RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 ATP6V0D2Q8N8Y2 350 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 TRPC4APQ8TEL6 797 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 VPS50Q96JG6 964 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 FERMT1Q9BQL6 677 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 RTKNQ9BST9 563 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 OSBPL6Q9BZF3 934 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 SHCBP1LQ9BZQ2 653 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 PFDN4Q9NQP4 134 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 ITGB1BP2Q9UKP3 347 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 TRHDEQ9UKU6 1024 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 TGM5O43548 720 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 LYPLA1O75608 230 aaPredicted RBP18.66■□□□□ 0.58
SNX11-201ENST00000359238 ALDH1A2O94788 518 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 SLC2A3P11169 496 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 COX4I1P13073 169 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 ALOX15P16050 662 aaPredicted RBP18.66■□□□□ 0.58
SNX11-201ENST00000359238 RHOQP17081 205 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 CTNNB1P35222 781 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 SLC1A6P48664 564 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 NIPAL4Q0D2K0 466 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 MAVSQ7Z434 540 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 UMODL1-AS1Q8N2C9 162 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 IPMKQ8NFU5 416 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 HERVK_113Q902F9 699 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 GLOD4Q9HC38 313 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 SMPD4Q9NXE4 827 aa18.66■□□□□ 0.58
SNX11-201ENST00000359238 ZCWPW2A0A1B0GU75 182 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 PMPCBO75439 489 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 CXCL14O95715 111 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 GSRP00390 522 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 THRAP10827 490 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 MYOGP15173 224 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 TACR2P21452 398 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 ATP5C1P36542 298 aaKnown RBP18.65■□□□□ 0.58
SNX11-201ENST00000359238 NUP107P57740 925 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 ERVFC1P60507 584 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 VEPH1Q14D04 833 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 DENND5AQ6IQ26 1287 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 DNAJB7Q7Z6W7 309 aaPredicted RBP18.65■□□□□ 0.58
SNX11-201ENST00000359238 LGI2Q8N0V4 545 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 PGBD5Q8N414 524 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 TSPAN14Q8NG11 270 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 AGAP2Q99490 1192 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 TCF25Q9BQ70 676 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.65■□□□□ 0.58
SNX11-201ENST00000359238 FNIP2Q9P278 1114 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 PRPF19Q9UMS4 504 aaKnown RBP18.65■□□□□ 0.58
SNX11-201ENST00000359238 LOC100653049A0A140TA62 436 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 CARNS1A5YM72 827 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 DRGXA6NNA5 263 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 E2F6O75461 281 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 KRT34O76011 436 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 PGAM1P18669 254 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 NMBRP28336 390 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 PSMD7P51665 324 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 PGGT1BP53609 377 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 CDKL1Q00532 357 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 PDAP1Q13442 181 aaKnown RBP18.65■□□□□ 0.58
SNX11-201ENST00000359238 TCEAL8Q8IYN2 117 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 PNPLA1Q8N8W4 532 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 ZNF669Q96BR6 464 aaPredicted RBP18.65■□□□□ 0.58
SNX11-201ENST00000359238 PABPC5Q96DU9 382 aaKnown RBP18.65■□□□□ 0.58
SNX11-201ENST00000359238 SERPINI1Q99574 410 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 DNMT3LQ9UJW3 386 aa18.65■□□□□ 0.58
SNX11-201ENST00000359238 MUSKO15146 869 aa18.64■□□□□ 0.57
SNX11-201ENST00000359238 ARHGEF15O94989 841 aa18.64■□□□□ 0.57
SNX11-201ENST00000359238 FGF3P11487 239 aaPredicted RBP18.64■□□□□ 0.57
SNX11-201ENST00000359238 GLDCP23378 1020 aa18.64■□□□□ 0.57
SNX11-201ENST00000359238 ETFBP38117 255 aa18.64■□□□□ 0.57
SNX11-201ENST00000359238 RING1Q06587 406 aa18.64■□□□□ 0.57
SNX11-201ENST00000359238 LPCAT2Q7L5N7 544 aa18.64■□□□□ 0.57
SNX11-201ENST00000359238 LZTR1Q8N653 840 aa18.64■□□□□ 0.57
SNX11-201ENST00000359238 PDZD8Q8NEN9 1154 aa18.64■□□□□ 0.57
SNX11-201ENST00000359238 CEP295NLQ96MC4 621 aa18.64■□□□□ 0.57
SNX11-201ENST00000359238 VAT1Q99536 393 aa18.64■□□□□ 0.57
SNX11-201ENST00000359238 C17orf80Q9BSJ5 609 aa18.64■□□□□ 0.57
SNX11-201ENST00000359238 NT5MQ9NPB1 228 aa18.64■□□□□ 0.57
SNX11-201ENST00000359238 ENTPD7Q9NQZ7 604 aa18.64■□□□□ 0.57
SNX11-201ENST00000359238 TRPM5Q9NZQ8 1165 aa18.64■□□□□ 0.57
SNX11-201ENST00000359238 BCAP29Q9UHQ4 241 aa18.64■□□□□ 0.57
SNX11-201ENST00000359238 CNOT11Q9UKZ1 510 aaKnown RBP18.64■□□□□ 0.57
SNX11-201ENST00000359238 HIDE1A8MVS5 230 aa18.63■□□□□ 0.57
SNX11-201ENST00000359238 MTSS1O43312 755 aa18.63■□□□□ 0.57
SNX11-201ENST00000359238 STC2O76061 302 aa18.63■□□□□ 0.57
SNX11-201ENST00000359238 DNAJB1P25685 340 aa18.63■□□□□ 0.57
SNX11-201ENST00000359238 PEX6Q13608 980 aa18.63■□□□□ 0.57
SNX11-201ENST00000359238 PCSK7Q16549 785 aa18.63■□□□□ 0.57
SNX11-201ENST00000359238 FSCBQ5H9T9 825 aa18.63■□□□□ 0.57
SNX11-201ENST00000359238 HECTD3Q5T447 861 aa18.63■□□□□ 0.57
SNX11-201ENST00000359238 PLPP4Q5VZY2 271 aa18.63■□□□□ 0.57
SNX11-201ENST00000359238 ITPRIPL1Q6GPH6 555 aa18.63■□□□□ 0.57
SNX11-201ENST00000359238 GRAMD4Q6IC98 578 aa18.63■□□□□ 0.57
SNX11-201ENST00000359238 TIFABQ6ZNK6 161 aa18.63■□□□□ 0.57
SNX11-201ENST00000359238 ZNF354CQ86Y25 554 aa18.63■□□□□ 0.57
SNX11-201ENST00000359238 TRIML2Q8N7C3 387 aa18.63■□□□□ 0.57
SNX11-201ENST00000359238 TTC16Q8NEE8 873 aa18.63■□□□□ 0.57
SNX11-201ENST00000359238 SP7Q8TDD2 431 aaPredicted RBP18.63■□□□□ 0.57
SNX11-201ENST00000359238 MRGPRX2Q96LB1 330 aa18.63■□□□□ 0.57
SNX11-201ENST00000359238 MYRFLQ96LU7 910 aa18.63■□□□□ 0.57
SNX11-201ENST00000359238 CCT7Q99832 543 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms