RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 USP34Q70CQ2 3546 aa12.69□□□□□ -0.38
GGPS1-202ENST00000358966 LOC285095A0A1B0GVY8 99 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 ITM2AO43736 263 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 WFS1O76024 890 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 PRLP01236 227 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 TPBGLP0DKB5 382 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 IDO1P14902 403 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 ARRB2P32121 409 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 PTDSS1P48651 473 aaKnown RBP12.68□□□□□ -0.38
GGPS1-202ENST00000358966 PSMD7P51665 324 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 THOC5Q13769 683 aaKnown RBP12.68□□□□□ -0.38
GGPS1-202ENST00000358966 RCN2Q14257 317 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 USP10Q14694 798 aaKnown RBP12.68□□□□□ -0.38
GGPS1-202ENST00000358966 TSTD2Q5T7W7 516 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 PSRC1Q6PGN9 363 aaPredicted RBP12.68□□□□□ -0.38
GGPS1-202ENST00000358966 GRASPQ7Z6J2 395 aaPredicted RBP12.68□□□□□ -0.38
GGPS1-202ENST00000358966 ADGRD2Q7Z7M1 963 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 NUDCD3Q8IVD9 361 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 C10orf107Q8IVU9 208 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 EFHBQ8N7U6 833 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 PRR11Q96HE9 360 aaPredicted RBP12.68□□□□□ -0.38
GGPS1-202ENST00000358966 APOL5Q9BWW9 433 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 TNKS2Q9H2K2 1166 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 LINC00597Q9H2U6 94 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 BPIFA1Q9NP55 256 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 PFDN4Q9NQP4 134 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.68□□□□□ -0.38
GGPS1-202ENST00000358966 SEPT3Q9UH03 358 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 CRYL1Q9Y2S2 319 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 TNRC18O15417 2968 aaPredicted RBP12.68□□□□□ -0.38
GGPS1-202ENST00000358966 MTCL1Q9Y4B5 1905 aaKnown RBP12.68□□□□□ -0.38
GGPS1-202ENST00000358966 A8MX80 341 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 MOSPD3O75425 235 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 ZMPSTE24O75844 475 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 ASLP04424 464 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 RHOP08100 348 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 SULT2A1Q06520 285 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 FASTKD1Q53R41 847 aaKnown RBP12.68□□□□□ -0.38
GGPS1-202ENST00000358966 NEPROQ6NW34 567 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 TIFABQ6ZNK6 161 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 SETD3Q86TU7 594 aaPredicted RBP12.68□□□□□ -0.38
GGPS1-202ENST00000358966 SP7Q8TDD2 431 aaPredicted RBP12.68□□□□□ -0.38
GGPS1-202ENST00000358966 KCTD4Q8WVF5 259 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 PPP2R3CQ969Q6 453 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 EMILIN2Q9BXX0 1053 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 SCUBE2Q9NQ36 999 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 PRKAG3Q9UGI9 489 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 FBXO5Q9UKT4 447 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 BRWD1Q9NSI6 2320 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 TRAV19A0A0A6YYK7 116 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 HEATR9A2RTY3 570 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 PLIN3O60664 434 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 NFKBIAP25963 317 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 CCR10P46092 362 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 CD97P48960 835 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 TRAF2Q12933 501 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 SEMA3AQ14563 771 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 PCLAFQ15004 111 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 CCDC149Q6ZUS6 474 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 CHST9Q7L1S5 443 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 TMEM25Q86YD3 366 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 ELMOD1Q8N336 334 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 AGR3Q8TD06 166 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 HERVK_113Q902F9 699 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 PPP1R14BQ96C90 147 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 TRIB3Q96RU7 358 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 SIKE1Q9BRV8 207 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 ARNT2Q9HBZ2 717 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 INTS6Q9UL03 887 aaKnown RBP12.68□□□□□ -0.38
GGPS1-202ENST00000358966 ZNF711Q9Y462 761 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 N6AMT1Q9Y5N5 214 aa12.68□□□□□ -0.38
GGPS1-202ENST00000358966 FAM95CA0A1B0GW59 222 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 DYTNA2CJ06 578 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 BOLA2-SMG1P6H3BVE0 249 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 PEX11AO75192 247 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 PIGNO95427 931 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 SLC35E2BP0CK96 405 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 CR2P20023 1033 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 CNTFP26441 200 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 WEE1P30291 646 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 PPP3CCP48454 512 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 CDKN1CP49918 316 aaPredicted RBP12.67□□□□□ -0.38
GGPS1-202ENST00000358966 SERPINB8P50452 374 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 PRAMEP78395 509 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 LMAN2Q12907 356 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 RGS9BPQ6ZS82 235 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 PIM3Q86V86 326 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 HJURPQ8NCD3 748 aaPredicted RBP12.67□□□□□ -0.38
GGPS1-202ENST00000358966 MDGA1Q8NFP4 955 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 SGF29Q96ES7 293 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 ALG14Q96F25 216 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 ELMO2Q96JJ3 720 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 OLFM1Q99784 485 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 TLE6Q9H808 572 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 STOML2Q9UJZ1 356 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 OR51B4Q9Y5P0 310 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 RAI2Q9Y5P3 530 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 COMMD3-BMI1R4GMX3 469 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 H0Y3Z8 333 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 BPGMP07738 259 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms