RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 PSMA3P25788 255 aa12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 CD6P30203 668 aa12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 STC1P52823 247 aa12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 CREB5Q02930 508 aa12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 CSTF1Q05048 431 aaKnown RBP12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 DHX9Q08211 1270 aaKnown RBP12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 MTM1Q13496 603 aa12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 LAMB3Q13751 1172 aa12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 ARHGEF7Q14155 803 aa12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 NAA30Q147X3 362 aaPredicted RBP12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 USP39Q53GS9 565 aaKnown RBP12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 DNAJC21Q5F1R6 531 aaKnown RBP12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 LRRC66Q68CR7 880 aa12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 DENND2CQ68D51 928 aa12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 LYSMD3Q7Z3D4 306 aa12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 RAVER1Q8IY67 606 aaKnown RBP12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 MPP5Q8N3R9 675 aa12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 OR2T34Q8NGX1 318 aa12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 PTCD2Q8WV60 388 aaKnown RBP12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 LRRC39Q96DD0 335 aa12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 TOE1Q96GM8 510 aaKnown RBP12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 C19orf43Q9BQ61 176 aa12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 KIFC1Q9BW19 673 aa12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 FAM126AQ9BYI3 521 aaPredicted RBP12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 GPR63Q9BZJ6 419 aa12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 TSPYL1Q9H0U9 437 aa12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 SYBUQ9NX95 663 aa12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 IL17CQ9P0M4 197 aa12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 MTRF1LQ9UGC7 380 aaKnown RBP12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 RIMKLBQ9ULI2 386 aa12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 ARL5AQ9Y689 179 aa12.41□□□□□ -0.42
NIF3L1-201ENST00000359683 HEATR9A2RTY3 570 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 LRRC72A6NJI9 287 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 C2orf81A6NN90 581 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 PCDH8O95206 1070 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 SEMA4FO95754 770 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 TUBBP07437 444 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 LPOP22079 712 aaPredicted RBP12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 FNTBP49356 437 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 LIG3P49916 1009 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 CRADDP78560 199 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 PDE1BQ01064 536 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 ZNF528Q3MIS6 628 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 BBS9Q3SYG4 887 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 CENPUQ71F23 418 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 GLT6D1Q7Z4J2 308 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 LONP2Q86WA8 852 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 FRMD1Q8N878 549 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 CXorf40AQ8TE69 158 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 FMO2Q99518 471 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 PARD6BQ9BYG5 372 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 MRM3Q9HC36 420 aaKnown RBP12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 RAB21Q9UL25 225 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 SOX13Q9UN79 622 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 ZFR2Q9UPR6 939 aaKnown RBP12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 TCAF1Q9Y4C2 921 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 TEX264Q9Y6I9 313 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 TBC1D3DA0A087WVF3 549 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 TBC1D3IA0A087WXS9 549 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 TBC1D3EA0A087X179 549 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 TBC1D3KA0A087X1G2 549 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 RGSL1A5PLK6 1076 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 TBC1D3FA6NER0 549 aaPredicted RBP12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 TBC1D3LB9A6J9 549 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 CTIFO43310 598 aaKnown RBP12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 MMP20O60882 483 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 RNGTTO60942 597 aaKnown RBP12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 BANF1O75531 89 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 C1SP09871 688 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 ELFN1P0C7U0 828 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 TBC1D3HP0C7X1 549 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 GM2AP17900 193 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 ZNF140P52738 457 aaPredicted RBP12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 VSNL1P62760 191 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 RPS21P63220 83 aaKnown RBP12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 PDIA2Q13087 525 aaKnown RBP12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 TMEM259Q4ZIN3 620 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 CCDC38Q502W7 563 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 TSTD2Q5T7W7 516 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 TBC1D3GQ6DHY5 549 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 TBC1D3CQ6IPX1 549 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 KIAA1161Q6NSJ0 714 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 NLRP9Q7RTR0 991 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 HSD11B1LQ7Z5J1 315 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 TECPR1Q7Z6L1 1165 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 TMEM135Q86UB9 458 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 TRIM69Q86WT6 500 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 HORMAD1Q86X24 394 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 RELL1Q8IUW5 271 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 IGDCC3Q8IVU1 814 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 TBC1D3Q8IZP1 549 aaPredicted RBP12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 FAM160A2Q8N612 972 aaPredicted RBP12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 PPHLN1Q8NEY8 458 aaKnown RBP12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 MYRIPQ8NFW9 859 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 STYXQ8WUJ0 223 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 ASB12Q8WXK4 309 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 PEX13Q92968 403 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 COQ10AQ96MF6 247 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms