000359759 SENP8Q96LD8 212 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 LGMNQ99538 433 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 NEUROD4Q9HD90 331 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 CIDEBQ9UHD4 219 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 FGF10O15520 208 aaPredicted RBP16.04■□□□□ 0.16
COL18A1-203ENST00000359759 CHP2O43745 196 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 CYP1A2P05177 515 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 GIMD1P0DJR0 217 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 TCEA1P23193 301 aaKnown RBP16.04■□□□□ 0.16
COL18A1-203ENST00000359759 ZNF730Q6ZMV8 503 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 CMC1Q7Z7K0 106 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 RAB43Q86YS6 212 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 GPR152Q8TDT2 470 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 KAT2AQ92830 837 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 FZD1Q9UP38 647 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 MAGEC1O60732 1142 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 UGT2B11O75310 529 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 SERPINB7O75635 380 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 GABRB2P47870 512 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 BICRALQ6AI39 1079 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 ARRDC4Q8NCT1 418 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 RNF31Q96EP0 1072 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 SEMA3CQ99985 751 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 DKK3Q9UBP4 350 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 TNFSF13BQ9Y275 285 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 TMX2Q9Y320 296 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 CAPN8A6NHC0 703 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 RPS12P25398 132 aaKnown RBP16.04■□□□□ 0.16
COL18A1-203ENST00000359759 RAB27AP51159 221 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 ELAVL2Q12926 359 aaKnown RBP16.04■□□□□ 0.16
COL18A1-203ENST00000359759 PEX6Q13608 980 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 SEC23AQ15436 765 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 OR8H3Q8N146 312 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 OR52J3Q8NH60 311 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 TTLL2Q9BWV7 592 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 SPATC1LQ9H0A9 340 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 MED28Q9H204 178 aa16.04■□□□□ 0.16
COL18A1-203ENST00000359759 WDR55Q9H6Y2 383 aaPredicted RBP16.04■□□□□ 0.16
COL18A1-203ENST00000359759 OSER1Q9NX31 292 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms