RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 PDGFRLQ15198 375 aa11□□□□□ -0.65
FN1-205ENST00000357867 RFTN2Q52LD8 501 aaPredicted RBP11□□□□□ -0.65
FN1-205ENST00000357867 C2orf27AQ580R0 203 aa11□□□□□ -0.65
FN1-205ENST00000357867 PHF19Q5T6S3 580 aa11□□□□□ -0.65
FN1-205ENST00000357867 PAPD7Q5XG87 772 aaKnown RBP11□□□□□ -0.65
FN1-205ENST00000357867 USP6NLQ92738 828 aa11□□□□□ -0.65
FN1-205ENST00000357867 PCED1BQ96HM7 432 aa11□□□□□ -0.65
FN1-205ENST00000357867 PRICKLE1Q96MT3 831 aaPredicted RBP11□□□□□ -0.65
FN1-205ENST00000357867 CHKBQ9Y259 395 aa11□□□□□ -0.65
FN1-205ENST00000357867 RAI2Q9Y5P3 530 aa11□□□□□ -0.65
FN1-205ENST00000357867 ZFP37Q9Y6Q3 630 aaPredicted RBP11□□□□□ -0.65
FN1-205ENST00000357867 MGRN1O60291 552 aa11□□□□□ -0.65
FN1-205ENST00000357867 SLC35G6P0C7Q6 338 aa11□□□□□ -0.65
FN1-205ENST00000357867 RHOQP17081 205 aa11□□□□□ -0.65
FN1-205ENST00000357867 CCND1P24385 295 aa11□□□□□ -0.65
FN1-205ENST00000357867 UGT1A5P35504 534 aa11□□□□□ -0.65
FN1-205ENST00000357867 RPL4P36578 427 aaKnown RBP11□□□□□ -0.65
FN1-205ENST00000357867 ELOAQ14241 798 aaKnown RBP11□□□□□ -0.65
FN1-205ENST00000357867 APTXQ7Z2E3 356 aaKnown RBP11□□□□□ -0.65
FN1-205ENST00000357867 ZNF786Q8N393 782 aa11□□□□□ -0.65
FN1-205ENST00000357867 IRF7Q92985 503 aa11□□□□□ -0.65
FN1-205ENST00000357867 SCLYQ96I15 445 aa11□□□□□ -0.65
FN1-205ENST00000357867 STRADBQ9C0K7 418 aa11□□□□□ -0.65
FN1-205ENST00000357867 CENPXA8MT69 81 aa11□□□□□ -0.65
FN1-205ENST00000357867 TACR2P21452 398 aa11□□□□□ -0.65
FN1-205ENST00000357867 CDH5P33151 784 aaPredicted RBP11□□□□□ -0.65
FN1-205ENST00000357867 TIE1P35590 1138 aa11□□□□□ -0.65
FN1-205ENST00000357867 PTGES3Q15185 160 aaKnown RBP11□□□□□ -0.65
FN1-205ENST00000357867 MINDY4Q4G0A6 757 aa11□□□□□ -0.65
FN1-205ENST00000357867 RPTNQ6XPR3 784 aa11□□□□□ -0.65
FN1-205ENST00000357867 ILDR1Q86SU0 546 aaPredicted RBP11□□□□□ -0.65
FN1-205ENST00000357867 CAMK1DQ8IU85 385 aa11□□□□□ -0.65
FN1-205ENST00000357867 GPR156Q8NFN8 814 aa11□□□□□ -0.65
FN1-205ENST00000357867 HEPHQ9BQS7 1158 aa11□□□□□ -0.65
FN1-205ENST00000357867 SERHL2Q9H4I8 314 aa11□□□□□ -0.65
FN1-205ENST00000357867 GOLGA2P5Q9HBQ8 144 aa11□□□□□ -0.65
FN1-205ENST00000357867 SERHLQ9NQF3 203 aa11□□□□□ -0.65
FN1-205ENST00000357867 FBXO6Q9NRD1 293 aaPredicted RBP11□□□□□ -0.65
FN1-205ENST00000357867 DMGDHQ9UI17 866 aaKnown RBP11□□□□□ -0.65
FN1-205ENST00000357867 SNX13Q9Y5W8 968 aa11□□□□□ -0.65
FN1-205ENST00000357867 AP3D1O14617 1153 aa11□□□□□ -0.65
FN1-205ENST00000357867 BGNP21810 368 aa11□□□□□ -0.65
FN1-205ENST00000357867 TPP2P29144 1249 aaPredicted RBP11□□□□□ -0.65
FN1-205ENST00000357867 IL12BP29460 328 aa11□□□□□ -0.65
FN1-205ENST00000357867 CPA2P48052 419 aa11□□□□□ -0.65
FN1-205ENST00000357867 MAPKAPK2P49137 400 aa11□□□□□ -0.65
FN1-205ENST00000357867 NDST2P52849 883 aa11□□□□□ -0.65
FN1-205ENST00000357867 MAPKAPK3Q16644 382 aa11□□□□□ -0.65
FN1-205ENST00000357867 PMF1Q6P1K2 205 aa11□□□□□ -0.65
FN1-205ENST00000357867 LCLAT1Q6UWP7 414 aa11□□□□□ -0.65
FN1-205ENST00000357867 ATAD1Q8NBU5 361 aa11□□□□□ -0.65
FN1-205ENST00000357867 FBXO25Q8TCJ0 367 aa11□□□□□ -0.65
FN1-205ENST00000357867 VSTM5A8MXK1 200 aa11□□□□□ -0.65
FN1-205ENST00000357867 FLT3P36888 993 aa11□□□□□ -0.65
FN1-205ENST00000357867 LENG1Q96BZ8 264 aaPredicted RBP11□□□□□ -0.65
FN1-205ENST00000357867 TMEM120AQ9BXJ8 343 aa11□□□□□ -0.65
FN1-205ENST00000357867 DHX33Q9H6R0 707 aaKnown RBP11□□□□□ -0.65
FN1-205ENST00000357867 SGK2Q9HBY8 427 aa11□□□□□ -0.65
FN1-205ENST00000357867 DOCK2Q92608 1830 aa11□□□□□ -0.65
FN1-205ENST00000357867 WTIPA6NIX2 430 aaPredicted RBP11□□□□□ -0.65
FN1-205ENST00000357867 TISP43B9A030 160 aa11□□□□□ -0.65
FN1-205ENST00000357867 H7C0S8 307 aa11□□□□□ -0.65
FN1-205ENST00000357867 CDK14O94921 469 aa11□□□□□ -0.65
FN1-205ENST00000357867 STXBP1P61764 594 aaKnown RBP11□□□□□ -0.65
FN1-205ENST00000357867 KCNMA1Q12791 1236 aa11□□□□□ -0.65
FN1-205ENST00000357867 SAMD4BQ5PRF9 694 aaKnown RBP11□□□□□ -0.65
FN1-205ENST00000357867 ZFP1Q6P2D0 407 aa11□□□□□ -0.65
FN1-205ENST00000357867 ARL14EPQ8N8R7 260 aaPredicted RBP11□□□□□ -0.65
FN1-205ENST00000357867 ITFG1Q8TB96 612 aa11□□□□□ -0.65
FN1-205ENST00000357867 LCN9Q8WX39 176 aa11□□□□□ -0.65
FN1-205ENST00000357867 RIBC2Q9H4K1 309 aa11□□□□□ -0.65
FN1-205ENST00000357867 PRDM12Q9H4Q4 367 aa11□□□□□ -0.65
FN1-205ENST00000357867 SEMA4BQ9NPR2 832 aaPredicted RBP11□□□□□ -0.65
FN1-205ENST00000357867 PCDHB3Q9Y5E6 796 aa11□□□□□ -0.65
FN1-205ENST00000357867 ETS1P14921 441 aa10.99□□□□□ -0.65
FN1-205ENST00000357867 ME2P23368 584 aa10.99□□□□□ -0.65
FN1-205ENST00000357867 ARL2P36404 184 aa10.99□□□□□ -0.65
FN1-205ENST00000357867 ECT2LQ008S8 904 aa10.99□□□□□ -0.65
FN1-205ENST00000357867 ACAP2Q15057 778 aa10.99□□□□□ -0.65
FN1-205ENST00000357867 EIF3MQ7L2H7 374 aaKnown RBP10.99□□□□□ -0.65
FN1-205ENST00000357867 SETD9Q8NE22 299 aa10.99□□□□□ -0.65
FN1-205ENST00000357867 ACMSDQ8TDX5 336 aa10.99□□□□□ -0.65
FN1-205ENST00000357867 KCTD13Q8WZ19 329 aa10.99□□□□□ -0.65
FN1-205ENST00000357867 PEX12O00623 359 aa10.99□□□□□ -0.65
FN1-205ENST00000357867 MSI1O43347 362 aaKnown RBP10.99□□□□□ -0.65
FN1-205ENST00000357867 LBX1P52954 281 aa10.99□□□□□ -0.65
FN1-205ENST00000357867 GNA12Q03113 381 aa10.99□□□□□ -0.65
FN1-205ENST00000357867 ZDHHC13Q8IUH4 622 aa10.99□□□□□ -0.65
FN1-205ENST00000357867 DNAJC28Q9NX36 388 aa10.99□□□□□ -0.65
FN1-205ENST00000357867 LYVE1Q9Y5Y7 322 aa10.99□□□□□ -0.65
FN1-205ENST00000357867 PRG2P13727 222 aa10.99□□□□□ -0.65
FN1-205ENST00000357867 MRPS22P82650 360 aaKnown RBP10.99□□□□□ -0.65
FN1-205ENST00000357867 BMPR2Q13873 1038 aa10.99□□□□□ -0.65
FN1-205ENST00000357867 ZNF618Q5T7W0 954 aa10.99□□□□□ -0.65
FN1-205ENST00000357867 SVOPQ8N4V2 548 aa10.99□□□□□ -0.65
FN1-205ENST00000357867 BRSK1Q8TDC3 778 aa10.99□□□□□ -0.65
FN1-205ENST00000357867 SLC22A18Q96BI1 424 aa10.99□□□□□ -0.65
FN1-205ENST00000357867 TBC1D23Q9NUY8 699 aa10.99□□□□□ -0.65
FN1-205ENST00000357867 RIPK2O43353 540 aa10.99□□□□□ -0.65
FN1-205ENST00000357867 MTHFRP42898 656 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms