RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 TUBB2BQ9BVA1 445 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 FSD1LQ9BXM9 530 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 HDAC8Q9BY41 377 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 SEMA4AQ9H3S1 761 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 FAM96AQ9H5X1 160 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 IL26Q9NPH9 171 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 SMYD2Q9NRG4 433 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 VPS45Q9NRW7 570 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 HAUS2Q9NVX0 235 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 DKK3Q9UBP4 350 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 ANAPC5Q9UJX4 755 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 ST14Q9Y5Y6 855 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 THADAQ6YHU6 1953 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 TBC1D3DA0A087WVF3 549 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 TBC1D3IA0A087WXS9 549 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 TBC1D3EA0A087X179 549 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 TBC1D3KA0A087X1G2 549 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 C1orf232A0A0U1RR37 186 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 ZCWPW2A0A1B0GU75 182 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 A0A1W2PQU0 124 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 TBC1D3FA6NER0 549 aaPredicted RBP4.03□□□□□ -1.76
LIG4-201ENST00000356922 FAM187AA6NFU0 413 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 FOXO6A8MYZ6 492 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 UPK3BL1B0FP48 263 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 TBC1D3LB9A6J9 549 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 UPK3BL2E5RIL1 263 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 E7EVH7 732 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 NPC1O15118 1278 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 SCAMP1O15126 338 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 SOCS5O75159 536 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 MTX2O75431 263 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 ANXA9O76027 345 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 CPP00450 1065 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 EPOP01588 193 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 DNTTP04053 509 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 TBC1D3HP0C7X1 549 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 SP9P0CG40 484 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 XPAP23025 273 aaPredicted RBP4.03□□□□□ -1.76
LIG4-201ENST00000356922 SSTR1P30872 391 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 FDFT1P37268 417 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 HSPA9P38646 679 aaKnown RBP4.03□□□□□ -1.76
LIG4-201ENST00000356922 ELK3P41970 407 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 DRG2P55039 364 aaKnown RBP4.03□□□□□ -1.76
LIG4-201ENST00000356922 XIAPP98170 497 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 LMNB2Q03252 620 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 WSCD2Q2TBF2 565 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 TMEM259Q4ZIN3 620 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 TBC1D3GQ6DHY5 549 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 ITPRIPL1Q6GPH6 555 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 TBC1D3CQ6IPX1 549 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 LRRC8BQ6P9F7 803 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 CCNI2Q6ZMN8 369 aaPredicted RBP4.03□□□□□ -1.76
LIG4-201ENST00000356922 TMC3Q7Z5M5 1100 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 TECPR1Q7Z6L1 1165 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 TBC1D3Q8IZP1 549 aaPredicted RBP4.03□□□□□ -1.76
LIG4-201ENST00000356922 DNAAF3Q8N9W5 541 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 MNS1Q8NEH6 495 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 PRSS33Q8NF86 280 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 OR4K2Q8NGD2 314 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 C1orf216Q8TAB5 229 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 GRK7Q8WTQ7 553 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 IFT43Q96FT9 208 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 DNAJC1Q96KC8 554 aaKnown RBP4.03□□□□□ -1.76
LIG4-201ENST00000356922 BMFQ96LC9 184 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 SMOC1Q9H4F8 434 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 IL17CQ9P0M4 197 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 MARCH4Q9P2E8 410 aaPredicted RBP4.03□□□□□ -1.76
LIG4-201ENST00000356922 FEZ2Q9UHY8 353 aaPredicted RBP4.03□□□□□ -1.76
LIG4-201ENST00000356922 AAR2Q9Y312 384 aaKnown RBP4.03□□□□□ -1.76
LIG4-201ENST00000356922 TEX264Q9Y6I9 313 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 CNOT1A5YKK6 2376 aaKnown RBP4.03□□□□□ -1.76
LIG4-201ENST00000356922 FAM186AA6NE01 2351 aa4.03□□□□□ -1.76
LIG4-201ENST00000356922 BOD1L1Q8NFC6 3051 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 PIEZO1Q92508 2521 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.02□□□□□ -1.77
LIG4-201ENST00000356922 CAPN8A6NHC0 703 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 FADS2P1A8MWK0 482 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 AXIN1O15169 862 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 ALOX15BO15296 676 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 ATG13O75143 517 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 RECQL5O94762 991 aaPredicted RBP4.02□□□□□ -1.77
LIG4-201ENST00000356922 PCDH8O95206 1070 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 APBB3O95704 486 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 IGLV3-19P01714 112 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 C6P13671 934 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 TPSB2P20231 275 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 GMPRP36959 345 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 ABCG1P45844 678 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 ARCN1P48444 511 aaKnown RBP4.02□□□□□ -1.77
LIG4-201ENST00000356922 NEK3P51956 506 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 GEMP55040 296 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 TPSAB1Q15661 275 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 KYNUQ16719 465 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 BBS9Q3SYG4 887 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 BRAT1Q6PJG6 821 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 TRMT11Q7Z4G4 463 aaKnown RBP4.02□□□□□ -1.77
LIG4-201ENST00000356922 TRIM74Q86UV6 250 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 KBTBD6Q86V97 674 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 ACVR1CQ8NER5 493 aa4.02□□□□□ -1.77
LIG4-201ENST00000356922 UHMK1Q8TAS1 419 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms