RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 MBL2P11226 248 aaPredicted RBP12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 ZNF26P17031 533 aaPredicted RBP12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 CDH2P19022 906 aaPredicted RBP12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 PCSK6P29122 969 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 BMP8BP34820 402 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 PSMD8P48556 350 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 TPI1P60174 286 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 CRADDP78560 199 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 NSUN2Q08J23 767 aaKnown RBP eCLIP12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 GK3PQ14409 553 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 GRASPQ7Z6J2 395 aaPredicted RBP12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 C14orf80Q86SX3 495 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 TP53INP2Q8IXH6 220 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 ST13P5Q8NFI4 369 aaPredicted RBP12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 MIPOL1Q8TD10 442 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 NTAN1Q96AB6 310 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 CNBD2Q96M20 576 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 CEP295NLQ96MC4 621 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 CDRT15Q96T59 188 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 PRPF18Q99633 342 aaKnown RBP12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 MCMBPQ9BTE3 642 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 ASAH2Q9NR71 780 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 SYBUQ9NX95 663 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 MPP6Q9NZW5 540 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 VANGL2Q9ULK5 521 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 RAP2CQ9Y3L5 183 aa12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 MYO18AQ92614 2054 aaKnown RBP12.73□□□□□ -0.37
RTFDC1-202ENST00000357348 KCNU1A8MYU2 1149 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 F5H423 210 aaPredicted RBP12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 AIM2O14862 343 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 HDAC3O15379 428 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 TRMUO75648 421 aaKnown RBP12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 CKMP06732 381 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 POLBP06746 335 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 ZNF23P17027 643 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 HDCP19113 662 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 SPRP35270 261 aaPredicted RBP12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 PRKAA2P54646 552 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 ZXDBP98169 803 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 DCTN2Q13561 401 aaKnown RBP12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 TRIP4Q15650 581 aaPredicted RBP12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 LSM12Q3MHD2 195 aaKnown RBP12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 PIK3R6Q5UE93 754 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 RAP1GAP2Q684P5 730 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 CASC4Q6P4E1 433 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 DHRS4L2Q6PKH6 230 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 VN1R2Q8NFZ6 395 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 ING5Q8WYH8 240 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 SLC39A13Q96H72 371 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 GATA5Q9BWX5 397 aaPredicted RBP12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 LRRC3Q9BY71 257 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 DRC3Q9H069 523 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 COPS7BQ9H9Q2 264 aaPredicted RBP12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 OXSMQ9NWU1 459 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 RCOR3Q9P2K3 495 aaPredicted RBP12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 MAFFQ9ULX9 164 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 ZNF510Q9Y2H8 683 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 AK5Q9Y6K8 562 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 GRID2O43424 1007 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 RHOP08100 348 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 ME2P23368 584 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 SERPINB5P36952 375 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 PPARGP37231 505 aaPredicted RBP12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 DPP6P42658 865 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 SCAPQ12770 1279 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 PPP2R5DQ14738 602 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 CBX2Q14781 532 aaPredicted RBP12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 BRMS1LQ5PSV4 323 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 C6orf52Q5T4I8 152 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 CMC1Q7Z7K0 106 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 DENND1CQ8IV53 801 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 CNTD1Q8N815 330 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 RDH11Q8TC12 318 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 OVCA2Q8WZ82 227 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 MRPS31Q92665 395 aaKnown RBP12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 ZNF597Q96LX8 424 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 LGMNQ99538 433 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 ILKAPQ9H0C8 392 aaPredicted RBP12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 IGSF9Q9P2J2 1179 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 MID2Q9UJV3 735 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 APPL1Q9UKG1 709 aa12.72□□□□□ -0.37
RTFDC1-202ENST00000357348 C2orf16Q68DN1 1984 aa12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 LINC01565O15544 149 aa12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 MFSD11O43934 449 aa12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 ERCC2P18074 760 aa12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 GMPRP36959 345 aa12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 SESN2P58004 480 aaPredicted RBP12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 DPYSQ14117 519 aa12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 MS4A13Q5J8X5 152 aa12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 IYDQ6PHW0 289 aa12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 PDZD4Q76G19 769 aaPredicted RBP12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 TMEM135Q86UB9 458 aa12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 CIR1Q86X95 450 aaPredicted RBP12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 ERI1Q8IV48 349 aaKnown RBP12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 TMEM151AQ8N4L1 468 aa12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 BHLHE22Q8NFJ8 381 aaPredicted RBP12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 TRPC4APQ8TEL6 797 aa12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 PDCD6IPQ8WUM4 868 aaKnown RBP12.71□□□□□ -0.37
RTFDC1-202ENST00000357348 SREK1Q8WXA9 508 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms