RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 ARNT2Q9HBZ2 717 aa19.58■□□□□ 0.73
COL13A1-201ENST00000354547 EGFL7Q9UHF1 273 aa19.58■□□□□ 0.73
COL13A1-201ENST00000354547 TBC1D30Q9Y2I9 924 aa19.58■□□□□ 0.73
COL13A1-201ENST00000354547 SLC12A8A0AV02 714 aa19.58■□□□□ 0.72
COL13A1-201ENST00000354547 LDB2O43679 373 aa19.58■□□□□ 0.72
COL13A1-201ENST00000354547 RAMP2O60895 175 aa19.58■□□□□ 0.72
COL13A1-201ENST00000354547 GLP2RO95838 553 aa19.58■□□□□ 0.72
COL13A1-201ENST00000354547 FAM58BPP0C7Q3 252 aa19.58■□□□□ 0.72
COL13A1-201ENST00000354547 GFAPP14136 432 aa19.58■□□□□ 0.72
COL13A1-201ENST00000354547 CKMT2P17540 419 aa19.58■□□□□ 0.72
COL13A1-201ENST00000354547 CHRM3P20309 590 aa19.58■□□□□ 0.72
COL13A1-201ENST00000354547 GRIA3P42263 894 aa19.58■□□□□ 0.72
COL13A1-201ENST00000354547 CAPRIN1Q14444 709 aaKnown RBP19.58■□□□□ 0.72
COL13A1-201ENST00000354547 SLC22A9Q8IVM8 553 aa19.58■□□□□ 0.72
COL13A1-201ENST00000354547 MPP4Q96JB8 637 aa19.58■□□□□ 0.72
COL13A1-201ENST00000354547 SLC29A1Q99808 456 aa19.58■□□□□ 0.72
COL13A1-201ENST00000354547 AURKCQ9UQB9 309 aa19.58■□□□□ 0.72
COL13A1-201ENST00000354547 TDRD15B5MCY1 1934 aaKnown RBP19.58■□□□□ 0.72
COL13A1-201ENST00000354547 CCDC162PA2VCL2 907 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 CD3EAPO15446 510 aaKnown RBP19.57■□□□□ 0.72
COL13A1-201ENST00000354547 LINC00032P0C843 101 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 GRB7Q14451 532 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 OR4D1Q15615 310 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 ARRDC2Q8TBH0 407 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 VCX3AQ9NNX9 186 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 UTP6Q9NYH9 597 aaKnown RBP19.57■□□□□ 0.72
COL13A1-201ENST00000354547 DNAJC15Q9Y5T4 150 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 SLC7A4O43246 635 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 RPL5P46777 297 aaKnown RBP19.57■□□□□ 0.72
COL13A1-201ENST00000354547 YBX1P67809 324 aaKnown RBP19.57■□□□□ 0.72
COL13A1-201ENST00000354547 CST9Q5W186 159 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 BEND5Q7L4P6 421 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 FUNDC1Q8IVP5 155 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 FBXO32Q969P5 355 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 SLC39A13Q96H72 371 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 SLC25A23Q9BV35 468 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 MFSD1Q9H3U5 465 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 PIP5K1BO14986 540 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 AKAP10O43572 662 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 NDST2P52849 883 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 ZNF235Q14590 738 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 SCIMPQ6UWF3 145 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 LARP4Q71RC2 724 aaKnown RBP eCLIP19.57■□□□□ 0.72
COL13A1-201ENST00000354547 RETREG3Q86VR2 466 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 SLCO4A1Q96BD0 722 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 PRICKLE1Q96MT3 831 aaPredicted RBP19.57■□□□□ 0.72
COL13A1-201ENST00000354547 CYP2S1Q96SQ9 504 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 ATP13A1Q9HD20 1204 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 PRDM5Q9NQX1 630 aaPredicted RBP19.57■□□□□ 0.72
COL13A1-201ENST00000354547 VPS45Q9NRW7 570 aa19.57■□□□□ 0.72
COL13A1-201ENST00000354547 DDX18Q9NVP1 670 aaKnown RBP19.57■□□□□ 0.72
COL13A1-201ENST00000354547 TSR3Q9UJK0 312 aaKnown RBP19.57■□□□□ 0.72
COL13A1-201ENST00000354547 A0A1B0GTL3 188 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 H3BMM5 538 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 TNFAIP8O95379 198 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 ATXN1LP0C7T5 689 aaKnown RBP19.56■□□□□ 0.72
COL13A1-201ENST00000354547 ZNF26P17031 533 aaPredicted RBP19.56■□□□□ 0.72
COL13A1-201ENST00000354547 PSMC3P17980 439 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 HTR7P34969 479 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 KCNA10Q16322 511 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 C17orf99Q6UX52 265 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 GRIN3AQ8TCU5 1115 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 TUBGCP3Q96CW5 907 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 SEMA4BQ9NPR2 832 aaPredicted RBP19.56■□□□□ 0.72
COL13A1-201ENST00000354547 MARCH2Q9P0N8 246 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 SUCOQ9UBS9 1254 aaKnown RBP19.56■□□□□ 0.72
COL13A1-201ENST00000354547 A0A0J9YYE9 177 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 FAM149AA5PLN7 773 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 MROH6A6NGR9 719 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 CDK14O94921 469 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 UGT1A6P19224 532 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 RHDQ02161 417 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 ARMC3Q5W041 872 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 IFNEQ86WN2 208 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 LRRC49Q8IUZ0 686 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 CANT1Q8WVQ1 401 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 ESAMQ96AP7 390 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 RPL10LQ96L21 214 aaKnown RBP19.56■□□□□ 0.72
COL13A1-201ENST00000354547 C1orf74Q96LT6 269 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 SEPT5Q99719 369 aaPredicted RBP19.56■□□□□ 0.72
COL13A1-201ENST00000354547 SPON2Q9BUD6 331 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 TMEM248Q9NWD8 314 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 TIMM22Q9Y584 194 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 COMMD3-BMI1R4GMX3 469 aa19.56■□□□□ 0.72
COL13A1-201ENST00000354547 A0A0D9SEW6 157 aa19.55■□□□□ 0.72
COL13A1-201ENST00000354547 TRIM24O15164 1050 aa19.55■□□□□ 0.72
COL13A1-201ENST00000354547 PIM1P11309 404 aaPredicted RBP19.55■□□□□ 0.72
COL13A1-201ENST00000354547 CD1DP15813 335 aa19.55■□□□□ 0.72
COL13A1-201ENST00000354547 FMO4P31512 558 aa19.55■□□□□ 0.72
COL13A1-201ENST00000354547 HERVK_113P63132 956 aa19.55■□□□□ 0.72
COL13A1-201ENST00000354547 FKBP1BP68106 108 aa19.55■□□□□ 0.72
COL13A1-201ENST00000354547 RPS6KA2Q15349 733 aa19.55■□□□□ 0.72
COL13A1-201ENST00000354547 DHFR2Q86XF0 187 aa19.55■□□□□ 0.72
COL13A1-201ENST00000354547 TRIB2Q92519 343 aa19.55■□□□□ 0.72
COL13A1-201ENST00000354547 ERVK-6Q9BXR3 956 aa19.55■□□□□ 0.72
COL13A1-201ENST00000354547 GABRQQ9UN88 632 aa19.55■□□□□ 0.72
COL13A1-201ENST00000354547 SCML2Q9UQR0 700 aa19.55■□□□□ 0.72
COL13A1-201ENST00000354547 A0A0U1RQS6 177 aa19.55■□□□□ 0.72
COL13A1-201ENST00000354547 SAC3D1A6NKF1 404 aa19.55■□□□□ 0.72
COL13A1-201ENST00000354547 RPL10P27635 214 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms