RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 ZBTB17Q13105 803 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 EML3Q32P44 896 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 NEK10Q6ZWH5 1172 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 GAREM2Q75VX8 874 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 ERI1Q8IV48 349 aaKnown RBP10.15□□□□□ -0.78
SYNE1-203ENST00000354674 ZSCAN18Q8TBC5 510 aaPredicted RBP10.15□□□□□ -0.78
SYNE1-203ENST00000354674 OSCP1Q8WVF1 389 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 HDAC2Q92769 488 aaKnown RBP10.15□□□□□ -0.78
SYNE1-203ENST00000354674 KLF16Q9BXK1 252 aaPredicted RBP10.15□□□□□ -0.78
SYNE1-203ENST00000354674 KLC2Q9H0B6 622 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 NKX2-4Q9H2Z4 354 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 TBC1D14Q9P2M4 693 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 MFHAS1Q9Y4C4 1052 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 A0A088AWK7 358 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 C2orf78A6NCI8 922 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 WASH4PA8MWX3 477 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 MYO1DO94832 1006 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 PFKLP17858 780 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 ERCC2P18074 760 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 SSTR1P30872 391 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 GBE1Q04446 702 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 SPIDRQ14159 915 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 KRT72Q14CN4 511 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 TAF12Q16514 161 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 C5orf22Q49AR2 442 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 CCDC58Q4VC31 144 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 MS4A13Q5J8X5 152 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 SPDYCQ5MJ68 293 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 IZUMO3Q5VZ72 239 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 TAS2R42Q7RTR8 314 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 DEFB107AQ8IZN7 70 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 TNS4Q8IZW8 715 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 SLC15A4Q8N697 577 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 NATD1Q8N6N6 113 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 ATP6V0D2Q8N8Y2 350 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 PMEPA1Q969W9 287 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 PLD4Q96BZ4 506 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 C12orf43Q96C57 262 aaKnown RBP10.15□□□□□ -0.78
SYNE1-203ENST00000354674 ZFRQ96KR1 1074 aaKnown RBP10.15□□□□□ -0.78
SYNE1-203ENST00000354674 COQ7Q99807 217 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 CCDC28BQ9BUN5 200 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 C10orf88Q9H8K7 445 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 UCKL1Q9NWZ5 548 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 MSRAQ9UJ68 235 aa10.15□□□□□ -0.78
SYNE1-203ENST00000354674 TRANK1O15050 2925 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 TNFRSF10AO00220 468 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 TNFAIP8O95379 198 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 HNRNPA1P09651 372 aaKnown RBP eCLIP10.14□□□□□ -0.79
SYNE1-203ENST00000354674 CD1EP15812 388 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 ADSLP30566 484 aaPredicted RBP10.14□□□□□ -0.79
SYNE1-203ENST00000354674 KCNC3Q14003 757 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 DSG4Q86SJ6 1040 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 MIB1Q86YT6 1006 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 UNC45BQ8IWX7 931 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 HS6ST3Q8IZP7 471 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 GLIS1Q8NBF1 620 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 GOLM1Q8NBJ4 401 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 SKA1Q96BD8 255 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 TMEM121Q9BTD3 319 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 MRPS26Q9BYN8 205 aaKnown RBP10.14□□□□□ -0.79
SYNE1-203ENST00000354674 GIN1Q9NXP7 522 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 RPL26L1Q9UNX3 145 aaKnown RBP10.14□□□□□ -0.79
SYNE1-203ENST00000354674 TNRC18O15417 2968 aaPredicted RBP10.14□□□□□ -0.79
SYNE1-203ENST00000354674 DRGXA6NNA5 263 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 HACD1B0YJ81 288 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 E9PAM4 449 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 FGF10O15520 208 aaPredicted RBP10.14□□□□□ -0.79
SYNE1-203ENST00000354674 MFSD11O43934 449 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 IFNB1P01574 187 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 ZNF182P17025 639 aaPredicted RBP10.14□□□□□ -0.79
SYNE1-203ENST00000354674 GCAP28676 217 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 BMXP51813 675 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 NR1H2P55055 460 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 GAD2Q05329 585 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 HNRNPDQ14103 355 aaKnown RBP10.14□□□□□ -0.79
SYNE1-203ENST00000354674 PPM1LQ5SGD2 360 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 AFMIDQ63HM1 303 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 C3orf62Q6ZUJ4 267 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 CROCCP3Q8IVE0 287 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 MYO1HQ8N1T3 1032 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 LRGUKQ96M69 825 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 QKIQ96PU8 341 aaKnown RBP eCLIP10.14□□□□□ -0.79
SYNE1-203ENST00000354674 FERMT1Q9BQL6 677 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 HAUS8Q9BT25 410 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 HGH1Q9BTY7 390 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 PRO3102Q9H379 93 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 PCDH9Q9HC56 1237 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 TRIM39Q9HCM9 518 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 NCKIPSDQ9NZQ3 722 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 STOML2Q9UJZ1 356 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 IKBKGQ9Y6K9 419 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 CLUHO75153 1309 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 EPOPA6NHQ4 379 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 H3BUI4 141 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 PFDN6O15212 129 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 SIN3BO75182 1162 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 FGF19O95750 216 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 GLULP15104 373 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 EPCAMP16422 314 aa10.14□□□□□ -0.79
SYNE1-203ENST00000354674 PPARGP37231 505 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms