RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 SPHK2Q9NRA0 654 aa25.7■■□□□ 1.71
CLK2-201ENST00000355560 TBC1D14Q9P2M4 693 aa25.7■■□□□ 1.71
CLK2-201ENST00000355560 HEY2Q9UBP5 337 aa25.7■■□□□ 1.71
CLK2-201ENST00000355560 DNAJC16Q9Y2G8 782 aa25.7■■□□□ 1.71
CLK2-201ENST00000355560 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP25.7■■□□□ 1.7
CLK2-201ENST00000355560 SRCP12931 536 aa25.7■■□□□ 1.7
CLK2-201ENST00000355560 DGKKQ5KSL6 1271 aa25.7■■□□□ 1.7
CLK2-201ENST00000355560 ASTLQ6HA08 431 aaPredicted RBP25.7■■□□□ 1.7
CLK2-201ENST00000355560 NAPRTQ6XQN6 538 aa25.7■■□□□ 1.7
CLK2-201ENST00000355560 ATG14Q6ZNE5 492 aa25.7■■□□□ 1.7
CLK2-201ENST00000355560 TTC30BQ8N4P2 665 aa25.7■■□□□ 1.7
CLK2-201ENST00000355560 BPIFA1Q9NP55 256 aa25.7■■□□□ 1.7
CLK2-201ENST00000355560 IGSF5Q9NSI5 407 aa25.7■■□□□ 1.7
CLK2-201ENST00000355560 FKBPLQ9UIM3 349 aa25.7■■□□□ 1.7
CLK2-201ENST00000355560 ZFP69BQ9UJL9 534 aa25.7■■□□□ 1.7
CLK2-201ENST00000355560 MRPS23Q9Y3D9 190 aaKnown RBP25.7■■□□□ 1.7
CLK2-201ENST00000355560 NUMBLQ9Y6R0 609 aa25.7■■□□□ 1.7
CLK2-201ENST00000355560 TARM1B6A8C7 271 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 H0YHG0 523 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 ZNF197O14709 1029 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 STX7O15400 261 aaKnown RBP25.69■■□□□ 1.7
CLK2-201ENST00000355560 TYRP14679 529 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 CTPS1P17812 591 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 CSNK1DP48730 415 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 KPNA2P52292 529 aaKnown RBP25.69■■□□□ 1.7
CLK2-201ENST00000355560 ERVK-21P61565 698 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 ILF2Q12905 390 aaKnown RBP25.69■■□□□ 1.7
CLK2-201ENST00000355560 RYBPQ8N488 228 aaPredicted RBP25.69■■□□□ 1.7
CLK2-201ENST00000355560 OR2AP1Q8NGE2 309 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 PIH1D2Q8WWB5 315 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 SCG3Q8WXD2 468 aaKnown RBP25.69■■□□□ 1.7
CLK2-201ENST00000355560 MRPL46Q9H2W6 279 aaKnown RBP25.69■■□□□ 1.7
CLK2-201ENST00000355560 ECT2Q9H8V3 914 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 PIDD1Q9HB75 910 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 ZMYM5Q9UJ78 669 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 CORO1CQ9ULV4 474 aaPredicted RBP25.69■■□□□ 1.7
CLK2-201ENST00000355560 ZNF711Q9Y462 761 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 WNT6Q9Y6F9 365 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 PRRC2BQ5JSZ5 2229 aaKnown RBP25.69■■□□□ 1.7
CLK2-201ENST00000355560 TRAFD1O14545 582 aaPredicted RBP25.69■■□□□ 1.7
CLK2-201ENST00000355560 ALPIP09923 528 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 SERPINB3P29508 390 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 AQP5P55064 265 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 SHHQ15465 462 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 FAM83EQ2M2I3 478 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 LY6G5CQ5SRR4 150 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 ZNF549Q6P9A3 640 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 PIM3Q86V86 326 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 PAF1Q8N7H5 531 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 INTS10Q9NVR2 710 aaKnown RBP25.69■■□□□ 1.7
CLK2-201ENST00000355560 HS3ST2Q9Y278 367 aa25.69■■□□□ 1.7
CLK2-201ENST00000355560 FNDC3AQ9Y2H6 1198 aaKnown RBP25.69■■□□□ 1.7
CLK2-201ENST00000355560 DNAJC8O75937 253 aaPredicted RBP25.68■■□□□ 1.7
CLK2-201ENST00000355560 BMP1P13497 986 aa25.68■■□□□ 1.7
CLK2-201ENST00000355560 NCALDP61601 193 aa25.68■■□□□ 1.7
CLK2-201ENST00000355560 LIPMQ5VYY2 423 aa25.68■■□□□ 1.7
CLK2-201ENST00000355560 ELMSAN1Q6PJG2 1045 aa25.68■■□□□ 1.7
CLK2-201ENST00000355560 WDR75Q8IWA0 830 aaKnown RBP25.68■■□□□ 1.7
CLK2-201ENST00000355560 MRPL57Q9BQC6 102 aaKnown RBP25.68■■□□□ 1.7
CLK2-201ENST00000355560 MAGEE1Q9HCI5 957 aa25.68■■□□□ 1.7
CLK2-201ENST00000355560 YBX2Q9Y2T7 364 aaKnown RBP25.68■■□□□ 1.7
CLK2-201ENST00000355560 CXorf51AA0A1B0GTR3 108 aa25.67■■□□□ 1.7
CLK2-201ENST00000355560 HTRA2O43464 458 aaPredicted RBP25.67■■□□□ 1.7
CLK2-201ENST00000355560 H2AFYO75367 372 aaKnown RBP25.67■■□□□ 1.7
CLK2-201ENST00000355560 POU2F2P09086 479 aa25.67■■□□□ 1.7
CLK2-201ENST00000355560 LTA4HP09960 611 aaKnown RBP25.67■■□□□ 1.7
CLK2-201ENST00000355560 CCDC166P0CW27 439 aa25.67■■□□□ 1.7
CLK2-201ENST00000355560 PABPC1P11940 636 aaKnown RBP25.67■■□□□ 1.7
CLK2-201ENST00000355560 MC4RP32245 332 aa25.67■■□□□ 1.7
CLK2-201ENST00000355560 AGAP9Q5VTM2 703 aa25.67■■□□□ 1.7
CLK2-201ENST00000355560 CLNKQ7Z7G1 428 aa25.67■■□□□ 1.7
CLK2-201ENST00000355560 ITFG1Q8TB96 612 aa25.67■■□□□ 1.7
CLK2-201ENST00000355560 PPM1EQ8WY54 764 aa25.67■■□□□ 1.7
CLK2-201ENST00000355560 SMG7Q92540 1137 aaKnown RBP25.67■■□□□ 1.7
CLK2-201ENST00000355560 SKA1Q96BD8 255 aa25.67■■□□□ 1.7
CLK2-201ENST00000355560 ATP13A3Q9H7F0 1226 aa25.67■■□□□ 1.7
CLK2-201ENST00000355560 UBA6A0AVT1 1052 aaPredicted RBP25.67■■□□□ 1.7
CLK2-201ENST00000355560 SOCS5O75159 536 aa25.67■■□□□ 1.7
CLK2-201ENST00000355560 HOXB8P17481 243 aaPredicted RBP25.67■■□□□ 1.7
CLK2-201ENST00000355560 FDXRP22570 491 aa25.67■■□□□ 1.7
CLK2-201ENST00000355560 ZBTB16Q05516 673 aa25.67■■□□□ 1.7
CLK2-201ENST00000355560 HSF5Q4G112 596 aaPredicted RBP25.67■■□□□ 1.7
CLK2-201ENST00000355560 C22orf39Q6P5X5 142 aa25.67■■□□□ 1.7
CLK2-201ENST00000355560 LYSMD3Q7Z3D4 306 aa25.67■■□□□ 1.7
CLK2-201ENST00000355560 C12orf76Q8N812 135 aaPredicted RBP25.67■■□□□ 1.7
CLK2-201ENST00000355560 ANKRD49Q8WVL7 239 aa25.67■■□□□ 1.7
CLK2-201ENST00000355560 UBXN10Q96LJ8 280 aa25.67■■□□□ 1.7
CLK2-201ENST00000355560 GATA5Q9BWX5 397 aaPredicted RBP25.67■■□□□ 1.7
CLK2-201ENST00000355560 GPR63Q9BZJ6 419 aa25.67■■□□□ 1.7
CLK2-201ENST00000355560 WWP1Q9H0M0 922 aa25.67■■□□□ 1.7
CLK2-201ENST00000355560 SLC25A13Q9UJS0 675 aa25.67■■□□□ 1.7
CLK2-201ENST00000355560 MTF2Q9Y483 593 aaPredicted RBP25.67■■□□□ 1.7
CLK2-201ENST00000355560 ATG2AQ2TAZ0 1938 aa25.66■■□□□ 1.7
CLK2-201ENST00000355560 TMEM114B3SHH9 223 aa25.66■■□□□ 1.7
CLK2-201ENST00000355560 RPL26P61254 145 aaKnown RBP25.66■■□□□ 1.7
CLK2-201ENST00000355560 SNRPD1P62314 119 aaKnown RBP25.66■■□□□ 1.7
CLK2-201ENST00000355560 SIKE1Q9BRV8 207 aa25.66■■□□□ 1.7
CLK2-201ENST00000355560 RPL26L1Q9UNX3 145 aaKnown RBP25.66■■□□□ 1.7
CLK2-201ENST00000355560 PKP3Q9Y446 797 aa25.66■■□□□ 1.7
CLK2-201ENST00000355560 BNIP3LO60238 219 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms